ENST00000608972.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

ENST00000608972.1

Source

Gencode19

Same with

,

Classification

intronic(AS)

Length

1327 nt

Genomic location

chr7+:29048542..29049868

Exon number

1

Exons

29048542..29049868

Genome context

Sequence
000001 AGCCCAAGGC ATAAGCTGAA ATCTGTTGAT TTTATTTACT TGCTGCTTCT TACTGAGCCA CTGTTGGCAG AGTTGAATTG 000080
000081 AAAAGGTGCT AAGGGAATAA CTTTCTGATT TTTTTTTTGA GCTGGATATT TTGCTAGCCA ACCTCAGCAC AGGACACCCA 000160
000161 GAAGAAAAAT GAACCTACAT AACCACCCGG ACTTGGATGT GAAATGTCCA CTCTGCCTTC GCTGTGTGTG TGTATGCCAG 000240
000241 AGTCCTTCAA TTTGATGGCA TTAAAAAAAA AAAAAAAAAA AAAGACAGGA GACAGCTATG GAAAGAGAAT ACAAACCATG 000320
000321 ACTTTTAGAC GTGAGAAAGG ACAGTAAGCC TTCCTTTAAT TTAATAAGCT CAGGTGAAAG AACTAGAGGC AAGTCCAAGT 000400
000401 GTTTGCTGAG ATCATGGAAT AATCAGAACT CTTATACTTT ACCGGCAAGA ATAATCAATT TGGAAAACAG TTTAACATTA 000480
000481 TCTAGTGAGG CTGACACAGA CACAAGGAGA TATGTGCAAA AATGTCCATA GCAGCACTAT CTGTAGAAGC AAAATACTGA 000560
000561 AAACAACCCA AATGTCCATC GGCAGTGGAA TGGGTGAATA ACACGTATAT GATGAAATAC TATGCAGCAA TGAAAAAGAA 000640
000641 TAAGACACAA TTGAGCATAT CAACATGGGT GAATCTCACA TACAGCGTTG AATAGCAAAA GTATGTTTTT GCAAAATACA 000720
000721 TACAGAATAA TTTCTTTTCT ATAAAATTAA ACATGAAAAG TAAAATATTA TATATGGATA CGTATGTCTG CAGTAAAACT 000800
000801 ATTAACAAAG AAAAAAGAAA GGGGATGGTA AAAGCAAAAT TCAGGACAGT AGTCTACCTC CAGGGGTAAT TAGGAAGGGC 000880
000881 AATGTCGTAT TTTTTAAACC AGCTGGTGAG TACAAAAGTG TTCATTTATC ACTGTTTTAT CTTAGACAGC ATGGTAAATA 000960
000961 TTCTTTGGTA TGTATTCAAT TTTAAATTTA AAAGAAGAAA AGAAAAACCA CCTGCTGATG CTGCCATCCT TGCAAAAATG 001040
001041 AATCTTTAGG AAATTTAACA TGTTCTCTGC TGTGCTTTTT TCTTCTCCCC TACACAGAGA TGATGAGATT GGCCCCATGT 001120
001121 CTGAAAAACA GTATGTGGGG AAGGCCTGGA GAAGCAATTG AACTGAAACA AAGTCAAAAG TGGGAAGTCC CCCTCTGGCA 001200
001201 AGCAGCTCTA AGATGACAGA GCCGGTGCCA GAATCTAAAC CTTGGGACTC TGGTTGCTGT ATAAAAAAAT AAATATTAGG 001280
001281 AACAAAAATA AATACCCACA TCTCCATGCT GGACAGCAGA AGAGCAA
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Predicted Small Protein

Name ENST00000608972.1_smProtein_881:1048
Length 56
Molecular weight 6604.8692
Aromaticity 0.181818181818
Instability index 61.5981818182
Isoelectric point 9.73077392578
Runs 8
Runs residual 0.00606060606061
Runs probability 0.0264087617029
Amino acid sequence MSYFLNQLVSTKVFIYHCFILDSMVNILWYVFNFKFKRRKEKPPADAAILAKMNL
Secondary structure LLHHHHHHHHLLEEEEHHHHHHHHHHHHHHHHHHHLLLLLLLLHHHHHHHHHHLL
PRMN LLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLLLLLLL
PiMo ooooooooooooTTTTTTTTTTTTTTTTTTiiiiiiiiiiiiiiiiiiiiiiiii