ENST00000609310.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000609310.1 |
Source |
Gencode19 |
Same with |
, |
Classification |
antisense |
Length |
1207 nt |
Genomic location |
chr3-:15480706..15491501 |
Exon number |
5 |
Exons |
15480706..15480884,15482996..15483176,15485750..15486386,15489191..15489352,15491454..15491501 |
Genome context |
|
Sequence |
000001 AGGCACAAGG GAGGAAACAG ATCCAGAGAT GTCATGGACT TGCCCAAGGG TGGATCCTTA GGGTGTTGAC TGCTGCAGTT 000080
000081 TCAAGCTTAC ATCTGCACCC TGCAGAATCC AGAGGAAGAG ACAATGCCTG TTCCAGTGGC TCTCAAGAAA TTCTTTTCCA 000160 000161 GCCAGGCATG GTGGCTCATG CCTGTAATCC CAGCACTTTG GTAGGCTAAG TACTGGACTG GTTCTGATGC TTTCACCAGT 000240 000241 AACAGAAGCT CAAGCTGTGC TCAACTGACC CCCAAGGATC CAGCCTGTCT CTGGGATTCT CTAGGCCGTC CCGGAACTCC 000320 000321 TACCATGACC AGGGAAGTGT AGGGTTGGGG TTTGGCCCTA GACCTCTTAT CTGTCCACCT GCAAAGCCGT TTTAGTAACA 000400 000401 GATTTGGAAG CAAAGTAAGG TTTTTGATGG CAGCTTGGTC ACCAGCACTT CACTTAGGAA CCAGTGCTGG GGAAGCGGAT 000480 000481 GGGACAATTT CTGAGTGTCT CCTGGGACAG ACACATAGGC CATCGCTCCG CTAGGGGCAT GGAGGGTATG TGTGGGTCAA 000560 000561 ATTGCTAAAT AATCTCCAAA GCTCATTACA ATTAATGGGC CGACCTATTC CCCAATGCCT GCTTTACTGG AATTGTTCGG 000640 000641 CCCCATCCTT CCCCCACAGT AGAGTGAGCC AATTTAAATT TTCAATGCAG TTCTTCAGCA CTTGTGTGAT GATAATCAGC 000720 000721 TTACAGGTCA AGGACCTTGG CAATTCACCA AGGAGATTGT TACATTTGAG CAATTCACCA TTACAATCCA TGGGCCCAGA 000800 000801 GGTTCCAGGA GCCTGCTTCC AGCCACCTCC ACCAGGATGC CAGGCATAAA CAGGGTCTCG CCATGTTGCC CAGGCTGGTC 000880 000881 TCAAACTCCT GGACTCAAGC AATCCTCCCA CCTCAGCCTC CCAAAGTGCT GGGATTACAG GCATGAGTCA CCACAGCCAG 000960 000961 CCCAGTACCT GCTTTTAAGG AGCTCATACC GACCAGAGTT CAAGCAAAAA AAAAAAAAAA AAAAAAAGGT CTACTTAAAC 001040 001041 TTTGAAAGAT GAGATTGTTC AAAAATGACA CGAGAAAATC ACCCATCACC ACTAAGTTAA AGACTTGAAT ATGTGAGAGT 001120 001121 TCCAGAGCCT CAAACTCCTA CTACAGTCAC TGATCCATAA CATTTTCCTC TTGCAATGGA CTCCACGCCA AAGTAGCTCA 001200 001201 GTCTTGC |
Predicted Small Protein
Name | ENST00000609310.1_smProtein_836:1051 |
Length | 72 |
Molecular weight | 8406.7094 |
Aromaticity | 0.112676056338 |
Instability index | 71.7647887324 |
Isoelectric point | 10.0256958008 |
Runs | 7 |
Runs residual | 0.0499629355078 |
Runs probability | 0.0259166729755 |
Amino acid sequence | MPGINRVSPCCPGWSQTPGLKQSSHLSLPKCWDYRHESPQPAQYLLLRSSYRPEFKQKKK KKKKVYLNFER |
Secondary structure | LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHLLLLHHHHHHHH LLLLEEELLLL |
PRMN | - |
PiMo | - |