ENST00000593022.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

ENST00000593022.1

Source

Gencode19

Same with

NONHSAT000135

Classification

intergenic

Length

693 nt

Genomic location

chr1+:719750..741839

Exon number

4

Exons

719750..719873,739299..739602,740156..740346,741766..741839

Genome context

Sequence
000001 CTCTGTTCAC GGAAAGGGCC TGGGAGCTGC AACACCTCAA CAGCAACAAG CACACCTGCT ACCTAGAACT TGGTTTCTAA 000080
000081 AAACCATCCT CCTCTAAAAG GAAACAGAGC TCTTTGAAGA AACGCAGAAG GTAAGCATGA GCAAATTACT TTTTAGAGGT 000160
000161 AACTTTGCTG AACTTGTGAA GAATGGTGTG CAAGGTCCAG AGCGACTGCA GGAGAGGGAA GGTGGGATTC CCACAGAGCA 000240
000241 GGAGCACAGA TAAGCCAAGC AAGGCCCTGC TTGGAAGGCA GCAATCAACA GAGATGCACA GACCTGTGAG GGTGCCGGGA 000320
000321 CAGCCATGCA ACAATGCAGC CCTTTTGCTT CCTGAGCTCA CCAGTTCCCT CGCTCCACCT CTGAGAGGTG GTTTGGAGAA 000400
000401 ACACAGCCCT TCTCAAGAGG GCTGCAAGCT ACTTAAGTCC TGAAAATTTC CACAAGGCTG AGTCAAATCT GCGTTTCATC 000480
000481 ATCTATAAGA AAGGTACCTA TCGAGAACAC CCTGCTGGCC AGTGTGTAAA TATCTAAAGG AGGACTCAGA AAACACCGGG 000560
000561 GAAGTCCAGC CTGCACGTGG TGGCTGGGCT TCAGTGAAGC ATGCAGCACA ACAGGAGTTA GCAGCCATGC ACTGCCCAGG 000640
000641 CTGGAAGTAT GCTCAACCAC AAGGGTCAGG GCTGGGAGAG GCGCTTCGGT AGC
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Predicted Small Protein

Name ENST00000593022.1_smProtein_182:442
Length 87
Molecular weight 9320.7293
Aromaticity 0.0116279069767
Instability index 84.1197674419
Isoelectric point 9.95892333984
Runs 13
Runs residual 0.0115411315515
Runs probability 0.0319663554958
Amino acid sequence MVCKVQSDCRRGKVGFPQSRSTDKPSKALLGRQQSTEMHRPVRVPGQPCNNAALLLPELT
SSLAPPLRGGLEKHSPSQEGCKLLKS
Secondary structure LEEEEELLLLLLLLLLLLLLLLLLHHHHHHLLLLLLLLLLLLLLLLLLLLHHHHHLHHHL
LLLLLLLLLLLEELLLLHHHLLLLLL
PRMN -
PiMo -