ENST00000608972.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000608972.1 |
Source |
Gencode19 |
Same with |
, |
Classification |
intronic(AS) |
Length |
1327 nt |
Genomic location |
chr7+:29048542..29049868 |
Exon number |
1 |
Exons |
29048542..29049868 |
Genome context |
|
Sequence |
000001 AGCCCAAGGC ATAAGCTGAA ATCTGTTGAT TTTATTTACT TGCTGCTTCT TACTGAGCCA CTGTTGGCAG AGTTGAATTG 000080
000081 AAAAGGTGCT AAGGGAATAA CTTTCTGATT TTTTTTTTGA GCTGGATATT TTGCTAGCCA ACCTCAGCAC AGGACACCCA 000160 000161 GAAGAAAAAT GAACCTACAT AACCACCCGG ACTTGGATGT GAAATGTCCA CTCTGCCTTC GCTGTGTGTG TGTATGCCAG 000240 000241 AGTCCTTCAA TTTGATGGCA TTAAAAAAAA AAAAAAAAAA AAAGACAGGA GACAGCTATG GAAAGAGAAT ACAAACCATG 000320 000321 ACTTTTAGAC GTGAGAAAGG ACAGTAAGCC TTCCTTTAAT TTAATAAGCT CAGGTGAAAG AACTAGAGGC AAGTCCAAGT 000400 000401 GTTTGCTGAG ATCATGGAAT AATCAGAACT CTTATACTTT ACCGGCAAGA ATAATCAATT TGGAAAACAG TTTAACATTA 000480 000481 TCTAGTGAGG CTGACACAGA CACAAGGAGA TATGTGCAAA AATGTCCATA GCAGCACTAT CTGTAGAAGC AAAATACTGA 000560 000561 AAACAACCCA AATGTCCATC GGCAGTGGAA TGGGTGAATA ACACGTATAT GATGAAATAC TATGCAGCAA TGAAAAAGAA 000640 000641 TAAGACACAA TTGAGCATAT CAACATGGGT GAATCTCACA TACAGCGTTG AATAGCAAAA GTATGTTTTT GCAAAATACA 000720 000721 TACAGAATAA TTTCTTTTCT ATAAAATTAA ACATGAAAAG TAAAATATTA TATATGGATA CGTATGTCTG CAGTAAAACT 000800 000801 ATTAACAAAG AAAAAAGAAA GGGGATGGTA AAAGCAAAAT TCAGGACAGT AGTCTACCTC CAGGGGTAAT TAGGAAGGGC 000880 000881 AATGTCGTAT TTTTTAAACC AGCTGGTGAG TACAAAAGTG TTCATTTATC ACTGTTTTAT CTTAGACAGC ATGGTAAATA 000960 000961 TTCTTTGGTA TGTATTCAAT TTTAAATTTA AAAGAAGAAA AGAAAAACCA CCTGCTGATG CTGCCATCCT TGCAAAAATG 001040 001041 AATCTTTAGG AAATTTAACA TGTTCTCTGC TGTGCTTTTT TCTTCTCCCC TACACAGAGA TGATGAGATT GGCCCCATGT 001120 001121 CTGAAAAACA GTATGTGGGG AAGGCCTGGA GAAGCAATTG AACTGAAACA AAGTCAAAAG TGGGAAGTCC CCCTCTGGCA 001200 001201 AGCAGCTCTA AGATGACAGA GCCGGTGCCA GAATCTAAAC CTTGGGACTC TGGTTGCTGT ATAAAAAAAT AAATATTAGG 001280 001281 AACAAAAATA AATACCCACA TCTCCATGCT GGACAGCAGA AGAGCAA |
Predicted Small Protein
Name | ENST00000608972.1_smProtein_881:1048 |
Length | 56 |
Molecular weight | 6604.8692 |
Aromaticity | 0.181818181818 |
Instability index | 61.5981818182 |
Isoelectric point | 9.73077392578 |
Runs | 8 |
Runs residual | 0.00606060606061 |
Runs probability | 0.0264087617029 |
Amino acid sequence | MSYFLNQLVSTKVFIYHCFILDSMVNILWYVFNFKFKRRKEKPPADAAILAKMNL |
Secondary structure | LLHHHHHHHHLLEEEEHHHHHHHHHHHHHHHHHHHLLLLLLLLHHHHHHHHHHLL |
PRMN | LLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLLLLLLL |
PiMo | ooooooooooooTTTTTTTTTTTTTTTTTTiiiiiiiiiiiiiiiiiiiiiiiii |