ENST00000609310.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

ENST00000609310.1

Source

Gencode19

Same with

,

Classification

antisense

Length

1207 nt

Genomic location

chr3-:15480706..15491501

Exon number

5

Exons

15480706..15480884,15482996..15483176,15485750..15486386,15489191..15489352,15491454..15491501

Genome context

Sequence
000001 AGGCACAAGG GAGGAAACAG ATCCAGAGAT GTCATGGACT TGCCCAAGGG TGGATCCTTA GGGTGTTGAC TGCTGCAGTT 000080
000081 TCAAGCTTAC ATCTGCACCC TGCAGAATCC AGAGGAAGAG ACAATGCCTG TTCCAGTGGC TCTCAAGAAA TTCTTTTCCA 000160
000161 GCCAGGCATG GTGGCTCATG CCTGTAATCC CAGCACTTTG GTAGGCTAAG TACTGGACTG GTTCTGATGC TTTCACCAGT 000240
000241 AACAGAAGCT CAAGCTGTGC TCAACTGACC CCCAAGGATC CAGCCTGTCT CTGGGATTCT CTAGGCCGTC CCGGAACTCC 000320
000321 TACCATGACC AGGGAAGTGT AGGGTTGGGG TTTGGCCCTA GACCTCTTAT CTGTCCACCT GCAAAGCCGT TTTAGTAACA 000400
000401 GATTTGGAAG CAAAGTAAGG TTTTTGATGG CAGCTTGGTC ACCAGCACTT CACTTAGGAA CCAGTGCTGG GGAAGCGGAT 000480
000481 GGGACAATTT CTGAGTGTCT CCTGGGACAG ACACATAGGC CATCGCTCCG CTAGGGGCAT GGAGGGTATG TGTGGGTCAA 000560
000561 ATTGCTAAAT AATCTCCAAA GCTCATTACA ATTAATGGGC CGACCTATTC CCCAATGCCT GCTTTACTGG AATTGTTCGG 000640
000641 CCCCATCCTT CCCCCACAGT AGAGTGAGCC AATTTAAATT TTCAATGCAG TTCTTCAGCA CTTGTGTGAT GATAATCAGC 000720
000721 TTACAGGTCA AGGACCTTGG CAATTCACCA AGGAGATTGT TACATTTGAG CAATTCACCA TTACAATCCA TGGGCCCAGA 000800
000801 GGTTCCAGGA GCCTGCTTCC AGCCACCTCC ACCAGGATGC CAGGCATAAA CAGGGTCTCG CCATGTTGCC CAGGCTGGTC 000880
000881 TCAAACTCCT GGACTCAAGC AATCCTCCCA CCTCAGCCTC CCAAAGTGCT GGGATTACAG GCATGAGTCA CCACAGCCAG 000960
000961 CCCAGTACCT GCTTTTAAGG AGCTCATACC GACCAGAGTT CAAGCAAAAA AAAAAAAAAA AAAAAAAGGT CTACTTAAAC 001040
001041 TTTGAAAGAT GAGATTGTTC AAAAATGACA CGAGAAAATC ACCCATCACC ACTAAGTTAA AGACTTGAAT ATGTGAGAGT 001120
001121 TCCAGAGCCT CAAACTCCTA CTACAGTCAC TGATCCATAA CATTTTCCTC TTGCAATGGA CTCCACGCCA AAGTAGCTCA 001200
001201 GTCTTGC
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Predicted Small Protein

Name ENST00000609310.1_smProtein_836:1051
Length 72
Molecular weight 8406.7094
Aromaticity 0.112676056338
Instability index 71.7647887324
Isoelectric point 10.0256958008
Runs 7
Runs residual 0.0499629355078
Runs probability 0.0259166729755
Amino acid sequence MPGINRVSPCCPGWSQTPGLKQSSHLSLPKCWDYRHESPQPAQYLLLRSSYRPEFKQKKK
KKKKVYLNFER
Secondary structure LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHLLLLHHHHHHHH
LLLLEEELLLL
PRMN -
PiMo -