ENST00000598229.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

ENST00000598229.1

Source

Gencode19

Same with

NONHSAT035057

Classification

intergenic

Length

735 nt

Genomic location

chr13+:106413678..106416591

Exon number

2

Exons

106413678..106413909,106416089..106416591

Genome context

Sequence
000001 TTCAGGGATC GAGTAATCTG CCAAGCAAGA GTTTATTCAA GCACAGTTTG AAATAAAGGT TTCAAATGCA TAGCCTGTCG 000080
000081 ATACTTTGGA AGGATTCTCA TCATAACGAG TATGCAATTT GCTATAAAGA AGAATGCCCA TTACGGACTA AATGTTTATG 000160
000161 TCCTCCTAAA ATTCATATGT TGAAGGCCTA ACTCTCAATG TGATGATTAT GTGGAGATGG TGCCTTTGGG AGGATATGGG 000240
000241 AGGACACCTG AGACGGCAGG CCAGAAGTCA CTCAGTAGGA GAAACATCCG TTAGAAGTAA TAATGTGGGA TTGCTGAAGT 000320
000321 AAAGACTATA GGAAGAAAAA AGTGTCTGTG TGTAGGAAAC GGAAAGGGAG AGAAAAATAC ACTGAGATGG TAAAGTAAGG 000400
000401 AAGTGGAAGA TCAGCAGAAT GTGCAGATGC CAAGCCATCC AAGAAAATCA TCTCTTGTGA TTGTTGCGAA GTCAACTAGC 000480
000481 TAATGTGACT CACTGCTAGG CTGTTGGATC TGAGACTTAT GTGGGATAAT TTAGAAACTT GCTAGTGTCT TAAGATCAAT 000560
000561 TACTCACCAA TGAGAGTGGC ATTGAACTGT GAATGTTCCT CCTAGATTTT CCATGAAGAC TAATGGTTTT GTCTTGTCTT 000640
000641 GAATTTGTTT TAATTACAAT TTGTATACAT CCTGTTCCAC CCTGAAATTT TTATTTTCCA AATGGTTTTT CATTTAAAGA 000720
000721 GACTAAATAA AGGTT
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Predicted Small Protein

Name ENST00000598229.1_smProtein_65:190
Length 42
Molecular weight 4868.7696
Aromaticity 0.0731707317073
Instability index 91.4731707317
Isoelectric point 8.43878173828
Runs 8
Runs residual 0.0191530749663
Runs probability 0.0230414237768
Amino acid sequence MHSLSILWKDSHHNEYAICYKEECPLRTKCLCPPKIHMLKA
Secondary structure LLLLLEEELLLLLLHHHEEELLLLLLLLLLLLLLLLEEELL
PRMN -
PiMo -