ENST00000591699.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000591699.1 |
Source |
Gencode19 |
Same with |
, |
Classification |
intergenic |
Length |
3229 nt |
Genomic location |
chr19+:4910379..4961143 |
Exon number |
16 |
Exons |
4910379..4911050,4929234..4929488,4930728..4930888,4932753..4932968,4941540..4941640,4941757..4941943,4944144..4944267,4944355..4944462,4945873..4945977,4947117..4947223,4950623..4950785,4950871..4951008,4954362..4954500,4954662..4954833,4956720..4956824,4960668..4961143 |
Genome context |
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Sequence |
000001 TGGGCACCGA GGGGTCCCGG GGTCCGCGGA TCTCGGGTGG GGTTTTTCCC TCTCAGTGGC ACTTGGTTGA GTTCCCCCGG 000080
000081 GACTTCTGAA GTTCCGGCCC GCGCTGGACT TCTGGGATTC CCTCTTCCGT AAATAGGAAT CCGAGGAATG AATGAATCAA 000160 000161 TGAATGAATG AATAAACGAA CCAACTCGGC CACTTGGCCC GGGCCTCCTT TCTCCTCTGG TCGTGGGGAA GGAGGGATGG 000240 000241 GTTGGACCTT CTGCTTTTCT TTCAATTCCC TCTTTTCATT CTCCTTCCTC CTCAATCTTC AACACTTGGC TAGTCGTTAA 000320 000321 TGCCTTAAGT GCTTAATTTG TTGTGTCTGG TCCTGGCCAG GGTCTGGCTG TACAGGAGGA CTGGAAGGGC ATCCTGGGAG 000400 000401 TTTCCTGGTG TCCACAGGCC GGACAAAAGC AACCCCGACT CCTTAGAGCA TGGCATGGCT CAGAGGTGCT GGTAAAACTG 000480 000481 ATGGGGGTTT TTGCTGTCCC TCCCCTCAGC GCCGACACCA TGTGGATCCA GGTTCGGACC ATGGACGGGA GGCAGACCCA 000560 000561 CACGGTGGAC TCGCTGTCCA GGCTGACCAA GGTGGAGGAG CTGAGGCGGA AGATCCAGGA GCTGTTCCAC GTGGAGCCAG 000640 000641 GCCTGCAGAG GCTGTTCTAC AGGGGCAAAC AGATGGAGGA CGGCCATACC CTCTTCGACT ACGAGGTCCG CCTGAATGAC 000720 000721 ACCATCCAGC TCCTGGTCCG CCAGAGCCTC GTGCTCCCCC ACAGCACCAA GGAGCGGGAC TCCGAGCTCT CCGACACCGA 000800 000801 CTCCGGCTGC TGCCTGGGCC AGAGTGAGTC AGACAAGTCC TCCACCCACG GTGAGGCGGC CGCCGAGACT GACAGCAGGC 000880 000881 CAGCCGATGA GGACATGTGG GATGAGACGG AATTGGGGCT GTACAAGGTC AATGAGTACG TCGATGCTCG GGACACGAAC 000960 000961 ATGGGGGCGT GGTTTGAGGC GCAGGTGGTC AGGGTGACGC GGAAGGCCCC CTCCCGGGAC GAGCCCTGCA GCTCCACGTC 001040 001041 CAGGCCGGCG CTGGAGGAGG ACGTCATTTA CCACGTGAAA TACGACGACT ACCCGGAGAA CGGCGTGGTC CAGATGAACT 001120 001121 CCAGGGACGT CCGAGCGCGC GCCCGCACCA TCATCAAGTG GCAGGACCTG GAGGTGGGCC AGGTGGTCAT GCTCAACTAC 001200 001201 AACCCCGACA ACCCCAAGGA GCGGGGCTTC TGGTACGACG CGGAGATCTC CAGGAAGCGC GAGACCAGGA CGGCGCGGGA 001280 001281 ACTCTACGCC AACGTGGTGC TGGGGGATGA TTCTCTGAAC GACTGTCGGA TCATCTTCGT GGACGAAGTC TTCAAGATTG 001360 001361 AGCGGCCGGG TGAAGGGAGC CCCATGGTTG ACAACCCCAT GAGACGGAAG AGCGGGCCGT CCTGCAAGCA CTGCAAGGAC 001440 001441 GACGTGAACA GACTCTGCCG GGTCTGCGCC TGCCACCTGT GCGGGGGCCG GCAGGACCCC GACAAGCAGC TCATGTGCGA 001520 001521 TGAGTGCGAC ATGGCCTTCC ACATCTACTG CCTGGACCCG CCCCTCAGCA GTGTTCCCAG CGAGGACGAG TGGTACTGCC 001600 001601 CTGAGTGCCG GAATGATGCC AGCGAGGTGG TACTGGCGGG AGAGCGGCTG AGAGAGAGCA AGAAGAAGGC GAAGATGGCC 001680 001681 TCGGCCACAT CGTCCTCACA GCGGGACTGG GGCAAGGGCA TGGCCTGTGT GGGCCGCACC AAGGAATGTA CCATCGTCCC 001760 001761 GTCCAACCAC TACGGACCCA TCCCGGGGAT CCCCGTGGGC ACCATGTGGC GGTTCCGAGT CCAGGTCAGC GAGTCGGGTG 001840 001841 TCCATCGGCC CCACGTGGCT GGCATACACG GCCGGAGCAA CGACGGAGCG TACTCCCTAG TCCTGGCGGG GGGCTATGAG 001920 001921 GATGATGTGG ACCATGGGAA TTTTTTCACA TACACGGGTA GTGGTGGTCG AGATCTTTCC GGCAACAAGA GGACCGCGGA 002000 002001 ACAGTCTTGT GATCAGAAAC TCACCAACAC CAACAGGGCG CTGGCTCTCA ACTGCTTTGC TCCCATCAAT GACCAAGAAG 002080 002081 GGGCCGAGGC CAAGGACTGG CGGTCGGGGA AGCCGGTCAG GGTGGTGCGC AATGTCAAGG GTGGCAAGAA TAGCAAGTAC 002160 002161 GCCCCCGCTG AGGGCAACCG CTACGATGGC ATCTACAAGG TTGTGAAATA CTGGCCCGAG AAGGGGAAGT CCGGGTTTCT 002240 002241 CGTGTGGCGC TACCTTCTGC GGAGGGACGA TGATGAGCCT GGCCCTTGGA CGAAGGAGGG GAAGGACCGG ATCAAGAAGC 002320 002321 TGGGGCTGAC CATGCAGTAT CCAGAAGGCT ACCTGGAAGC CCTGGCCAAC CGAGAGCGAG AGAAGGAGAA CAGCAAGAGG 002400 002401 GAGGAGGAGG AGCAGCAGGA GGGGGGCTTC GCGTCCCCCA GGACGGGCAA GGGCAAGTGG AAGCGGAAGT CGGCAGGAGG 002480 002481 TGGCCCGAGC AGGGCGGGTC CCCGCGCCGG ACATCCAAGA AAACCAAGGT GGAGCCCTAC AGTCTCACGG CCCAGCAGAG 002560 002561 CAGCCTCATC AGAGAGGACA AGAGCAACGC CAAGCTGTGG AATGAGGTCC TGGCGTCACT CAAGGACCGG CCGGCGAGCG 002640 002641 GCAGCCCGTT CCAGTTGTTC CTGAGTAAAG TGGAGGAGAC GTTCCAGTGT ATCTGCTGTC AGGAGCTGGT GTTCCGGCCC 002720 002721 ATCACGACCG TGTGCCAGCA CAACGTGTGC AAGGACTGCC TGGACAGATC CTTTCGGGCA CAGGTGTTCA GCTGCCCTGC 002800 002801 CTGCCGCTAC GACCTGGGCC GCAGCTATGC CATGCAGGTG AACCAGCCTC TGCAGACCGT CCTCAACCAG CTCTTCCCCG 002880 002881 GCTACGGCAA TGGCCGGTGA TCTCCAAGCA CTTCTCGACA GGCGTTTTGC TGAAAACGTG TCGGAGGGCT CGTTCATCGG 002960 002961 CACTGATTTT GTTCTTAGTG GGCTTAACTT AAACAGGTAG TGTTTCCTCC GTTCCCTAAA AAGGTTTGTC TTCCTTTTTT 003040 003041 TTTTTATTTT TATTTTTCAA ATCTATACAT TTTCAGGAAT TTATGTATTC TGGCTAAAAG TTGGACTTCT CAGTATTGTG 003120 003121 TTTAGTTCTT TGAAAACATA AAAGCCTGCA ATTTCTCGAC AAAACAACAC AAGATTTTTT AAAGATGGAA TCAGAAACTA 003200 003201 CGTGGTGTGG AGGCTGTTGA TGTTTCTGG |
Predicted Small Protein
Name | ENST00000591699.1_smProtein_449:718 |
Length | 90 |
Molecular weight | 9184.9532 |
Aromaticity | 0.0337078651685 |
Instability index | 51.695505618 |
Isoelectric point | 6.04193115234 |
Runs | 14 |
Runs residual | 0.0141000220313 |
Runs probability | 0.0364334923159 |
Amino acid sequence | MAWLRGAGKTDGGFCCPSPQRRHHVDPGSDHGREADPHGGLAVQADQGGGAEAEDPGAVP RGARPAEAVLQGQTDGGRPYPLRLRGPPE |
Secondary structure | LLEEELLLLLLLLEELLLLLLEEELLLLLLLLLLLLLLLLEEEEELLLLLEEEELLLLLL LLLLLHHHEEELLLLLLLLLLLLLLLLLL |
PRMN | - |
PiMo | - |