LINC02617
LINC02617 is intergenic lincRNA, may serve as a therapeutic target in colorectal cancer.
Contents
Annotated Information
Name
LINC02617: long intergenic non-protein coding RNA 2617 (HGNC nomenclature), ENST00000539009 [1].
Characteristics
LINC02617 is an intergenic 650 bp long non-coding RNA, located on human chromosome 12p13.2 [1].
Function
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Expression
LINC02617 is downregulated in colorectal cancer (CRC) [1].
| Experiment | Forward primer | Reverse primer |
|---|---|---|
| qRT-PCR | 5'-AAGCCCCCTAGACCATCA- 3' | 5'-GATCCAACAGGACTGCAAAG- 3'[1] |
Regulation
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Diseases
- Colorectal Cancer (CRC) [1]
Labs working on this lncRNA
- Department of Radiation Oncology, Yunnan Cancer Hospital, The Third Affiliated Hospital of Kunming Medical University, Kunming, China.[1]
References
Sequence
>gi|113523642|ref|NR_159946.1| Homo sapiens long intergenic non-protein coding RNA 2617 (LINC02617), long non-coding RNA
000001 GACTCTTTTC GGACTCAGCC CGCCTGCACC CAGGTGAAAT AAACAGCCAT GTTGCTCACA CAAAGCCTGT TTGGTGGTCT 000080
000081 CTTCATACAG ACGCGCATGA AATTTGGTGC CGTGACTCGG ATCGGGGGAC CTCCCTTGGG AGATCAATCC CCTGTACTCC 000160
000161 TGTTCTTTGC TCCGTGAGAA AGATCCACCT ATGACCTCAG GTCCTCAGAC CGACCAGCCC AAGGAACATC TCACCAATTT 000240
000241 TAAATCAGGA CACCACTGAA AATCGGACTG TTCAACTCAC CTGGCAGCCA CTCCCAGAGC CCCTGGAACT CTGGCCCAAG 000320
000321 GCTCTCTGAC TGACTCCTTC CCAGATTTTC TCAGCTTAGC AGCTGAAGAC TGACGCTGCC GGATCGCCTC GGAAGCCCCC 000400
000401 TAGACCATCA CGGACGCCGA GCTTCCGGTA ACTCTCACAG TGGAAGACTC AGCCCGCCTG CACCCAGGTG AAATAAACGG 000480
000481 CCATGTTGCT CACACAAAGC CTGTTTGGTG GTCTCTTCAC ACGGACGCGT GTGAAATTTG GTGCCAAAAC CCGGGTACAT 000560
000561 CTTCCTGAAT CAGGCTTCTG AGAACTGTTC CACTTTGCAG TCCTGTTGGA TCTATATCTT GAGAAATAAA TTAAAGAGCT 000640
000641 TTTCCCTCCA
000081 CTTCATACAG ACGCGCATGA AATTTGGTGC CGTGACTCGG ATCGGGGGAC CTCCCTTGGG AGATCAATCC CCTGTACTCC 000160
000161 TGTTCTTTGC TCCGTGAGAA AGATCCACCT ATGACCTCAG GTCCTCAGAC CGACCAGCCC AAGGAACATC TCACCAATTT 000240
000241 TAAATCAGGA CACCACTGAA AATCGGACTG TTCAACTCAC CTGGCAGCCA CTCCCAGAGC CCCTGGAACT CTGGCCCAAG 000320
000321 GCTCTCTGAC TGACTCCTTC CCAGATTTTC TCAGCTTAGC AGCTGAAGAC TGACGCTGCC GGATCGCCTC GGAAGCCCCC 000400
000401 TAGACCATCA CGGACGCCGA GCTTCCGGTA ACTCTCACAG TGGAAGACTC AGCCCGCCTG CACCCAGGTG AAATAAACGG 000480
000481 CCATGTTGCT CACACAAAGC CTGTTTGGTG GTCTCTTCAC ACGGACGCGT GTGAAATTTG GTGCCAAAAC CCGGGTACAT 000560
000561 CTTCCTGAAT CAGGCTTCTG AGAACTGTTC CACTTTGCAG TCCTGTTGGA TCTATATCTT GAGAAATAAA TTAAAGAGCT 000640
000641 TTTCCCTCCA
