HIPK1-AS1

Annotated Information

Name

Approved symbol: HIPK1-AS1

Approved name: HIPK1 antisense RNA 1

HGNC ID: HGNC:50576

RefSeq ID: NR_110725

LncBook ID: HSALNT0012995

Characteristics

LncRNA HIPK1-AS1, which is antisense of protein-coding gene Hipk1, turns out to be brain-specific((Soibam B 2017)).

Function

Targets super-enhancers in fetal brain((Soibam B 2017)).

Labs working on this lncRNA

Computer Science and Engineering Technology, University of Houston-Downtown, Houston, Texas 77002, USA((Soibam B 2017)).

Sequence

>NR_110725.1 Homo sapiens HIPK1 antisense RNA 1 (HIPK1-AS1), transcript variant 1, long non-coding RNA

000001 ACGACAGTGC CTAGCAGAGG AGCTTCACTG CCGGTGAGGG ATTACCTCAG GTTAGGCTTT AATGTTTCGT TGCCGTCTAG 000080
000081 AGACGTTCTA GCAATGTGAC ATCTGTGTAC CATATCTGGA AGTCTCCCTG TACGTCAAGA GCCCCTTAGG GGAGTCTCCC 000160
000161 ATTGCCGCCG TGGGAACCTG TGTTTACATT ACGAGGAGAG AGAATAGCTG TACTCTGAAC TCAAACGCTC AAAACATGCA 000240
000241 GTGAGCGAAT GCTAGCATAA TTTTCTTGCC TCTACCAGAA GGAAGGCTGG GTATTTAGGA AACAGAACGC GTTGGGCACA 000320
000321 ACATTCTGAG AAAATGGACA CAGAAAATTA GGTTATCCTA ATAGAAAAGC AGTTGCATCT CCCAAAGTCA AGAGATTCTG 000400
000401 TAGGACTTCC GATGTATCTC CTGCTGTGTA AAATATTCAG GTTCCTGAAG TGGGGGACAT TTTTAGGGCA ACTGTAATTT 000480
000481 CTTCATTTTT TCCATCCCAC AAGTGCTGGA GGCAGCAGTG ATCTGAGCTC TAGAAAGTGA CTGTCCGTCA CCATCGAAAC 000560
000561 TTCCTTCTAC TACTTAAAGT CCTCACATTG GGCTGACCTG GGAAACATGA AGATAAAAAG AGTGGGTAAA CATGCCTGCT 000640
000641 TGATGAGCCA GAAAAAAAGG CAGAAACCTG TGGTCTGGGT AGAACAGATC CTGCTCAGAA TGGACCTTAC AGTCTAATGA 000720
000721 GGAAAAAACG TGTGCAGACA TATATAAGAT AAGTGAGAGA GTCGGAGAAG AACATCAGAA GTGATATTTG AGCATAGTAA 000800
000801 GGTCAAAGAA GTTTCAAAGT TTAGTCATTT GTCCATTCAG TAACTATTTA TAGAGCATCT TCTGTGTGCT AGGCACTATA 000880
000881 TAAGAAATTA AGGGGCTGGG TGTGGTGGCT CATGCCTGTA ATCCCAGCAC TTCGGGAGGC TGAGGCAGGT GAATCACCTG 000960
000961 AGGTCAGGAG TTCGAGACCA GCCTGGCCAA CATGGTGAAA CCCCGTCTCT ACTAAAAATA CAAACATTAG CCAAGTGTAG 001040
001041 TGGCGCATGC CTGTAATCCC AGCTACCCTG GAGGCTTAAG CAGAAGAACC GCTGGAACCC AGGAGAAGAA GGCTACCATG 001120
001121 AGCCGAGATT GCACCATTGC ACTCCAGCCT GGGCGACAGT GAGACTCTGT CTCAAAAAAA AAAAAAAGAA AGAAAGAAAG 001200
001201 AAATAAAAAA AAAAGAAATT AAGGATACAC AGAAGAAAAG GCATGGTCTG TGCCCTGAAG GAGCTTACAG TTAAGCAGAG 001280
001281 AAGTTGCACG ATTTGGAAGT AGTAAGGTAA ATTGAGTCAG ATTTTGAAAG GCAATGTAGA GCTGTTAGAA GTTTATTCGC 001360
001361 ACAGGTAGCC AGGCACAGTG GCTCATGCCT GTAATCCCAG CACTTTGGGA AGCCAAGGTG GCAGATCACT GGAGGTCAGG 001440
001441 AGTTCAAGAC CAGCCTGGCC AACACAGTGA AACCCCATCT CTACTACAAA TACAAAAATT AGCCAGATAT GGTGGCATAT 001520
001521 GCTTGTAATC CCAGCTACTC GGGAGGCTGA GGCAGGAGAA TCGCTTGAAT CCGGGAGGCA GAGGTTGCAG TGAGCCGAGA 001600
001601 TCGTGCCACT GCAGTCTAGG CTGGGCAAAC AGAGCCAGAC TCTGTCTCAA AAAAGAAGTT TATTCAGACA GGAAAGAAGG 001680
001681 CGAGAAGGGG CAGATATGTG AAATACATCC TCCTAAACCA AGTCAGAGCA ACTGGAGAGG GAGGTGGAGC AGTTAGCAAT 001760
001761 CGGAAGCATT CAAGTTTCAT TCAGGGTATA AACCAGGAAA AGTTGTTCTG GCCCCTCATC TGGTTTCATG AAGGACAATA 001840
001841 TCTAGCATGA GAGTGACAGG GGTTAGAATA ATGGACATTT TGGGGACTGG GTCCTAGCAG AAATGATGGA ATAATGGAAC 001920
001921 AGGAGTTTGG ATGAATGGGC ATATTATGGG ATTAAAGAAG ATTTGAATAC AAGCTTTCCT AATAAATGAA AGGGGAGGTG 002000
002001 AAACTAGAGC ATGCTGATGG CTGCACAGCA TTGTGAATGC ACTAAATGCA CTAACTGTCC ACTTTAAAAT GTTTAGTAAT 002080
002081 ATGTCGATTT TACCTAAATA AAAAAAAGGA AGCAACAAAA AAAAA

>NR_110726.1 Homo sapiens HIPK1 antisense RNA 1 (HIPK1-AS1), transcript variant 2, long non-coding RNA

000001 GAAGTGCAGC TGAATGGACT CTCTAGGACG ATCGCATAGT ACTGATTGCA GTAGGAGTCG GTGGGCCTCG AGTAGGTGGG 000080
000081 CCTCCGTAGG GAGCCAGCGT GGATCGAGTG CGGGGCCTGG ACTTCCCGCC CCCTCCGCAC TGCAGACTCT GCGGTGATTT 000160
000161 AAAGAAACTT CCTTCTACTA CTTAAAGTCC TCACATTGGG CTGACCTGGG AAACATGAAG ATAAAAAGAG TGGGTAAACA 000240
000241 TGCCTGCTTG ATGAGCCAGA AAAAAAGGCA GAAACCTGTG GTCTGGGTAG AACAGATCCT GCTCAGAATG TATAAACCAG 000320
000321 GAAAAGTTGT TCTGGCCCCT CATCTGGTTT CATGAAGGAC AATATCTAGC ATGAGAGTGA CAGGGGTTAG AATAATGGAC 000400
000401 ATTTTGGGGA CTGGGTCCTA GCAGAAATGA TGGAATAATG GAACAGGAGT TTGGATGAAT GGGCATATTA TGGGATTAAA 000480
000481 GAAGATTTGA ATACAAGCTT TCCTAATAAA TGAAAGGGGA GGTGAAACTA GAGCATGCTG ATGGCTGCAC AGCATTGTGA 000560
000561 ATGCACTAAA TGCACTAACT GTCCACTTTA AAATGTTTAG TAATATGTCG ATTTTACCTA AATAAAAAAA AGGAAGCAAC 000640
000641 AAAAAAAAA