Lnc-ASXL1-1:1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID	lnc-ASXL1-1:1
Source	LNCipedia2.1
Same with	NONHSAT079354
Classification	intergenic
Length	4986 nt
Genomic location	chr20+:30940478..30945985
Exon number	2
Exons	30940478..30941643,30942166..30945985
Genome context
Sequence	000001 GGGTGTAAGT TGATGTTTTT ATTATAAATC ATGGGAAACA AAGAAATAAC CCATTCACCG CTCTCATCAC TTGGGCACAC 000080 000081 CACCCGCTCA GCATTTTGAT GTTAAAATAC ATTTTAAAGG TTCTTTTCCT TCTTTCACAG AGGAAATAAT AGAGGAAATG 000160 000161 GCTTAAACTG AGGCCAGAAG CATTATGGTG GATGTGAGTA AATCTCTGCA TTATTAAGAG AGATTAAAAA TTGGGATGGG 000240 000241 TACCTTATTG AGGTCCTGAA ATCTATACTT GAAAACCTTA AAGCATCAGA GAGCTGCCAT TTTCCGTGAT TTCGGTAAAA 000320 000321 AGCAGCTCAG GTTATCCTTC CTTTGAGGCC ATTCTAGGGG GTCCCACAAA TCTTTTTAAG CAAAATAAAA ATATTAATAA 000400 000401 TTATTAAAGT TGTTTTCACA TTGTTGAGGT ATATTGCATT AAGAATGGAA TTTGTTTTTC CATCATAAAA GTAGCACATA 000480 000481 CTAATTCTAG GTTTTGAAAA TACAAATATA AAAAAGAAAA AATATTACCC ATAGCTACTA CCTTAATCTA AATGTTCTAT 000560 000561 GTTTTGCGGT TGAAATGAAA AAGAATTTTT TTCAATTAAA AAGTGTAATA TGGGCCGGGC GTGGTGGCTC ATGCCTATAA 000640 000641 TCCCAGCACT TTGGGAGGCT GAGGCAGGCA GATCACTTGA AGTCTGGAGT TTGAGACCAG CCTGGCCAAA CATGGAGAAA 000720 000721 CCCTGTCTCT ACTAAAAATA CAGAAATTAA CCTGGTGTTG TGGCACATGC CTGTTATCCC ACCAACTGAG GTAGGAAGAT 000800 000801 TGCTTGAACC TGGGAGGCAG AGGTTGCTAT AAGCCAAGAT CATGCCACTG CACTCCACCC TGGATGACAG AGCAAGACTT 000880 000881 TATCTCAAAA ACAAAAGGTA ATATGTCCAT GGCTCACAAC TGTAATGCCA GCACTTTGGG AGGCCGAGGC AGGAGGATCA 000960 000961 CTTGAGGTTA GGAGTTCGAG ACTATCCTGG GCAACATAGC GAGACCCTGT CTCTACAAAA AATTTAAAAA AAAAATTAGC 001040 001041 TCGGGGTGGT GGGATGTGTC TGTGGCCCTA CCTACTCCTA GCTACTCAGG AGTCTGAGGT GGGAGGATGG CTTAAGCCCA 001120 001121 GGAGGTCAAG ACTGCGGTGA GCCATGATCA TGCTACTGCA CTCCAGAGTA GCTGGGACTA TAGGCACATG CTGCCACGCC 001200 001201 CAGCTGAAGT CATGCTCTCT ATCCATGAGC ATCTTTATAA CTTGCATAGA TATATTTGGG TGAAATCCTG TCTTGGTCTT 001280 001281 TCCCGATTCT CCCTGAGCAG GTTCCAAACA TTGTTTAGGG CTCAAAGGGA AATTAGTCTT CAGAGTTTCT CCAGTAAAGT 001360 001361 AATTACGGAG ATCGGGTCAT TTATTCAACA GATTGGGTGC CTACCATGTG CCAAGACTGT GCCAGGCACT GGGGATATGA 001440 001441 TGATGAAACC AAAGATGCTA GCATGAACAC AATCACTAAA CCAAAGTCAC ACAAATAAAT TAAATGTGGG AGGGACAAGG 001520 001521 AGAGCTATAC ATGTACTGAT CATCTGCTAT GCTGGAAGTT TATTTAGCAA ATGTAATCTT ATTTAATCAT CTGGACCCAA 001600 001601 GGGAGGTAAT CTGACCTCTC TGAATCTCAG CTTCATGTGA AAACGGGGAT AATATTATTG AGAGAGAACA TTTGTTACAG 001680 001681 GGGCAAACCC TGTTCCAAGG TTTCTTTCAC TCAAAGTATA AACAATGAGG CACTTTTTAC ACTTTAGACA CTAAAACTTT 001760 001761 TTGGAGGCAA AGAGGGCTGG TATTTAGTGA GTATCTGCTA TGTGCTAGGC ACTTTACAGA GATCTCATTT AATCTCAGTT 001840 001841 CCATTCTTTG AATTTGCTAT GTACCCTGCT GTCCAAATGA CGGCACTGAG TCAGTGAGAG GTTTCATAAC TTGCCCAAGG 001920 001921 CCACAGAACT GGATGGAGAA AGACTGCAGA GATTCAAACC CAGGCCTGCT GACATGCAGA GCCAATGAGA ATATATTATC 002000 002001 TTGCAGTGCA GTTTATGGGA TATATGTGTC CCTTTGGGAA TTCCTGGGTG TCTGCTGGTG GCCTGTTAAC TTGGTTCTTG 002080 002081 AATATGCACT TTGCTTATAA CTGTGCAGTT TGAAAAGTGA CTCATCCCCA AACTAGGCAG GGTTGAGTGT CTGTCCTGTT 002160 002161 TATCTTCCAC ATGCCACCTG CACTAACTTC TGAAGATAAT CTATAATAAA AGCACTGTGA TTAAAAAACA GAAAAACACA 002240 002241 CACCAAAAAT GTATAGGTTT GTCTGTTGGT GCTTCTGACA AGAAAATAAA CTCATGAATC TCATTAACTT TAAAAAAATC 002320 002321 ACATCTACTT AAGGTTTAAT GACTAAAGCC AACTTTCTAA CATATCTGTA CCGTTCTCTG AACATACTGT TTTCACACTT 002400 002401 AACTACGATG TTGTCACTTG TTTCTGTCTG ATTCTGCAAG GGCAGAGACC TTGAAATATT CAAATCTGGA TTCCCCCATG 002480 002481 GTTTGACCCA GCTGAAGTCA GGCAGTGTTC GCTGAAAGAA ATAAAGGTGT TTCCATAATG CCTGTATTAG CTTTCTTTTG 002560 002561 GGGCTGTAAG AAGTTACCAC AGATTTAGTG TCATAAAACA ATATTCATTT CTGTTTCACG CTTCTTGTGG GCCCGACGTC 002640 002641 TGGATTCCAT GGCTCAGCTG ATTCTCTGCT TCCAGTCTCA CGAGGCTGAA ATCAAGGTGT CTATATTCCT TTCTAGAGAG 002720 002721 TTGGGGAGGG GGTATAATCT GTTCCCAAGT TCATTCAGCT TGTCAGAATT CAGCTCTGTG AGGTTGTAGG ACTGAAGTCC 002800 002801 CCATTTCCTT GCTGGCTCTT GGCAGGACTT CCTCTGAGCT TTTGGAGGCT GCCTGGATTC CCTGGCTTGT GGCCACTTTC 002880 002881 AAAGCCAGTA ACAGTGGGTT GAATTCCTCT CATACTTTGA ATTTAATTCC TCTGCCTCAT CTCTCCAAAA CATCTCTTTT 002960 002961 GCCTCCCTTT TGTGCTTTTA AGGGTTCATG TGATTACACT GGGCTCACCC ATATAATACG GAATCATCTA ATTTTAAGGG 003040 003041 CTTTATTTCC ATTGGCAAAA TATCTTTTGC CAAAGAATGC TGGCTGGTAA TCCCAGCACT TTGGGAGGCC GAGATGGGTG 003120 003121 GATCACCTGA GGTCAGGAGT TCAAGACCAG CCTGGCCAAC ATGGAGAAAC CCAGTCACTA CTAAAGATAC AAAAATTAGC 003200 003201 TGGGCATGGT AGCGCATGCC TGTAATCTCA GCTACTTGGG AGGCTGAGGC AGGAGGATCG CATGAACCCA GGAGGCGGAG 003280 003281 GTTGCAGTTA GCCAAGATCA CGCCACTGCA CTCCAGCCTG GGTAACACAG CGAGACTCTG TCTCAAAAAA TAAATAAATA 003360 003361 AATAAATAAA AAAGCAACAT ATTCACAGGT TCCAGGGACT AGGACTTGGA CAGTTTTGGG CAAGCGGGGA AGACATTATT 003440 003441 CTGTCTACCA CAGTACCTGT ATTAAACATG TAAATTTCAG TTATTCCCTG TAGGTCAGAG GGCAGTAAAG CTACTTCAGA 003520 003521 AGACATCGGA AAGAAGCCAA ATGACTTGCC AAAGAGTACT GTATCAGCCG TAGATTGAAA AAAAAGAAGT TAAAAATCCT 003600 003601 TTGTAAAAAA TCAAGGCAAA CAGTTTTTTG AGGGACAGTA GTTCCTCCTT TCTCTCAGGG TAAAGCTAGA GAGATTTTTA 003680 003681 AGAGGTGTCT TATTCTAACT TGCAGTCTTT TCCCTTTGTA GGATTTTGCT TACCGGACTC ACAAGTTTTC TGTGACCAGT 003760 003761 ATTAGAAGCA GAAAACACTG AACCCCTTGG CGTTAGAGTT TGGGCTACAC CATAATGGTC TCCTATCAAT ACTGGCTCTC 003840 003841 GCTACGTGTT AACATTAGGG AGTGGAGAGT GTGTTTCCTC ACCCAGGGAA ACCGTTTAAA TGTGGCCACT GATCCTGCCT 003920 003921 TCATAGTTTT TAAGAGCTGG CATCAATCCA ACTCCGGACG GACTCTAGAA ATGTTTCTGG ACAACGACTG AACCTATAGT 004000 004001 TACAGAAAAC CTATGTGCTG GGCGCTCTGA ATTTCATTTC AGGTTCTAAA ACTAAGGCTC AGAGAGGCTA AGTATATTGC 004080 004081 CTATTGTTTC TCAGCTGGTA ATAACAGCTA CCATTTATTA AACATTTGCT CTATGCCAGG CGCCATATCA TACGGACCTG 004160 004161 ATAATGTCAA GATCTCCCTT CACATCCTCT TCCAATCTGT CAAGAATTGT ATGTTAATTT TAATTCCAAT AATGCCATGA 004240 004241 AATACAAGAC AAATGCAGAT CAGAAAACTG AGGCTCAGAG AGGTTGAGTG GACAGCCAGG GAGTGACTCA GCCAAGATTC 004320 004321 CAGTCTAGGT CCGCTGGACT CCAGGGCCTG AATTCTCTCC AGGGTACTGC CTCTAAAAAC GCCCTCAGGT GCATTCTGGT 004400 004401 CAGTATGGCC CCAGAGTCCA AGTTCTTTAC ACGACCCGTC AACATATCAC CAAGTTCCTA AGAACGCTCT AGGCTGCTGG 004480 004481 TGCAGGCTCT GCAAATACAC AGCGGCCTGA AAGCACAGGA AGAAATGAAG AACCGTCTAA GTCCATCAGC CGTGGAATAA 004560 004561 CCGTTTTACT GGTATGAGGG TCTTTTTGTC TCATTATTAT GTGGCAGTGA GTCATTTAGA GGTGACCAAA AGGGAAAGTC 004640 004641 CTGCCTCTCG TCCCCTACGA GAAGTGTAGG TAAGAACCGT TTAGGCGAGG AGAAGCACGA AGTGGGAACT GCGAGTCGAG 004720 004721 CTCCCCATCC TCACTCCCCA CCCGCACCCG CCAGGAGGTC CTGAAGCAAA AAGCACCGAA GGGGTTAAGG GTGGCCGGGG 004800 004801 GAGCCCAGCC ACCGCCCCTT CCCAGCATCG CCTCCCAGAA TCCCGCAGGC CCCCAGCCAG TTCTCGCACC TCGCGAGACT 004880 004881 CCACCCAGCC CCTTCCCCGA ACAGCGACCC GTCCCCGTTC CTAGCTGAGG TCGGTGCTAG GCGGAGGACG CGAGAGGGAG 004960 004961 AGCGGAAGGG GGCCGCCGGG CACGCC

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