Lnc-GJA10-3:4

Same as ENST00000551025.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID	ENST00000551025.1
Source	Gencode19
Same with	lnc-GJA10-3:4
Classification	sense
Length	7344 nt
Genomic location	chr6+:90539650..90581122
Exon number	9
Exons	90539650..90541058,90556281..90556363,90562885..90562953,90564536..90564636,90565189..90565263,90566803..90566918,90571845..90574090,90575672..90578801,90581008..90581122
Genome context
Sequence	000001 GCGGGTAAGT TGTCGTAGGG GCCCGGTCCG TGAGGGACTG CTAAGGAAGA GGCTGCATGG CGCGGTAGTC CCCCGAGTGG 000080 000081 AGGTCGGCTG CCCCTGGGAA ACCAGAGAGT CGGAGGGAGT CCATCTGGAG CGGCCAAGTA GGTCGGGGAA GGGCCGCGCC 000160 000161 TGACGTCTGG CCGCAGGTAG CCACGTTCCC TCCGCCCCCG GTGCAGCTTC AGGGCTTGCA CCCTGCGTCC CTCTGTGGTC 000240 000241 CTTCGAGAGG GTCTGGGCGG GGACTATGGG TGGGCGCGCC CAGGAATTGT CCCTTCGGCC TCTCGTCCTG CCCCTCCCCC 000320 000321 CCACCATCCA GTCTCTCCTT GGAATATACT CTTAAAATCT TTCGGATGGA GTTCTTTGGA GAAATGGGTT TCCTGGAGTG 000400 000401 TCAGGTGATC ATTGATGTTG ATTGTTTCTG AAATGTTTAT TTAGGCATCA AACCAACATG CCTAAATAAG TTTTTCATTT 000480 000481 CTACAGCGCC TAGATTCATT CCTAGCACAT AGTAGGCCCT AACTCAGATG TGAATGTAGG ATTCGTAGGA GCTGAGCATT 000560 000561 TGTGCTTCAG GCATCAAGTT GTCTTTGACT CTTCGACTCT TCCTTGGTCT TTTTCCATTC TCCACACCTC CAGCAGCAAA 000640 000641 CCTTTCGCCT CTCCTCAAGG CCTTTCCCCC CCATCTCCCT CAGCGCCTCT TTGACTGGAG GGGGACAGAG GCTTTCATGG 000720 000721 CAGGGATTCT CCCATCTCCC TTCCTATCCC CGCTATGCCC TCCAATTATC TTTTCCTGGC GTTCCGTTTT ACAAGAGATG 000800 000801 GCCTTCTTTC CAAAAACATT TATATTGTAT TGAATATTCT TGATTTTGGC CATCTTGCTT TACAGACAGA CCTGGGGTCT 000880 000881 AATTTCAGCT CTGCCACTTA CCAGGTGGTT GCCTTGTGCA AATTTCTTGA TCGTCTGTGT TTTCCTCATC TGTAAAATGG 000960 000961 GGAAAAGAAT AATATGGACC TCATAGAACT CTGGGGAGGA TTTAAACTAA GTGAATAATG TATTTAGATC ATTTAGGTTA 001040 001041 GTGCCTGGAA CATAGTAAAT GTGCCGTATA TGATAGCTTT TGTTAGTATT TGCCCCTTAC CTCTTCTTCT GGGGTCTTGC 001120 001121 TGTATTAGCC TTTCCCATGA GTGTAAAAAT ACACTGTCTT CTCTGGCTTT TTCCTGTTTT TCTCTACAAA TGCTTGTGTT 001200 001201 TTTCTCTAAA TTTTATTTTT TGTCTTTTAG CGTCTACATT AAGGACACAT TCTCAGTTTC GTAATGATTT TTCTTTTTCT 001280 001281 TTTTTCCTTT TTTTTTGAGA CTATAGCCCA GGCTGGAGTG CAATGGCAAG ATCTCGGCTT ACTACAGGTT TGACCTCCTG 001360 001361 TGCTCAAGCA ATCCTCCCAC CTCAGCCTTC CAAGTAGCTG GAACTACAGG TGGTGACTCT CAAAAGGAAA TAGGATCATG 001440 001441 GCAGCAGATG ATGACAATGG TGATGGAACA AGTTTATTTG ATGTCTTTTC TGCTTCTCCT CTTAAGAACA ATGATGAAGG 001520 001521 CTCACTGGAC ATATACGCTG GGTTGGACAG TGCTGTTTCT GACAGCGCTT CCAAATCCTG TGTACCATCA AGAAATTGTT 001600 001601 TGGACTTATA TGAAGAGATC CTGACTGAAG AAGGAACTGC AAAGGAGGCA ACATATAATG ATTTGCAAGT AGAATATGGA 001680 001681 AAATGTCAAC TACAAATGAA AGAGCTGATG AAAAAATTTA AAGAAATACA GACACAGAAT TTCAGCTTAA TAAACGAAAA 001760 001761 CCAGTCTCTT AAGAAGAATA TTTCAGCACT TATCAAAACT GCCAGAGTGG AAATAAACCG CAAGGATGAA GAAATAAGTA 001840 001841 ATCTTCACCA AAGATTGTCT GAGTTTCCAC ATTTTCGAAA TAATCATAAA ACTGCAAGGA CATTTGATAC AGTTAAAACA 001920 001921 AAAGATCTTA AATCTAGATC TCCACATTTG GATGATTGTT CAAAGACTGA TCACAGAGCT AAAAGTGATG TTTCTAAAGA 002000 002001 TGTACATCAT AGCACTTCAC TGCCAAATCT GGAAAAGGAA GGAAAACCAC ATTCTGATAA AAGGAGTACT TCACATTTAC 002080 002081 CTACATCTGT TGAGAAACAC TGCACTAATG GTGTTTGGTC ACGTTCTCAT TATCAGGTTG GCGAGGGTAG CTCAAATGAG 002160 002161 GATAGTAGAA GAGGAAGAAA AGATATTAGA CATAGCCAGT TTAACAGAGG AACTGAAAGA GTACGAAAAG ACTTAAGTAC 002240 002241 TGGCTGTGGT GATGGTGAAC CAAGGATATT GGAGGCTAGT CAAAGGCTAC AAGGACATCC TGAGAAATAT GGTAAAGGTG 002320 002321 AACCAAAGAC TGAAAGCAAA AGTTCGAAGT TTAAAAGTAA CTCAGATTCT GACTATAAAG GTGAACGCAT TAACTCTTCT 002400 002401 TGGGAGAAAG AGACCCCTGG AGAAAGGTCA CACAGTCGAG TAGACTCTCA AAGTGACAAA AAACTAGAAA GACAAAGTGA 002480 002481 AAGATCACAA AATATAAATA GGAAAGAAGT TAAATCACAA GACAAAGAAG AAAGAAAAGT TGATCAAAAA CCTAAATCAG 002560 002561 TAGTAAAGGA CCAAGATCAC TGGAGAAGAT CTGAACGAGC ATCACTTCCT CATTCCAAGA ATGAAATAAC ATTTTCTCAT 002640 002641 AATTCAAGTA AATACCATCT AGAAGAGAGA AGAGGATGGG AAGATTGTAA AAGAGACAAG AGTGTAAACA GTCATAGTTT 002720 002721 TCAAGATGGA AGATGTCCAT CTTCTCTTTC AAACAGTAGA ACTCACAAAA ACATTGACTC TAAGGAAGTT GATGCCATGC 002800 002801 ATCAGTGGGA AAATACACCT TTAAAAGCAG AAAGACATAG AACTGAAGAT AAGAGGAAAA GAGAACAAGA AAGCAAAGAA 002880 002881 GAAAATAGGC ATATTAGAAA TGAAAAAAGA GTACCTACAG AACATTTGCA GAAGACTAAT AAGGAAACTA AGAAAACCAC 002960 002961 TACTGATTTA AAGAAACAGA ATGAACCAAA GACTGATAAG GGAGAAGTCC TTGATAATGG TGTTTCTGAA GGAGCAGATA 003040 003041 ATAAAGAGCT TGCAATGAAA GCTGAGAGTG GTCCAAATGA AACAAAAAAC AAGGACCTAA AATTGAGTTT TATGAAAAAA 003120 003121 TTGAACTTAA CTCTTTCTCC TGCTAAAAAG CAACCTGTTT CCCAGGATAA TCAGCATAAA ATAACTGATA TTCCCAAGTC 003200 003201 CAGTGGTGTA TGTGATTCAG AGTCTTCAAT GCAAGTTAAA ACAGTGGCAT ATGTTCCCTC CATAAGTGAA CATATCTTGG 003280 003281 GGGAAGCAGC TGTCAGTGAA CATACCATGG GGGAAACCAA GTCAACGTTA TTGGAACCAA AGGTTGCTCT TCTAGCAGTG 003360 003361 ACTGAACCCA GGATCGGTAT CTCAGAAACC AACAAGGAAG ACGAAAATAG TTTGTTAGTT AGGTCTGTTG ACAATACTAT 003440 003441 GCATTGTGAA GAGCCCATTT GTGGTACAGA GACTTCCTTC CCATCTCCTA TGGAAATACA ACAGACAGAA TCCTTGTTTC 003520 003521 CATCAACAGG AATGAAACAA ACCATTAATA ATGGAAGGGC AGCAGCTCCT GTGGTAATGG ATGTATTACA AACAGATGTG 003600 003601 TCTCAAAACT TTGGCTTGGA ATTGGATACC AAAAGAAATG ATAATTCAGA TTATTGTGGT ATTTCTGAAG GTATGGAGAT 003680 003681 GAAGGTGGCA CTTTCAACAA CAGTGAGTGA AACCACTGAA AGCATTTTGC AGCCTTCAAT TGAGGAAGCT GATATTTTGC 003760 003761 CAATAATGCT TTCAGAAGAT AATAACCCAA AATTTGAGCC TTCTGTTATA GTTACACCAC TGGTTGAGAG TAAGTCGTGT 003840 003841 CATCTGGAGC CTTGCTTACC TAAAGAGACT CTAGATTCTT CACTTCAGCA GACTGAGTTA ATGGACCACA GAATGGCAAC 003920 003921 TGGTGAAACA AACTCAGTAT ATCATGATGA TGATAACTCG GTTTTGAGCA TTGACCTTAA TCACCTGAGA CCTATTCCAG 004000 004001 AAGCCATCAG TCCTCTGAAT AGTCCAGTGA GACCTGTAGC AAAAGTTCTT AGAAATGAAA GCCCACCTCA AGTTCCAGTG 004080 004081 TATAATAACA GTCATAAAGA TGTGTTTTTA CCAAATTCAG CTCATTCTAC CTCTAAGAGT CAGTCTGATC TCAATAAGGA 004160 004161 AAATCAAAAG CCAATTTACA AATCTGACAA ATGTACAGAA GCAGACACAT GTAAGAATTC ACCATTAGAT GAATTAGAAG 004240 004241 AAGGAGAAAT TAGAAGTGAT AGTGAAACAT CTAAACCACA AGAAAGTTTT GAAAAAAATT CCAAACGTAG AGTGTCAGCT 004320 004321 GATGTGCGGA AGTCAAAGAC TATCCCACGA CGTGGGAAAA GTACTGTGTG TTTAGATAAA GACAGTAGGA AAACACATGT 004400 004401 AAGAATCCAT CAGACCAATA ACAAATGGAA TAAAAGACCT GATAAATCTA GCAGATCTTC AAAAACAGAG AAGAAAGATA 004480 004481 AAGTGATGAG CACTTCCAGC TTGGAAAAAA TAGTTCCAAT TATTGCTGTA CCCTCTTCTG AACAAGAGAT CATGCACATG 004560 004561 TTACGAATGA TAAGAAAACA TGTAAGAAAA AATTATATGA AATTCAAGGC AAAATTTTCA TTAATACAAT TTCACAGAAT 004640 004641 TATTGAGTCA GCAATTTTGA GTTTTACATC TTTAATTAAA CATCTCAACT TACACAAAAT CTCTAAGTCA GTGACTACCT 004720 004721 TACAGAAGAA TCTCTGTGAT ATTATAGAGT CTAAACTTAA GCAAGTTAAA AAGAATGGCA TAGTTGATCG TTTATTTGAA 004800 004801 CAGCAACTAC CAGATATGAA AAAAAAATTG TGGAAGTTTG TAGATGACCA ACTTGATTAT TTGTTTGCAA AGCTTAAGAA 004880 004881 AATCTTAGTA TGTGATTCCA AAAGCTTTGG AAGAGATAGT GATGAAGGCA AACTTGAAAA AACAAGTAAA CAGAATGCAC 004960 004961 AGTATTCAAA TAGTCAGAAA AGGAGTGTGG ACAACTCCAA CAGAGAATTG CTGAAAGAAA AATTATCAAA ATCAGAAGAC 005040 005041 CCTGTTCATT ATAAGTCTTT AGTGGGATGT AAAAAATCTG AGGAAAATTA TCAAGACCAA AATAACTCCA GTATTAACAC 005120 005121 TGTAAAGCAT GACATTAAAA AAAATTTTAA CATCTGCTTT GATAATATAA AGAACTCTCA ATCCGAAGAG CGCTCCTTGG 005200 005201 AAGTACACTG TCCAAGCACC CCAAAGTCAG AAAAAAACGA AGGAAGCAGC ATAGAGGATG CACAGACATC CCAGCATGCA 005280 005281 ACTTTGAAGC CAGAACGAAG TTTCGAGATT CTTACCGAAC AGCAAGCATC GAGCCTTACT TTTAATTTAG TGAGTGATGC 005360 005361 ACAAATGGGT GAAATATTTA AAAGTTTGTT GCAAGGTTCT GATCTTTTAG ACAGCAGTGT TAACTGTACT GAAAAAAGTG 005440 005441 AGTGGGAGTT AAAGACTCCA GAGAAGCAGC TGCTAGAGAC TCTTAAGTGC GAGTCTATAC CAGCTTGTAC AACAGAAGAG 005520 005521 CTAGTTTCAG GGGTGGCTTC TCCATGTCCT AAAATGATTA GTGATGATAA TTGGTCATTA TTATCATCTG AAAAAGGTCC 005600 005601 ATCTCTGTCT TCAGGGCTTT CATTGCCGGT TCATCCTGAT GTGTTGGATG AAAGTTGTAT GTTTGAAGTG TCTACTAACC 005680 005681 TACCTTTAAG TAAAGATAAT GTGTGTAGTG TAGAAAAGAG CAAGCCCTGC GTTTCTTCCA TACTTCTTGA AGATCTAGCA 005760 005761 GTCTCTTTAA CAGTACCATC GCCTCTGAAG TCAGATGGTC ATCTCAGTTT TTTAAAGCCT GATATGTCGT CCAGTTCAAC 005840 005841 TCCTGAAGAA GTCATTAGTG CTCATTTTAG TGAAGATGCC TTACTTGAGG AAGAGGATGC ATCTGAGCAA GATATTCATT 005920 005921 TAGCTCTGGA GTCTGATAAT TCAAGCAGTA AATCAAGTTG TTCTTCTTCC TGGACAAGCC GATCTGTTGC TCCAGGCTTT 006000 006001 CAGTACCACC CTAATCTACC TATGCATGCC GTCATAATGG AAAAGTCCAA TGATCATTTC ATTGTGAAAA TACGACGTGC 006080 006081 AACACCATCT ACCTCTTCTG GCCTTAAACA GAGTATGATG CCTGATGAAT TATTGACATC TTTGCCCAGA CATGGAAAGG 006160 006161 AAGCTGATGA AGGACCAGAG AAAGAATATA TTTCATGTCA GAACACAGTT TTTAAATCTG TGGAGGAATT GGAAAACTCC 006240 006241 AACAAAAATG TTGATGGCAG CAAGTCAACT CATGAAGAAC AGAGCTCTAT GATACAAACA CAGGTTCCTG ATATATATGA 006320 006321 ATTTCTTAAA GATGCTTCAG ATAAGATGGG TCATAGTGAT GAAGTGGCTG ATGAATGTTT CAAATTGCAT CAAGTATGGG 006400 006401 AAACAAAAGT GCCTGAAAGC ATTGAAGAAT TGCCTTCAAT GGAAGAAATC TCACACTCTG TTGGGGAACA TCTTCCAAAC 006480 006481 ACATACGTAG ATCTAACGAA AGATCCAGTC ACTGAAACCA AAAACTTGGG GGAATTCATA GAAGTAACAG TTTTACATAT 006560 006561 TGATCAGTTG GGATGTTCTG GAGGCAATTT AAATCAGAGT GCTCAAATAT TAGACAATTC TTTGCAGGCT GATACTGTAG 006640 006641 GTGCTTTTAT TGATTTGACA CAAGATGCTT CAAGTGAGGC TAAAAGTGAA GGTAATCATC CTGCATTAGC TGTGGAAGAC 006720 006721 TTGGGATGTG GGGTGATACA GGTAGATGAA GATAATTGTA AGGAAGAAAA GGCACAAGTG GCAAACAGGC CTTTAAAATG 006800 006801 CATTGTTGAG GAAACCTATA TCGACTTGAC CACAGAATCT CCCAGTTCAT GTGAAGTAAA AAAAGATGAG TTAAAATCAG 006880 006881 AGCCAGGATC AAATTGTGAT AACTCGGAGT TGCCTGGGAC TTTGCATAAT TCTCACAAAA AGAGAAGAAA CATTTCTGAT 006960 006961 CTAAATCATC CTCATAAAAA ACAAAGAAAG GAAACAGACT TAACTAATAA GGAAAAGACC AAGAAACCTA CCCAAGATTC 007040 007041 TTGTGAGAAT ACTGAAGCTC ACCAAAAGAA AGCCAGTAAG AAGAAGGCCC CTCCTGTGAC TAAAGATCCC TCATCATTAA 007120 007121 AGGCAACCCC AGGGATTAAG GATTCATCAG CAGCACTTGC CACTTCTACA AGTCTTTCTG CAAAAAATGT TATTAAAAAG 007200 007201 AAGGGAGAAA TTATCATTTT ATGGACAAGA AATGATGACC GGGAAATTTT ATTGGAGTGT CAGAAAAGAG GGCCATCATT 007280 007281 TAAAACATTT GCATATTTAG CCGCCAAGTT GGATAAAAAT CCAAATCAGG TAACTACCCA ATTT

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