ENST00000609830.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000609830.1 |
Source |
Gencode19 |
Same with |
, |
Classification |
intergenic |
Length |
669 nt |
Genomic location |
chr1+:714317..719809 |
Exon number |
4 |
Exons |
714317..714472,717317..717516,718491..718743,719750..719809 |
Genome context |
|
Sequence |
000001 CGCAGCAAGG GCCAGACTCT GCGCTAGCAG GCGCTGCGCG CCAACCGGCC GGCACCTGTC GCAGAAGGTG CAACCGATCG 000080
000081 CACTGTCGCG CAGAAGCTCC TCAATGGCCA GCGCCAGCTG CAGCCCCGGC CGCCCACTCG CCTCATCTGA GCCTGGGCAA 000160 000161 ATCTGGATTG GGAAAGTTGA CATTAATCAA CTCATTATTC CTCACAGATT TGTATTCTCC AGAGTATCCA GGTCCTTCTC 000240 000241 AGAGAATTAA AAAGCCTGTA CAGGTCTAGA TATTGGTATT TTTAATTGAT GATAAGCTGG AATAATATTA ATACACACAA 000320 000321 AGCACGTGTT GTAACTTTCA TTATGCTTCC TTAGAGCGCT GCTCTAAGCT GTTGATGAAA AATATTGTTG GTGAGCTCTG 000400 000401 CTTAGGTAAT ATATAGGACA TGAGCAGAGA GGAGGCACGT GAACAGTTCT GGCCTGGAGT AGGCTTCATT GAGGCTGTGA 000480 000481 TGCTTTTAGC TGGATTTGAA GAAGTGGTAG TGATCATCCC AGTGCACAGG ATAGGTGGAC AGTCTATGTA TTCTGAGCAG 000560 000561 TAACTCATAT ATCTCATACT GCAAGACCCC AAAGGAGTAA TTTTGTGAAC TCTGTTCACG GAAAGGGCCT GGGAGCTGCA 000640 000641 ACACCTCAAC AGCAACAAGC ACACCTGCT |
Predicted Small Protein
Name | ENST00000609830.1_smProtein_419:562 |
Length | 48 |
Molecular weight | 5324.0739 |
Aromaticity | 0.106382978723 |
Instability index | 75.8361702128 |
Isoelectric point | 4.58551025391 |
Runs | 9 |
Runs residual | 0.0252127659574 |
Runs probability | 0.050079491256 |
Amino acid sequence | MSREEAREQFWPGVGFIEAVMLLAGFEEVVVIIPVHRIGGQSMYSEQ |
Secondary structure | LLHHHHHHHLLLLLLHHHHHHHHLLLLEEEEEEEEEEELLLEEEELL |
PRMN | LLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLL |
PiMo | iiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTToooooooooooo |