ENST00000609579.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000609579.1 |
Source |
Gencode19 |
Same with |
, |
Classification |
intergenic |
Length |
929 nt |
Genomic location |
chr10+:52384723..52389732 |
Exon number |
4 |
Exons |
52384723..52384951,52386410..52386565,52388791..52388938,52389337..52389732 |
Genome context |
|
Sequence |
000001 GCCATCGGGC CGCGGGCGCT CGGAACCGAC CTGGGAGCTG GCGGGACCGT CCTCCCCCGC CACGCCCTCC CATCGGGCTT 000080
000081 TGGGCGCCGG ACTCTGGCCA CCGCTCGGCA CCTGCCTCCG CCTCGCCTTG GGGTATAGGA GTCCTGTACC GACCCCTGGC 000160 000161 TTGCCCAGAG GACAGGTTCT CGCCCGGGCC AGAAGCAAAC TGCGGCGAAA TCGAGACAAC AGAACTCAGT GCCCTTTCTT 000240 000241 TTTCTTCAGA GTCACTCTGT CACCCAGGCT GGAGTGCAGT GGCACCATCA CAGCTCCCTG CAGCCTTGAC TTACAGGGCT 000320 000321 CCAGTGATCC TCCACCCTCA GCCTCCTGAG TATCTGAGAC CACAGGTGCA AGCCACCATG CCCAGTTGTA GCAAGGAAAC 000400 000401 CAAAAGGTAT AAACATTCAC TGATTGAAAA ACAATGTCAT AAAGTCATCC CAGTATCTGT GAGGAGTTGG TTCCAGGACC 000480 000481 CCTGAGGACA CCAAAATCCT CAGATGCTCA AGTCCCTGAT AAAAAAATAA AAGCAGTGGT GCCCTCGGGT TCAAAAACCT 000560 000561 GAACGGTGGT CTTCAGTTGT TCCCCCAAGC TCCTCTATCA GAGGCCCAGA CACTCCAAGA GGCTGGGAAG AGGCAAGTGG 000640 000641 CTTTCCCTGA CTGGCATCAG ACTCCTGGAT GGCTGTGTTT CTGCATACTC CACCATCAAC AATCAGAAGG GCACTGCTTT 000720 000721 CTTCAAGAAG GGGACCTTGC AAAGAACTGT CTCAGATGGA CTATCTTTGA GTTCATCTTG TTCTGAATGT GAGTCTGAGT 000800 000801 CTTTGTTTCC AGATGACACA GTGCTGTCTG AGTCCTCTGA ATCACCTGCC TCAGAGCTGC AGCAAAGTTT CTGCTGCCCA 000880 000881 GAAACTGAAT GGGCTGCTTG TAATGCAGAT TCTTCCTCCT GGACAAGAA |
Predicted Small Protein
Name | ENST00000609579.1_smProtein_377:484 |
Length | 36 |
Molecular weight | 4173.8411 |
Aromaticity | 0.0857142857143 |
Instability index | 97.7914285714 |
Isoelectric point | 9.51068115234 |
Runs | 5 |
Runs residual | 0.0382566585956 |
Runs probability | 0.031160572337 |
Amino acid sequence | MPSCSKETKRYKHSLIEKQCHKVIPVSVRSWFQDP |
Secondary structure | LLLLLLLLLLLLHHHHHHLLLEEEEEEEEEEEELL |
PRMN | - |
PiMo | - |