ENST00000593022.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000593022.1 |
Source |
Gencode19 |
Same with |
NONHSAT000135 |
Classification |
intergenic |
Length |
693 nt |
Genomic location |
chr1+:719750..741839 |
Exon number |
4 |
Exons |
719750..719873,739299..739602,740156..740346,741766..741839 |
Genome context |
|
Sequence |
000001 CTCTGTTCAC GGAAAGGGCC TGGGAGCTGC AACACCTCAA CAGCAACAAG CACACCTGCT ACCTAGAACT TGGTTTCTAA 000080
000081 AAACCATCCT CCTCTAAAAG GAAACAGAGC TCTTTGAAGA AACGCAGAAG GTAAGCATGA GCAAATTACT TTTTAGAGGT 000160 000161 AACTTTGCTG AACTTGTGAA GAATGGTGTG CAAGGTCCAG AGCGACTGCA GGAGAGGGAA GGTGGGATTC CCACAGAGCA 000240 000241 GGAGCACAGA TAAGCCAAGC AAGGCCCTGC TTGGAAGGCA GCAATCAACA GAGATGCACA GACCTGTGAG GGTGCCGGGA 000320 000321 CAGCCATGCA ACAATGCAGC CCTTTTGCTT CCTGAGCTCA CCAGTTCCCT CGCTCCACCT CTGAGAGGTG GTTTGGAGAA 000400 000401 ACACAGCCCT TCTCAAGAGG GCTGCAAGCT ACTTAAGTCC TGAAAATTTC CACAAGGCTG AGTCAAATCT GCGTTTCATC 000480 000481 ATCTATAAGA AAGGTACCTA TCGAGAACAC CCTGCTGGCC AGTGTGTAAA TATCTAAAGG AGGACTCAGA AAACACCGGG 000560 000561 GAAGTCCAGC CTGCACGTGG TGGCTGGGCT TCAGTGAAGC ATGCAGCACA ACAGGAGTTA GCAGCCATGC ACTGCCCAGG 000640 000641 CTGGAAGTAT GCTCAACCAC AAGGGTCAGG GCTGGGAGAG GCGCTTCGGT AGC |
Predicted Small Protein
Name | ENST00000593022.1_smProtein_182:442 |
Length | 87 |
Molecular weight | 9320.7293 |
Aromaticity | 0.0116279069767 |
Instability index | 84.1197674419 |
Isoelectric point | 9.95892333984 |
Runs | 13 |
Runs residual | 0.0115411315515 |
Runs probability | 0.0319663554958 |
Amino acid sequence | MVCKVQSDCRRGKVGFPQSRSTDKPSKALLGRQQSTEMHRPVRVPGQPCNNAALLLPELT SSLAPPLRGGLEKHSPSQEGCKLLKS |
Secondary structure | LEEEEELLLLLLLLLLLLLLLLLLHHHHHHLLLLLLLLLLLLLLLLLLLLHHHHHLHHHL LLLLLLLLLLLEELLLLHHHLLLLLL |
PRMN | - |
PiMo | - |