ENST00000585863.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000585863.1 |
Source |
Gencode19 |
Same with |
NONHSAT056089 |
Classification |
intergenic |
Length |
2270 nt |
Genomic location |
chr17+:74795126..74802035 |
Exon number |
2 |
Exons |
74795126..74795626,74800267..74802035 |
Genome context |
|
Sequence |
000001 AAAGAAAATA TGGAAATGCA ATAGATTCAG AATCATAAGA TGTAGACACA GAAGGAATCT TGGAGAACAT TTAAAACTTA 000080
000081 GGGAACTCTT GAGACAAAAT CTCACTCTGT CACCCAGGCT GGAGTGCATT GTCACGATCT TGGCTCACTG TAACCCCTGC 000160 000161 CTCCCAGTTC AAGCAACTCT CGTGCCTCAG CCTCCCAAGT AGCTGGGATT ATAGGTGCCC ACCACAATGC CTGGCTAATT 000240 000241 TTTGTAGTTT TAGTAGAGAT GGGCTTTCAC CATGTTGGCC AGGCTGGTCT CGAACTCCTG ACCTCAAGTG ATCCACACAC 000320 000321 CTCAGCCTCC CAAAGTGCTG GGATTACAGG TGTGAGCCAC CACGTCCTGC CTTATTATTA TTTTTGAGAC ACAGTCTTGC 000400 000401 TCTGTCACGC AGGCTGGAGC CATGTCAGCT CAATGCAACC TCTGCCCCCC TGGATTCAAG CAGTTCTCCT GCCTTGGCCT 000480 000481 CCTGAGTAGC TGGGATTACA GTCTTGCTCT GTCAACCAGG TTGGAGTGCA GCGGCGCAAT CTTGGCTCAC TGCAACCTCT 000560 000561 GCCTCCCGGG TTCAAGTGAT TCTCCTGCCT CAGCCTCCCA AGCAGCTGGT ATTACAGGTG CCCGCCACCA CGCCCAGCTA 000640 000641 ATTTTTGTAT TTTTAGGAGA GACAGAGTTT CACCATCTCG GACAGACTGG TCTTGAACTC CTGACCTCGT GATCCACCTG 000720 000721 CCTTGGCCTC CCAAAGTGCT GGGAAATGAC AGGTATGAGC CACTGCGCCT GGCCAGTGAT CTCTTCTTAC TGCACTCTGT 000800 000801 GACTTGCCTT GAATTCCTTC CTGCACAAGA TCCAGGAACC CTCCCTTAGG GTCTGGGTAG GGACCCCTTT TTCTGGCAAC 000880 000881 AGAGACTTTA AATACTTTTA TGACTGCCTC TGATAGATTG TTCTACACAT CTGTCCTTTT TGTTAACATG ATTATAGGAA 000960 000961 ATGTAATTTA GGGCACCAAG AGAAGATCTA TTCACGGAAC ACAGGAGTGA ATACACACTG CCTCTGTATT GATGGAACTC 001040 001041 ATGCTGGGCC ATTAAGTATT TATCCATGTA TGCAAATGAG CATTGTTTTC AAGATATTGA GCCTCTCCTA CCTTTCCTTC 001120 001121 TAACTGATCC AAATCAGAAT AACCTGATTG GTGAGCTGAG CTTCACCTCT AACTTGACTT GTTGTTGTGC TGCTATTGGT 001200 001201 AATGAGGTGA TACTAAGGGA CTTTTTATGT TGATAGTGTG AGCGTCTCAC ATGCATGGGA TAGGTAGGGT ATGTGGGCCC 001280 001281 TGGGTTTTGA CTAGGTGAGA TGCGAGGAAA TACTTTTTTC TCTTTTTTTT TTTTTTTTTT TGAGATAGAG TTTCGTTCTT 001360 001361 GTTGCCCAGG CTGGAGTGCA ATGGTGCGAT CTCAGCTCAC TGCAGCTTCC ACTTCCTGGG TTTAAGCGAT TCTCCTGCCT 001440 001441 CAGCCTCCTG AGTAGCTGAG ATTACAGGCA CCTGCCACCA CTCCCGGCTA ATTTTTTGTA TTTTTAGTAG AAACAGGGTT 001520 001521 TCACCATTTT GGACAGGCTG GTCTCAAACT CCTGGCCTCT GGTGATCTGC CTGCCTTGGC CTCGCAAAGT GCTGGGATTA 001600 001601 CAGGCATGAG CCACTGTGCC TGGCCTTTTT TTTTTTTTTC ACCATTTTTT GAGACGGGGT TTCACTCTGG CCCAGGGTGG 001680 001681 AGTGCAGTGG GACTACAGGC ATATGCCACC ATGCCCGGCT AAATTTTGTA TTTTTTAGTA GAGATGGGGT TTCACCATGT 001760 001761 TAGCTAGGCT GATCTCGAAC TTCTGACCTC ATGCGACTCA CCAGCCTCGG CCTCTCAAAG TGCTGGGATT ACAGGCATGA 001840 001841 GCCACCACGC CTTGCCAGAT ATGAGGAAAT ACTACCCACT TTGGCAGAGT GCTTTATCCT TGCTAAAATA CCTTACCCCA 001920 001921 AATGCAAGAA ACAAATCTTA TTCCTGTTTG TTTTTTGAGA CGGAGTTTGC TCTTGTTGCC CAGACTGGAG TGCAACTGCG 002000 002001 TGATCTCAGC TCACCGCAAC CTCTGCCTCC TGGTTTCAAA CCATTCTCCC ACCTCAGCCT CCCGAGTAGC TGGGATTACA 002080 002081 GGCATGCTCC AGCATGCCTG GCTAATTTTA TATTTTTAGT AGAGACGGGG TTTCTCCATG TTGGTCAGGC TGGTCTCGAA 002160 002161 CTCCCGACAT CAGGTGATCC GCCTGCCTTG GCCTCCCAAA GTGCTGAGAT TACAGGTGTG AGCCACCACG CCCGGCCCTT 002240 002241 ATTCCTGTTA TTATGTGCAG ATATTGAGAG |
Predicted Small Protein
Name | ENST00000585863.1_smProtein_1790:1957 |
Length | 56 |
Molecular weight | 6587.8841 |
Aromaticity | 0.145454545455 |
Instability index | 51.9709090909 |
Isoelectric point | 9.21722412109 |
Runs | 7 |
Runs residual | 0.0242424242424 |
Runs probability | 0.0219042571984 |
Amino acid sequence | MRLTSLGLSKCWDYRHEPPRLARYEEILPTLAECFILAKIPYPKCKKQILFLFVF |
Secondary structure | LEEELLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHLLLLLLLLLLEEEEEEL |
PRMN | - |
PiMo | - |