ENST00000604215.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000604215.1 |
Source |
Gencode19 |
Same with |
NONHSAT075800 |
Classification |
antisense |
Length |
520 nt |
Genomic location |
chr2+:179441830..179442349 |
Exon number |
1 |
Exons |
179441830..179442349 |
Genome context |
|
Sequence |
000001 CAAGTATATA GGACTTAATT GGTGAGCCGC CATCTTCCAA GGGAGGTGTC CATGTAAGTG TTGCTTTTTC AGCAGAAACA 000080
000081 TTACTGATTT CAACAGGACC TGGGGGACCA GGTACATCAA GGACTGTTAC CTTCACATGT TCCACCTTCG TGCCAAAAGG 000160 000161 ATTGGTAGCA GTGATGGTAT ATTCACCCGC ATCTTTTCTA GTGGCATACT TGATAGTAAG CATGGAAGAT GTTGGGGTTG 000240 000241 AAGTTATCTG AGTGATATCT GATGGTCTAA TGTCTTTTCC TGCCTTGGAC CAACTTGATT TTGGAAGGGG TTTGCCAAGA 000320 000321 ATGCTAATGG CATTCAAAAC AATGGTATCC CCTGCTTTAA TTGTTAGCCC ATCTTTTATT GTGGGATCAA GGACAATTGT 000400 000401 TGGTGCCTCT GCAAAGAAAA AAATACATTT TAATCAGAAA AGGAAGGAGG CTTAATTTGC TTTAAAAAAA AAAGTACATA 000480 000481 AAAAGTAAAA TGGACCTACC GTATTCATCC TTGCAAATAA |
Predicted Small Protein
Name | ENST00000604215.1_smProtein_269:454 |
Length | 62 |
Molecular weight | 6721.9814 |
Aromaticity | 0.0819672131148 |
Instability index | 40.7737704918 |
Isoelectric point | 11.0969848633 |
Runs | 15 |
Runs residual | 0.0930846052384 |
Runs probability | 0.0291114644056 |
Amino acid sequence | MSFPALDQLDFGRGLPRMLMAFKTMVSPALIVSPSFIVGSRTIVGASAKKKIHFNQKRKE A |
Secondary structure | LLLLLLLHHHHLLLHHHHHHHHHHLLLLLEEELLLEEELLLEEEELHHHEEEEHHHHLLL L |
PRMN | LLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLL L |
PiMo | oooooooooooooooooooooooTTTTTTTTTTTTTTTTTTTTiiiiiiiiiiiiiiiii i |