ENST00000598229.1
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
ENST00000598229.1 |
Source |
Gencode19 |
Same with |
NONHSAT035057 |
Classification |
intergenic |
Length |
735 nt |
Genomic location |
chr13+:106413678..106416591 |
Exon number |
2 |
Exons |
106413678..106413909,106416089..106416591 |
Genome context |
|
Sequence |
000001 TTCAGGGATC GAGTAATCTG CCAAGCAAGA GTTTATTCAA GCACAGTTTG AAATAAAGGT TTCAAATGCA TAGCCTGTCG 000080
000081 ATACTTTGGA AGGATTCTCA TCATAACGAG TATGCAATTT GCTATAAAGA AGAATGCCCA TTACGGACTA AATGTTTATG 000160 000161 TCCTCCTAAA ATTCATATGT TGAAGGCCTA ACTCTCAATG TGATGATTAT GTGGAGATGG TGCCTTTGGG AGGATATGGG 000240 000241 AGGACACCTG AGACGGCAGG CCAGAAGTCA CTCAGTAGGA GAAACATCCG TTAGAAGTAA TAATGTGGGA TTGCTGAAGT 000320 000321 AAAGACTATA GGAAGAAAAA AGTGTCTGTG TGTAGGAAAC GGAAAGGGAG AGAAAAATAC ACTGAGATGG TAAAGTAAGG 000400 000401 AAGTGGAAGA TCAGCAGAAT GTGCAGATGC CAAGCCATCC AAGAAAATCA TCTCTTGTGA TTGTTGCGAA GTCAACTAGC 000480 000481 TAATGTGACT CACTGCTAGG CTGTTGGATC TGAGACTTAT GTGGGATAAT TTAGAAACTT GCTAGTGTCT TAAGATCAAT 000560 000561 TACTCACCAA TGAGAGTGGC ATTGAACTGT GAATGTTCCT CCTAGATTTT CCATGAAGAC TAATGGTTTT GTCTTGTCTT 000640 000641 GAATTTGTTT TAATTACAAT TTGTATACAT CCTGTTCCAC CCTGAAATTT TTATTTTCCA AATGGTTTTT CATTTAAAGA 000720 000721 GACTAAATAA AGGTT |
Predicted Small Protein
Name | ENST00000598229.1_smProtein_65:190 |
Length | 42 |
Molecular weight | 4868.7696 |
Aromaticity | 0.0731707317073 |
Instability index | 91.4731707317 |
Isoelectric point | 8.43878173828 |
Runs | 8 |
Runs residual | 0.0191530749663 |
Runs probability | 0.0230414237768 |
Amino acid sequence | MHSLSILWKDSHHNEYAICYKEECPLRTKCLCPPKIHMLKA |
Secondary structure | LLLLLEEELLLLLLHHHEEELLLLLLLLLLLLLLLLEEELL |
PRMN | - |
PiMo | - |