LINC00299

From LncRNAWiki
Jump to: navigation, search

Annotated Information

Approved Symbol

LINC00299

Approved Name

long intergenic non-protein coding RNA 299

Previous Symbols

C2orf46, NCRNA00299

Synonyms

FLJ45673

Chromosome

2p25.1

RefSeq ID

NR_034135

OMIM ID

_

Ensembl ID

ENSG00000236790

pubmed IDs

12477932

Sequence

>gi|300796743|ref|NR_034135.1| Homo sapiens long intergenic non-protein coding RNA 299 (LINC00299), long non-coding RNA

000001 GACACTGAGC TAGGGTGGCC ATGCCTCGCC CTGACCTCAG GCCCATGGGC CCCGTGGATG AGCAGGGGCA TGCAGGACAG 000080
000081 GCCTGCAGGG CAGGGCAGGG CAGTAGGGTT TTCATCGGCA AAGCCCCGTG ATCCTCACAG TAGCCCCAGG AGTTGGACCA 000160
000161 GCCTGGACCC TTACCCCATT TTACAGCCAG AAACAAGATA AGCGCCTTGC AGGGGCCCTT AACTGACTGC TGGGTTCGAT 000240
000241 GGTTCAAAGA GAAAAAGCAC GTGATAACTT TGAAGGAGGC TGCCTGGCTG AGCTGATCGG ATCACCTAGA GACTGGAAAT 000320
000321 GCTTTCTGGT CTGAAGTCAC CTGCCCTATC TGGACATTCC ATAGACTACC ACTTTTACCC ACGACTTCGA TGTGGCATGC 000400
000401 TCATTGGACC AGATAAGCAA GCAGTGGCAA GTGGATTGGA GGTCTTGGAA TATGAAGGCC TGGCCCTCGT CTCAGCTTGG 000480
000481 AATAAATCTG AAGGCCCATC ACAGCTTCAG AGATGCTTGG AGAAGGCTGA GGTCTCCCCT GTAACCTTAT GAGAACCTTG 000560
000561 AGTTGTTGAA CTCATTAATT CTTTGGGACC ATCTTCCTGA TGTTCAAGTT TGTGAAACAG GCTTTCCCTT TAAGATTTGT 000640
000641 TTTCCTCAAA ATACAAGACT ATTGATGCTT CAGTTTTGAA GTGGATTCTG CACTCAAGAA ATGTACCATT GAAGAATGGG 000720
000721 ACTGGTAGGA AGGGAAAAAA ACTAAAAGGA AACGCATTTT CGAGTTGCAC ATCATGATCA GGCACAGAGT CCAGATACAC 000800
000801 TTGGAGTAGC AAGCATCCAT CCTTGTGGAG ACGCACATGA ACCAGGACTC TCTGCACCCA CCCCTCTCAA GTTTTATTTT 000880
000881 CCGACGGCTG TAATGTTCCA GGACACCTGC CATCATGGAG GGTTATCCAG CACCTGGAGG ATACCTGCTA CCTATTTTGT 000960
000961 GAACAATTTG GCATGAGGAG AGAAAGGAAC CTGAAGTTTT TAGCAAGGAA GCTTCCTGTC TCCAAGGGGA TTTTTTCCCA 001040
001041 CAGAAATATA TTGCTGATTG GATGTTGCCT CTCTAATTTT GGAGACCATA TGTTCTAGGT ATTCCGGGAA AAATCTGCAT 001120
001121 TTCAAATCCT GGATCCATTG TTCCCAAAAG CCATGTAAGA ATCCCAACAG AGATAGGTCC CTCTCATGGA TATGTCCTAT 001200
001201 GTCCCAGGGA TACCGCTCAA AGCATTTTGT GGCTGAAGAC ATTTAATCTT TCATAGAAAC TCCTGAAGAA GATGTTATTG 001280
001281 CTATTATAAT CATATGTATT TGGAAATGAA GACTTTGAAA GGTTCTAACT TATTCAACAT TTCTCAACCA GCATGTGGCA 001360
001361 AAGTTCTGAA AGTCTGTTAT TCTAACCAAC ATCCTACCTT GAGGAGCAAT GATGTTCACC TGTCTGGTTG CCACAACTCA 001440
001441 CGTCCTTCTG TGGGCAGCAG AGTTCCAAGA CGTTCCCCAA GATCTCATTT TCTGGAGGTG CATGTCTCCC GTGACCCCCT 001520
001521 CTTTGGATTG CCCGCAGAGC CCGTGAAGAT GGTGTTATCA CTCCTGTGAT TACTTTACTG ATCAGGTGAC TTTGAGTCAA 001600
001601 TCAAAAGGTA GATTATCCAG GTGTGCCTGA TTTGATCAGG TGGTCCCTTA AGGAGGCTTA AAATGACCCT TTCTGAAGTA 001680
001681 GAGTAATTGG AAAAGTAAGA GGGTCTATGG GTGGGGTCAC CTGGCAAGGA ACTGAACTCA GCCTCCATGA GCTCTGGCCA 001760
001761 CCAGCTGACC TTTAGCAAGA AAGCAAATCT TTCTTTGGTC AGTCTCCACA ACAGGACGAA GCTGGCTGAG CCCTTGCCTT 001840
001841 TGGCCCTGTG AGATGCTGAC CCGAGTATCC AGCGAACACG TGCCAGAGTC CTGACCCATG GAAACTGAGA TGATGAGTCT 001920
001921 GTGTTGCTTT AAGCCACTGT GTCTACAGTA ATTGGTTAGA CAGCAATAGA AAACTAATAA ACCTCCCTCT TTTTCATTTA 002000

Predicted Small Protein

Name LINC00299_smProtein_20:130
Length 36
Molecular weight 3788.3047
Aromaticity 0.0277777777778
Instability index 58.7666666667
Isoelectric point 9.48956298828
Runs 5
Runs residual 0.0415695415695
Runs probability 0.0475357710653
Amino acid sequence MPRPDLRPMGPVDEQGHAGQACRAGQGSRVFIGKAP
Secondary structure LLLLLLLLLLLLLLLLLHHHHHHLLLLLEEEEEELL
PRMN -
PiMo -