Lnc-AGXT2L1-1:3

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

lnc-AGXT2L1-1:3

Source

LNCipedia2.1

Same with

,

Classification

intergenic

Length

3711 nt

Genomic location

chr4-:109459346..109541553

Exon number

5

Exons

109459346..109461970,109463175..109463372,109477421..109477917,109477920..109478220,109541464..109541553

Genome context

Sequence
000001 TCACACTAGC TGTCTGTGTC AAGGCCACGC AGAAATCTAT TGGAAATCGC TGTGGAAACA AACGCAAATG AAAAGCCGCA 000080
000081 AAGAGCAAAG GCTGCTCACT GGCCCGTCTC CTCTCATGAC TGCTGCTCTG GGAACCACCT CTCTGCTCTC CATCGCTACC 000160
000161 ACTCTAGCCT GTGGCCTGCT CCTGGTTGAA GAAGCCATCA ATGAAAATGA ATACCACTCT GGAAATCTTG GGTGGTCTGA 000240
000241 CCTGATATTT TCGCATAGTG GCCACAGATA TTTTAGGCCC CCAAGAGGTA GTCTTACTCT TTCAATTTTA CTGGCTCCAC 000320
000321 TGTTTGAGGA ACTTGGAACA ATTTCCCCAG GGACTGGTCT GGAGGTACTG TTGAATAACA CCACGGTGTT TTTTCCTCTC 000400
000401 CACCAAGGGC CCGTTGATGT CTCAAGACCA GACATAAAAC TTTTGGTGCT CAAGTCACTC AGAATGAGAG TCCTGCTTTC 000480
000481 CCTCAGCACT CTTGCCCTTT GAGGGTGGGG CCAAATGTTT TCTTCCTTTC TTACTGAGGA CTTTTGATCC TGGTTTTTGA 000560
000561 TATTTGTCAT TCCCAGGGGG AATTTTGTAC CCTGTGTCTT GGTAAAGTGT AAGACCACTG TGGATTTTGG GGTTAAGTCT 000640
000641 CATTTCCCTA TCCCTCCCTT CAAGAGAAGA AAGAAAGAGA GAATACCCAA ACCCTGCATC GTCTCTCACT CGCCTGTCCA 000720
000721 GAGCCTATGG AACAGCCATT GGGGCAGCTG TCACAAGCTG TTCACACAGC TTTTCTGATA TACTGACAGT CTCATGAGGA 000800
000801 AGTGCATATA ACTCCCTGCA ATGGTTTGAA TGTGTCCTCC GAAGTTTATG TGCTGGAAAC TTAATACTCA ATACAACAGT 000880
000881 GTTGACAGAA ATAAAAATCT GTCCATGGGC CCTAAACATA TTGTGAGTCT CTAGTCGCTG TGCCCTTTGT GCCTGCTGGG 000960
000961 GATATTGGCC CTGGCAACAG GATGAACATG GACCACTGGA GCCTGGAATT CTGCCACTGA GAGATTCCCC GGGAGCATGG 001040
001041 CTTTCTTTTC TTTCCTGGGT TCCGTGGATT CTCTCCTTCT CCTGAGGAAT TAGCCTCCTT ACTGTCAGAC CAGCCACAGA 001120
001121 ACTTCCTCCC ACTTATCCCT TAGATGTCAA CTACCCACAC TTCAAATCAC CCTGGAGACT GATGTGACTG GGATGATTTG 001200
001201 ACTGCATGTA GGTCAGAGCT GCCTCCAGGC AACTTGTGGG GCCAAGGCTC TGTGGCTAGA AGGAAGTGAG CATTAATACA 001280
001281 TCACTTAGAA CAGCAAAAAT CATCATCTGA AGATCATCAT CTGAAAAGAT CAGCATCAGA AGAGCTGTGA ATATCACCGA 001360
001361 TCTGATAATT GGGTATTTTT GGTAAAACAC ACACACACAC ACACACACAC ACACACACAC ACACACACGC ACAGATGCAC 001440
001441 ACAGCCCTGC TTTTATGAGA ATTGAGCTTA AATAGATGTG GGTGGAGGTT TTACTGAACT GGATATTTCT TAACTTTTGG 001520
001521 AGTACAACAC CTAGTCTCCT AATTCCTGTC CTGCATAGCG TGCTTACACA GTATTTTAAA ATTAGAGATA ATTAAATTTG 001600
001601 ATTTTGTTTC AATAATTATT TTGACAGTTT TAAAATATCT TTTGGAATTG TTTGTACCAT TCCAGTCCTT TTCAAATCCA 001680
001681 AGACTGAAAT GAATTTTTCT AGCTATTTAT CCCATCTTTG AGTTAAGAAC ATAGGTCCTT GCGTTTCAGT TTAATAGGTG 001760
001761 ATTCTTTAAA ATTTGTTTAT TTATTTAGAA GCAGGGTCTC ACTATGTTGC TGGCTGGTCT TGAACTTCTG GGGTCAAGTG 001840
001841 ATCCTCTCAC CTCAGCCTCC CAAGTAGCTG GGATTACAGG TGTGAGCCAC TGCACCTGGC TCTAATAGTT GATTTTTGAA 001920
001921 ACCATATGGA ACATTTCAAG TTAATAAAAA TTTTTAATTA AAAAATATGT GCACAATTCA CAGATGATCA GTCTTTTGGA 002000
002001 ATTATTATAG AATATTTTTG ACAATAAAAC TATGCTGAAC TCAATCTTTT CTTAATGATT ATGAAGATAT TTTCTGATTG 002080
002081 CAAAACTATG AAAATTAATG GTCATTGTGA TATTGTTGTG AGTCTAGGTC AATGTGGAGT TCTGGAGACA GAATAATACC 002160
002161 TAAAGTAGAT CTGTTTTTTA CTTTGGGAAC TGATTATAAC ACCTGGAAAT TATGTGTTAT ATTATTTAAT TAAATGAGAC 002240
002241 AATGTATATA AATAAACCAA GCATTGGGGC TTGGCACATA GTATTTTTCA GTCAATGAGA GAAGAGTTTG AATATGAAAT 002320
002321 TTTTTATGCA CTGGGGAGTA ACTTCCTAGA TCTATTTCTC TATGTACTTC CTCTCTGTCA ATCTCACTCA TTCAACAATA 002400
002401 CTTACTAAGC ATATACTATT AATATTATAT TGCATTGATT CTAAATCAGA CACATAGTCA CATTTTATTA ACTCTAAAAC 002480
002481 TGTGATCAGT TTTAACATTG CTGGTGGCTT ACAAATACTG TCAGCTAGAA GCAATCATGA TGTACTAGTT GGCTATTCTT 002560
002561 TTTGGTGGCA CAATTGGATA ACTGAGCCCC TTCGTGTTTC TGTCAACTGA CGTTTATGTT TGAGGAAGGC ACATGAATCA 002640
002641 GGGCCATTGT TTGAAATCTA ACCTTTGGCA AAAATCGGTA AGGAACTAGC CCTCAAACTT GCCTAATGGT AGGTGTCAGC 002720
002721 GGCTTGGATG AAAATTCCCA GGGATAATAG AGGAGTACTC TTTTAAGAAA TAGTGTAGCA CCAACACTCT AGATGGTACA 002800
002801 GAAGATGGAT ACTGTGGGAA AGTCAGGGAC ACTGATCACT CTATTTGAAA GGTAATTCAG CAAATTTAGA CTCACACATA 002880
002881 TAAAGAAGTT TAGAAAATTG AACCAATTAC TTTTGTTTAT ATTTTTCTTT TTATGTATGT GTAAGAGATA AGATAAATAT 002960
002961 CTGTGACTAA ATATGTCTCT TATACCAAAT AGAAAAATAT ATCCAAGAAG AAATTATAAT GTCATTGTTT TATTAAGCAT 003040
003041 TATGTCATGC TTTTTGGAGG CATTTCCACC CTTTTTTATC TTTCTTAATG GTATATAAAA TTGCAGTGCA TTTCACCATC 003120
003121 AGTGGTTCAT TGGATTCGGT GAAGTCTAAG TAACTGCTGG ACCTTGCGTT AGGCTTTTTA GATACAATTA ATTAAGCAAA 003200
003201 TATTTATTTA TTTATTTATT TAAATTGAGA TGGATTCTTG CTCTGTCGCC TACGGTGAAG TGCAATGGCA CCATCTCGGC 003280
003281 TCACTGCAAC TTCCGCCTCC CAGGTTAAAG CGATTCTTCC ACCTCAGCTT CCCAGGTAGC TGGGATTACA GGCACTCGCC 003360
003361 ATCATGCCCA GCTAATTTTT GTATTTTTGT AGAGATGGGG TTCTACCATG TTGGCCAGTC TGGACTTGAA CTCTTGACCT 003440
003441 CAGGTGATCC ACCCGCCTTG GCCTCCCAAA GTACTGGGAT TACAGGCGTG AGCCACCACA CCCGGCAGCA AATATTTATT 003520
003521 GAATGCCTAC TGTGTGCCCC AAGCTGTTCT AGGTGCTATA AATGGGCCAG ACAAGCTGTC AGGGAGGTTG CCCTGGCTGG 003600
003601 GAAGACAGAC ATCAGACAAC ATAATTCCAG AGCTGGATAA ATACTAGGGA GAAAAACAAA TGTGTGATGT ATTATAATGG 003680
003681 ATATTGCAAT AAACACTGGG ATTTAAGACA C
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