ENST00000601034.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000601034.1 |
Source |
Gencode19 |
Same with |
NONHSAT033932 |
Classification |
intergenic |
Length |
820 nt |
Genomic location |
chr13+:52028304..52036761 |
Exon number |
2 |
Exons |
52028304..52028465,52036104..52036761 |
Genome context |
|
Sequence |
000001 GGGAGGGAAG GCACTCTCTG TCAAGCTGCT GTCACCTTAC CTGAAGTAAG GAGTCCACGC CTGCATGTCC GAGGAAAACA 000080
000081 GTTTTCTCAA ACACATTAGT TGAAAAACTG AAGACGCTGC CTAAAATACA AGCTGAGTTA GAGACAGCCC TTGTAAGACT 000160 000161 AGATGGAATC TCATTCTGTA GCCTAGGCTG GAGTGCAGTG GCACAATCTG GTCACTACAA CCTCTGCCTC CCAGGTTCAA 000240 000241 GCAATCCTTG TGTCTCAGCC TTCCAAGTAG CTGGGATTAC AGGCATGCAC CACCACACTC AGCTAATTTT TGTGTTTTTA 000320 000321 GTAGAGATAG GGTTTTGCCA TGTTGCCCAG GCTGGTCTCA AACTCCTTGA CTCAAGTGAC CCACCCTCAG CCTCCCAAAG 000400 000401 TGCTGGGAGC CACCGCGTGA GCCACAGTGC CCAGTTGACA ATTTCTGCAT TAATCCACAG AACACATAAA AGCACTGTGG 000480 000481 AAGTGGCAAC AGGGAAGGTG AGAAGAGGAT TATCAAAGAC ATTGTGATGA TAGAATGGAC AGGACTTGGT GAACTGAGTT 000560 000561 GATGCAGGCA GAATCATGAT ATTGTGTGAT TAAAGCCATC TTGTGTCATA TAAGGTGAAT ATCATCAAGC TACTGATAAT 000640 000641 TGTAAATTCT AATAAGATGT ATAACTCATT TCTAAAGGAC AAATGGTGTT TATTCAGTCA TTTGCTTAAC AAATATTTAT 000720 000721 TGAATGTCTA CTGTGTGTAG GAGCTGGGAA TGTAGGAATG AATAAAACGG GAAATAATGC CTGTCCTTAT GAAGTTTACA 000800 000801 TTCTAGTGGG AGAGGTAGAC |
Predicted Small Protein
Name | ENST00000601034.1_smProtein_284:526 |
Length | 81 |
Molecular weight | 8635.8133 |
Aromaticity | 0.0375 |
Instability index | 44.4575 |
Isoelectric point | 10.0205688477 |
Runs | 12 |
Runs residual | 0.0111842105263 |
Runs probability | 0.0417181887771 |
Amino acid sequence | MHHHTQLIFVFLVEIGFCHVAQAGLKLLDSSDPPSASQSAGSHRVSHSAQLTISALIHRT HKSTVEVATGKVRRGLSKTL |
Secondary structure | LLLLEEEEEEEEEEELHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHH LLLEEEEELLEEHHHHHLLL |
PRMN | - |
PiMo | - |