Lnc-ARFGEF2-2:2

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID	lnc-ARFGEF2-2:2
Source	LNCipedia2.1
Same with	NONHSAT080148
Classification	intergenic
Length	7027 nt
Genomic location	chr20+:47099591..47107082
Exon number	2
Exons	47099591..47099732,47100198..47107082
Genome context
Sequence	000001 GGCCACACTC ATCGTAGCAG AGAGGCAGGA ACAGCTGGGC GAGGGTCCTT CTGTGACATC TACTGCATCA CTGGGCTCTG 000080 000081 TGAAGTGACT CAGCTGCCAG AACTCACACA ATATTCTGCA CCAAAACCTC ACGGGAAAAA TGCATCACGA ACCTCAGACT 000160 000161 TAAACAGCAC AACAGGCTCC TCCCAGGTCT CCAGCTACAC AACCCTCAGA CTTAAACAAC AGCAGCGGCA CCAGCTCCTC 000240 000241 CCTGGGTCTC CAGCTCCACA AACCTCAAAT TAGAACAGCA GCACTGGCTA CACCCAGTCT CCAGCTCTAC ACCTCTAACT 000320 000321 TGAACTACAG CCACCAGCTC CTTCCTGGGT CTCCGGCTCC ACAGACCTTA AACGAAAACA GCAGCACTGG CTCCTCCCCA 000400 000401 GGTCCCCAGC TACAGACCCT CAAACAAGAA GAACAGCAGC ACCAGCTCCA CCTAAAGTCT CCAGCTCCAC ACCTCAAACT 000480 000481 AGAACTTCAG CACCCGCTCC TCCCCGAGTC TCAATATCTG TGACCCTCAA AATAAAACAG CAGGACCAGC TCCTCCTCTG 000560 000561 GTCTTCAGCT TCACGACCTT AACTGTAACA GCACCACCCG CTCCTCCGGG GTCAACAGCT CCGACGCTAA AACTAGAACA 000640 000641 GCAGACCAGC TTCTACCTAA AACACCAGCT CCGAGACTCT CAAACAAGAA CAGCAGCACT GACTTCTCTC ACCAGGTCTC 000720 000721 CAGCTCCACG ATCCTGAAAC TTGAACGGCA GCACCCGCTC CTCCCCGGGT CTCCAGCTCC ACGAACCTCA AACTTGAACA 000800 000801 GCAGCACCCG CTCCTCCCAG CGTCTCCAGC TCCATGAACC TCAAACTTGA ACAGCAGTAC CCGCTCCTCC CCGGGTCTCC 000880 000881 AGCTCCACGA ACCTCAAACT TGAACAGCAG CACTCGCTCC TCCCAAGGTC TCCAGCTCTG CGAACCTCAA ACTTGAACTG 000960 000961 CAGCACCTGC TCCTCCCCGG GTCTCCAGCT CCACGAACCT TAAACTAAAA CAGCAGTACT CACTCCTCCC CAGATCCCCA 001040 001041 GCTGCAGACC CTCAAGCTGC AACAGCAGCA CCATCTCCTC TCCAGGTCTC CAGCTCCATG GACCTTAAAC TAGAACAGCA 001120 001121 GCACCAGCTC CTCCTTGGGA CAACAGCTCC AAGACCCTCA AACTACAACA GCAGCCCTGA CTCCTGCCCA GGTTTACAGC 001200 001201 TCCACAAACG TCAAACTTGA ACTTCAGCAC TAGCTGAAGT CTCCAGCTCC CTGACCCTCA AACTAGAACA GCAGCACCAT 001280 001281 CTCCTCTCTG GGTCTCCAGC TCCACGAACC TCAAACTTGA ACTGCAGCAC CTGCTCCTCC CTGGATCTCC AGCTCCACGG 001360 001361 ACCTTAAACT AAAACAGCAG TACTCGCTCC TCCCCAGGTC CCCAGCTGCA GACCCTCAAA CTGCAACAGC AGCACCATCT 001440 001441 CCTCTCTGGG TCTCCAGCTC CATGGACCTT AAACTAGAAC AGCAGCACCA GCTCCTCTCC TGGTCTCCAG CTCCAGGACC 001520 001521 CTAAAACTAG AACAGCAGCA CCAGCTCCTC CTTGGGACAA CAGCTTTAAG ACCCTCAAAC TACAACAGCA GCCCTGACTC 001600 001601 CTGCCCAGGT TTACAAACCT CAAACTTGAA CTTCAGCACT GGCTGAAGTC TCCAGCCCCA TGACCCTCAA ACTAGAACAG 001680 001681 CAGCACCATC TCCTCTCTGG GTCTCCAGCT CCATGGACCT TAAACTAAAA CAGCAGCACC AGCTCCTCCC GAGGTCCCCA 001760 001761 TCTACAGACC CTCAAACTAC AGCAGCACCA GCTCCACCCA AAGTCTCCAG CTCCCCACCT CAAACTAGAA CTCCAGCACC 001840 001841 CGCTCCTCCC CGAGTCTCAA TATCCGCCAC TCTCAAACAG CAGCACCGGC TCCTCCCCTG GTCTTCAGCT TCACGACCCT 001920 001921 AACTATAACA GCACCACCCG CTCTTCCGGG GTCAACAGCT CCAAGACTCT AAAACTAGAA CAGCAGACCA GCTTCTACCC 002000 002001 AGGTCACCAG CTCCGAGACT CTCAAACTAG AACAGCAGCC TTAACTTCTC GCCAAATCTC CAACTCCACG ACCCTTAAAC 002080 002081 TTGAACTGCA GCACTTGCTC CTCCCCAGGT CCCCAGCTAC AGACCCTCAA ACTAAACAGG AGCACTGACT TCTGCCCACA 002160 002161 TATCCAGCTC CACGAACCTC AAAGTTAAAC TTCAGTACCA ACTCCTTCCC GCGTCTCCAG CTCCACGACC CTCAAACTAC 002240 002241 AATAGCAACA CTGGCTCCCC AATCCCAGGT CTCCATCTCC ACGACCATCA AACTTGAGTT GCAACACTGG CTCCACCCAA 002320 002321 ATTCTCCAGC TCCAGGATGC TAACTGTAAT AGCAGCACCA GCTCCTCTGC AGGTCACCAG CTCCAAGACT CTCAAACTAG 002400 002401 TACAGCAGCA CTGACGCCTG CCCAGGTTTC CAGCTCCATG AACCTCAAAC TTGAACTGCA GCACCACCTC CTCCCTGGTT 002480 002481 CTCCAGCTTC ACGACCCTCA AACTAGAACA GCAGCACCAG CTCCAACCAA AGTCTCCATC TCCACGCCTC CAACTTGAAC 002560 002561 TCCAGCACCA GCTCCTTCCT GGGTCTCATG ATCCATGACC CTGAAAATAA AACAGCAGCA CCAGCTCCTC TCTAGGTCTC 002640 002641 CAGCTCCACG AACCTCAAAT TTAAAAAGCA GCCCTGGCTC TAACCCAGGT CTCCAGCTCC ACCATCGTCA AACTTGAACG 002720 002721 GCAGCACTAG CTCCTCCCAA AGTCTCCAGC CCCACGACCC TAAAACATGA AGAGCAGCAT TGGCTCCTCC CCAGGTCTTC 002800 002801 AGCTTCACAA CCCTAACTCT TACAGCAACA CCCGCTCCTC CCCAGGTTGC CAGCTCCAAG ACCCTAAAAC TAGAACAGCA 002880 002881 GACCGGCTCC TACTCAGGAC ACCAGCTCCA AGACTGTTAA ACTAGAACAG CAGCACTGAT TTCTCACCAG GTCTCCAGCT 002960 002961 CCACGACCCT CACACTGGAA CTACAGCAAC AGCTCCGCCC AGGTCTCCAG CTCCAGGGAC CTTAAACTAA AATAGCAGCA 003040 003041 CCAGCTCCTC TGCAGGTCCC CAGCTACAGA CCCTCAAACT AGAATAGCAG CACCATCTCC TCTCCAGTTC TCCAGCTCCA 003120 003121 CGACCTTGAA ACTAGAAAAG AAACACTGAC TCCCCCCCAC CACCAATCTC CATCTCCAGG AACATCAAAC TTGAACTACA 003200 003201 ACAGCGGCTC AACCCAAAGT CTCCAGCTCC CCGACACTAA CTACAACAGC AGCACCAGCT CCTCCCTGGC TCACCAGCTC 003280 003281 CAAGATCCTC AAACCAGAAC AGCAGCACTG ACTCCTGCCC AGGTCACCAG CTCCAAGACC CTCAAACCAG AACAGCAGCA 003360 003361 CTGACTCCTG CCCAGGTCAC CAGCTCCAAG ACTCTCAAAC TAGAATAGCC ACACTGACTC CTGTCCAGGT CACCAGCTCC 003440 003441 AAGACTTTCA AACTAGAATA GCCACACTGA CTCCTGTCCA GGTTTCCAGC TCCATGAAAC TCAAACTTGA ATTGCAACAC 003520 003521 TGGCTCCTCT CCAGGTCTCC AGCCACTCAT CCCTCAAACT GTTGCTCCTC CCTGTGTCTC CAGCTTCATG ACCCTCAAAC 003600 003601 TTGAACTGGG GCACCCGTTC CTCCCCGGGT CTCCAGCTCC ACGACACGTG AACTGCAGCA CTTGATCCTT CCTGAGTCTC 003680 003681 CAGCTCCATG ACCCTTATAC TTGAACAGCA GCACCAATTC CTGCCCAGGT CTCCAGCCTC ATGACCTTCA AATTTAAAAA 003760 003761 GCAGAACTGG CTCCAACCCA GGTCTCCAGC TCCACCATCA TCAAACTTGA ATGGCAGCAC TAGCTCGCCA CAAAGTCTCC 003840 003841 AGCTCCCATG ACCCTCAAAT GTGAACAGCA GCACTGGCTC CTCCCCAGGT GTTCAGTTTC ACGACCCTAA CTATTACAGC 003920 003921 AACACCTGCT CCTCCCCAGG TCACCAACTC CAAGACCCTA AAACTAGAAC AGCAGACCGG CTCCTACCCA GGTCACCAGC 004000 004001 TCCAAGACTC TCAAACTAGA ACAGCAGCAC TGACTTCTTG CCAGGTCTCC AGCTCCATGA CCCTCAAGCT TGAACCGCAG 004080 004081 CAACAGCTCC ACCCAGGTCT CCAGCTCCAC AAACCTTAAA CAACAGCACC GGCTCCTCCA GAGGTCCCCA GCTACAGACC 004160 004161 CTCAAACTAG AACAGGAGCA CTGACTCCTG CCCAGATATC CAGCTCCACG AACCTCAAAC TTGAACTGCA GTACCAGCTC 004240 004241 CTTCCCGGGT CTTTAGCTCC GTGACCCTGA AAATAAAACA GCAGCACTGG CTTTTCCCCA GATCCCCAGC TCCACGACCC 004320 004321 TCAAATTTAA AAAGCAGCAC CAGCTCCTCC CTGGGTCAGC ACCTCCATGA CCCTCAAACC TGAACTGCAG CACTGGCTCC 004400 004401 TCCCCGGGTC ACCAGATCCC AGACCCTCAA ACTAGAACAG CAGCACTGAC TCCTCCCCAT ATCTCCAGCT CCATGACCAT 004480 004481 CAAACTTGAA GACTAGCACC ATTTCCTTTC TGGGTCTCCA GCTCCACGAC CCTCAGACTT GAACAGCAGT GCCAACTCCT 004560 004561 TTCTGGGTCT CCAGCTCCAC TATCTTCAGA CTTGAACAGC AGCACCAGCT TCTCCCCAGG TCTCCAGCTC CATGACCCTC 004640 004641 AAACAGGAAC AGCAGCACCG GCTCCTCCCT GGGTCTCCAG CTCCTCAAGT CTGAGGATCA TGGAGCTGGA GACCCAGAAA 004720 004721 GGCAATGGTG CTACTCTTCA AGTCTGAGGG TCATGGAACT GGAGACCCGG GGAGGAGCTG GTGCTACCGC TGTTCAAGTT 004800 004801 TGAGCATCTT GGAGCTGGAG ACCCAGGGAG CCGCCACTCG AACGGTAGCT CCTCCCCCAG TCTCTAGCTC CATGACCCTC 004880 004881 AAACTCGAAG AGTAGCACCA TTTCCTTTCT GGGTCTCCAG CTCCATGACC CTCAGACTTG AACAGCAGCA CCAGCTCCTT 004960 004961 TCTGGGTCTC CAGCTCTCCT ATCTTCAGAC TTGAATGGCA ACACCAGCTT CTCCCCACGT CTCCAGCTCC ACGACCCTCA 005040 005041 GACTTCGACA GCAATCCGGC TCTTCCCCTG GTCTCCAGCT CCATGACCCT CAAACTAGAA CAGCAGCACC GGTTCCTTTC 005120 005121 TGGGTCTCCA GCTCCACGAT ATTCAGACTT GAATGGCAGC ACCAACTTTT CCCTGGGTCT TCAGCTCCAT GACCTTCAGA 005200 005201 CTTGAACGGC AGCACTGGCT CCTCCCCTCT CCAGCTCCAT GACCTTCAGA CTTGAACGGC AGCGCCGGCT CCTCCCTGGG 005280 005281 TCTCGAACCT GCCCAGCCTG CAGATTTTGG ACTTGCTAGC CTTCAGGATC ACATTAGCCA ATTCCTTAAA CTCAACCTCT 005360 005361 TTCTCTGTAT GTAGGATATG GACACCTCCT GCTGGCTCTT TTTCCGGAGA GCCCAGTGAA CACACCGTGC ATCAGGCTCC 005440 005441 ATCATTCACC AGAGCGTCTT TCCAACAGAC TTTGCTGTGA TATTTCTTAA ATAAAGGTCA CTCCAAAGAC CCTCACCTCT 005520 005521 GGATTGTAAC CAACTCAGTG GCAGACTTAA TCCATTTCTA TCTGCTGACA TTTCTCACAT GGAATAGGCT GTTTGACAGA 005600 005601 TTGAAGCTGT CTCCCCCCAC TCCCCAGGCC AGTGCACACT TATCTCCCTT GAATGTTCAT TTTGTGCTCA TTTTAGAGAC 005680 005681 TGAGGCACAA AGACAGGCAA ATACAAGGTG AAGTCAGTGA CAAATAAACA ATGCTATTTA GGCATTGAGA GTTTGTTTTT 005760 005761 GTGTTTGTGT TTTTTTGCTA ATTAATTCCA CCTGGTAGAG GAGGGCGAGG GGAAAGAGGA AGGGAGAAGT TTCCTGGCAG 005840 005841 GGCTGAGAGG CAGAATGGTG CCTGCACCTC CTGGAGTGCA CGGCAATGGT CTGGCTCTGC TGCCTTCTAT GGGTAAGGGC 005920 005921 CCACCGGTTT TTTTTCTGGG ACTTAAGTCA CCTGGGCTTA TACTGAGCAG CCCTCAGCAA GCTCTTCTCA CTTGCCCCTG 006000 006001 CCACCCAGAG CTCCAGGATG CCCTAGTTCC TGCCCCTCAA AGACCTGGGA CTCCTGCTCC TGGGACCTTC TGGTCGGTTC 006080 006081 TGCTTTTCCT TGCTTCAGGA CCTTACGTGG ATTCTGTCAC CTGCCACCTC AGAACTCTGA GCGACACACC CACTGCATGT 006160 006161 CACCCAGGAC AGGTTCACCC AAGTCTTTCA TCCCAAGAAG GTCCTTCCTG GCACCTTGTG GGCTGACAGC ATCTCCAGGG 006240 006241 AACCACAGGA CTTCGAGGGG GCCTGGGAAG CATCAAGAGC TTCAGGAGGG GAGTCTGTCA CAGGTGGGGA TTACGGAGCC 006320 006321 CTGCAGGGAC CCTTAGAACA GGTGGGTCGG GGTGGGGCTG AGGTCTCGAC GCCTTGATTC AGGTTCCTGG CTTATGTCGA 006400 006401 CCTGTCTGAA ATCTCCCACC CACAGCCAAG CCACTGGCCA CCCCACTGCT GCCCTGTGTC ACCCTGTTTT GATGGAGAGC 006480 006481 TCACCAGGCT CTCCCAGCTG CTCTCCTCTT GGAGCAGGGA GTGTTGGAAG TGGGGGGCTG ATCTGCATAT GAACGTGGCT 006560 006561 CTTAACCAGG TGAGGGGCTT GAAGTCCTCT GGGGCTAATG ACTGTTCCAT GAATAATGGT CCCTCTTAAA ATGTAATTAA 006640 006641 ACATTTATCA GATGTATTTC TACAGAAACA TCCATCTTAA GGGGGGACCG GATTTCCTAC CATTCATATC AGTCTCCTGA 006720 006721 AATGAGGCAG AGGCACTCCC GGCTCCCCCT CCCCTCCCCG GCCTCAGTTC CCTGGGCCGG ATGTCCTGCT GGGGCCTGTG 006800 006801 GTGCAGTTTC GGCTGGTTCA CCCCATGCAG AGCTTGATGG GGTTGGGTTG GTTTTAATCA GAATGGTAAA TTGCAAATGA 006880 006881 TACAGGGCCT GGGCTCTGTT GGGATACTTG TGTTGACCAA GTCCCTTGTG AATTAAATCA TTTAATACTG GAAATGGAAA 006960 006961 AGGCCCCCTC ATTTTCCTTC TGAATGAGCT GTGAAATAGG CTCTGAGAAC GGCCTCCAGA GTGAAGT

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