Lnc-HOXA13-1:1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID	lnc-HOXA13-1:1
Source	LNCipedia2.1
Same with	NONHSAT119708
Classification	intergenic
Length	4899 nt
Genomic location	chr7-:27226866..27232305
Exon number	2
Exons	27226866..27231685,27232227..27232305
Genome context
Sequence	000001 GCTCCGCGCC GCTGGGCTGT AGGCCCCGAA GCCGCCCGCA GCCCGAGGCC GGGACCCGGC GCACGGGACC GTGGCACCGC 000080 000081 CCTGTTGGAA AGGAGTCCCG GCAGCCACGG GTGGCCCAGG CCGTGTCCCC GTCCCAGAAG AGCGGGGTTT GCCCCAGTCC 000160 000161 AGCAGACTTC GGAGCCCGCT AAGGCCTAGC GGGGGCGAGA GGGAGCGCCT GCAAGCCCAG GGGAAAGGAC GTGGCTGGAT 000240 000241 CGGAGTTCTG GGTCCTGGTA GGAACATAGG GCCGACTTGG CAGGGAAGAG GATAGGGGAG CCAAGACCCT GCTGGAGAGA 000320 000321 CTCTCCTGGG GTCCCAGAAT CCAGGCCTCT CCCTCAGTGA GTGGCAAGCC TTTGGTGAGA CCCTTGATGC TCTTCTCCTG 000400 000401 CCTAAAATCC ACACAGATGT GAGGCGCACT CTTCCAAGGT AAAAACTCCT GACTCCCAGC CCCCAAGAAT CCTTCACTGC 000480 000481 GCTCTGCGAG GGAGAGAGCC CCTTACCCCC TGCCTATAGC CTGCCTCCAG CAGATCAGAG CATCAGGCCC TGCGGTAAAC 000560 000561 GTTAGCTTAA GCGTGATCTG CCGCTGAGCC TATCTCTCCA GGTGAACCAA AGAGGACATG CAAAGGATTT CTTTTCGCGG 000640 000641 AAGCCAAAAA TCTGGATTGT ACCCCTAGGG CTGCGTGGAT GGGCTGGGCT GGGCTGTGGG GGCATATATA GCAGAAACAA 000720 000721 TGATCTGTGA ATGGGTCCCA TCGCAGAACT GCCTGGAAGG GTGTGTAGGG GAGGAGGGCT GGATGGGGTG ATGGCTCTTC 000800 000801 TCAAGCCTGG AATGTGAGCC AACATGAGCA CTGAGTGGAA ATGGAGCTGC CCTAGGAAGC AGTTGGAGCT TTGTGGCGTG 000880 000881 GGGGCTTCCT GTGAGCTACG GCTGTAGAGA CCGAGACCCA AGGACCAGAG CCAACCTTCG GGTTGGGCCA CCCCCTTTTG 000960 000961 TCTTCTTTAT CTCAGACACA CTCTGCTGGG AAACCTGTTT GGGCCAAAGC TGCATGGGGA ATGGAAGGCA GACACTGAGA 001040 001041 ACTAGGGCTT CGCCCTTCAA AGTCTCCCCC ACCCCATTTG TTCCCATGCT ATAGGAAAAA GAAGTCTAAT AATTGGCAAC 001120 001121 AATAAAAATA AAAATAGTTA TTAAAGGAAG TAATCTTCTC TTCTCCCTTC AGTTTGGGAT CCACTAAAGT AAATGATAAC 001200 001201 TAGATTGCTT AGGTACTTGA GACCCTCAGC TGAGCCCTGT GCCCCACTCT GCAGTGGCCA GGGGAAGGGT ATGGGCCTTT 001280 001281 TCAGATATTT AGGGGCTTTG AAGGATGACT GAAACTGCCA GTCAGACCAA GCAGAATTAT GAGGTCCACT TCAGGGCATT 001360 001361 ACCTGTTTCT GAGCTTTTAG GAAGTGTTGG GGACCTTCGG GGAGGGTGAG GTGTCTCAAC AAAGGGACAA ATTAACCCCT 001440 001441 GCCTCCACCT GGTAGTGATA GAGGTGATCT CTTGATTTTT TAATTGAAGC TTCAGTGCTG CCTCTGGGCA GCGCCTGGAA 001520 001521 AATGTGATGG ATTGTCTATG ATCTGGCAAT AAGCCATGCC CTGAGAACAA ATACGTGGAG ATCTCCTGGG CCTTCCCAGA 001600 001601 CAACCCATCT CCCCTAGCTC ACCACATAAG ACAGATGTGC CCACAGGAAC CCTTTGATTT GGAAGGAGAT ATTCCTGTAA 001680 001681 TGGAGAAGAG CTCTGTTGCC ATTTCTACCC GGGGCCTCCG GGCCAGTTCT TGCACCTGTG TGCAGTATGG TCACCAGGGT 001760 001761 TGAAATACTC TTCTGTGTAG CTTTCTAGAA ACAGTGTGAC ATTTGTGGAC AGAGGAAAGT AAGGGATTAG GCAAGCAGGA 001840 001841 GGAGGCAAAA TAATGATGGT GCCCTAAGCA ATCCACCAAG AGAGAAACTT AACTGTAGCC ATCTGGGAGT GAGATTCAGT 001920 001921 CTGTCAAGTG GGTCCTGACC CCTCCCAGGC CTATCCCATC TGGGTTGCCC AGCCTAGAAA AGCAGCAGCT GGGTCCGCAG 002000 002001 AAGAGAAGGA GGAAGTGTTG GGGAAGAAAG GAGGGTAGAG AAGGGAGGGG AGAGGAAGGG AGATAAGCCA GACTTGGTGG 002080 002081 GGCCTTGAGG TGGAGTATTC CTAAGAAGGA GGTGGGAGAC TCAGTTCAGG CTCTGGTGGA AGCCCGAAGT TGGGGGAGAG 002160 002161 TCAGGGACCT AACAGCCCCT CTTCTCTGCG CCTGAGTATT GGATGCCCTC CAGTGGCACC TCAGCTGTTG CTCAGTCTAG 002240 002241 CAGAGGCATC AAAAGAGGTA GGGAAGAGAC AGGAGGTCCC AGCAGGTGAG AATGGCTGGA AGGAGGCAGG GCAGGAGACA 002320 002321 GGAACTGTAG GGGGGACAGG AGCAGGATCA GGAACTGTAG AGGGACAGGA CCCCCTTGAG AAGGACAGTG GTGACTGGGG 002400 002401 CAGCTTGGCA TTGACATTGA GACTGTGGAC AAATGCTGGG CATTTAAAGG GCTGCATGTG CAAGTACTGG GGACTTCGAA 002480 002481 TTCTCAGATT TCTGGGACAA GGAGCAGCTG CTGCCTCCCA AGCCAGCCCC AGGGAGAGAA GAGGGTGGCC CAGCAGCTTT 002560 002561 GCCAGTTGGA GCTGGGAAGC CTGGAGTGTG GAGGTGCTCC CGGCCACCCA GCTGTATCCT CCCTTGGAGT GAGAGGGTGT 002640 002641 TAAGCCGCCT GTCAAGTGAC GATCCTTGCA GCTCACGTCC CTTGAATGAC TGTGCTGGAA ACGCCCCCAG CACAACAACC 002720 002721 TCGGTAACAA GGCCTCGCAT TGCCCGGTGC TCACCGACGG CCTCGAGGCG ACCCCGCCTG GGCACTGCCC GCCGGCGCCC 002800 002801 TCCCGCTGCC TCCCGGACCA TTCAGGCTGC AAGAAGAAGC GGAGGCGGCA GAGGCGCCTG GACCCACTTT ATTCCGATAT 002880 002881 TCCGCCTGCA AAGGCTGTGG AAAGAAGCGT AAGGCTCAGG GATGGTAGTC CCCAGAGAGG AGGGTCCCTG AGGCTCTGCG 002960 002961 CAAGCCCCCC CTCCCCAACC TTTCGGGCCA AGTCAGACGA AGCCTCGGAA AGGCTGGGTC TGTTTTGCTG ACCAAATCTC 003040 003041 CTTGTTAGCC GTTTCCGCCT GACAAGCCTG GCGCAGGCGT TGGCCTTCTC CTCTCCGGGC GGCCACCTCC AATGCCGCGC 003120 003121 GGGGAGCAAT GGGGCCCGGC CCTGCAGAGG GCTGCCTGGA CCTTGAAGTT TGGAAAAACA AGAAGAGACT GAGCCGGCTC 003200 003201 CCTCCCTTCT CTGCAGACAC ACACGCACCG TCAGGCCGCC GCCACTTCCT GCCTTTGTTT TTCTTCCTCC AAACATTTTT 003280 003281 TGGCCTCTTG CATTAGCCGC GGTGGGGCTC TGGGTTGACG ATAAAAGGAA ATACACTCTG AAGACAGTTT TCTGGAGATG 003360 003361 GCCCGCGCTG TGGAGCTCCT GAGAAAGAAC AGCTCCTGGG AAGCCAGTCG CCAGGGCCAA TGTCACAGCC TTACGCGCGC 003440 003441 CGGCCTCTTC AAGAAATGGA ACTCGGACTT GGCCTTCCGG GGCGGCTTTA GCCTCAGTCG GGTCTTTCCC AGAGCCCGGT 003520 003521 GGGCTAAGCT CGGCTGTTGG ACCTCCTGCA AAGCGGAAGA GTCAATCATA GGCTCAGAGC AAAGTCAAAA CCAAGGACCC 003600 003601 GAAGGTCTGC CTCCCCTTTT TCCCCTAGAT TTGGTCTGAT CCTCAGAGCT GCGCCCACCC CTCGCCCCAG CCGCCTGCCT 003680 003681 GGAGAAACCT TCACATTCAC ACCGCCAGCA TATTCCGAAC ACGAGGGCAG GAGCGGGCAA AGCTGGGATA TTGCGCAGCC 003760 003761 TTGGGGAGCT GAGTACCCGT CTCCTATTCC TGCTGGGCAA CTAAAAGTGT TCGGCCACTC CAGGCGTTTT CCCTTCTGCT 003840 003841 GATATCAAAA ACCTTTTCCC TCATCCATCT TCACGGCAGC GCCCCCACAC ACCCCCTTCC GGGCGGCAAG TCCCTCCGGG 003920 003921 CACTCGGCTT CGGTGCAGCC TGCCGAATTG CCCTGCCAGC CGCTCCCGGA GCGCCTTTCT CAGCCCCAGC CTTTTCTCCG 004000 004001 GAATTCGCCT TTGTCTCCTG CGGACACCCG TGGGATCCAG CCCTGCCAGC ACCCTCTCGG TTCGGCCCTC GAGGAGGACA 004080 004081 TGGGAGGCAG TGGTTATGCG GAACAGCGCA CACCCCCATA CCGACCTTTC TGCCGGGACC GCTCTCCCGG ACACCAGGGG 004160 004161 AAAACCGATC TAATTAAGAG AGGGGCTGCG TGCCGCTGGG GGAGGTGGCC TGGCATCCCC CGCTGGCGGG CCACCACAAC 004240 004241 CCCGTCTGCT CAGGCACAAG CTGAAGTTGA CTGCCAAAAC TGCTATAAAA CCGCAGGTCT GTCTAGAACT GTTTTCGGTT 004320 004321 TTCCTAGACG CCCCCGGGTT CAATTATGGT CTTAAAAGCC CTAATACAAG TGCAAGAATT TGTTTGCCTT CACCCAGGGG 004400 004401 CGGGGCGAGC CCCGCAATGG TGGCGCCTTT GTTATGGCAA AGTCACTGAA ACCCTTCATG CATTCCTTTT GTTCGAAGGT 004480 004481 AGGGGTGGCG TGGACTGGGT GGGCTGCAGA GAGAGAGCTT GGGATAGCCA AAATCAAGCC AGGGAACAGC TCGAATACCG 004560 004561 CTGTTTGAAA CCTCTCCTTC TGTCTTTTAT ATTCTGTCTC TAAAAAAGAG ATGCTGTGGA GAAACAAACA TTTTGCCTTG 004640 004641 TTGGTCACTG CTGGAAATAG AAGTTTTTTC GCTGCAGGGC AATTCTGTAA ATGTGCTTCC CAGCTTTAGG AGGTCTGAGG 004720 004721 CTACTCTTCT CCAATAACCT TCCTTCCCAC TGGACCTTCT CACTCACAGC ACTGCTGCCC TCTGGACAAG CCACAGTGGA 004800 004801 CAAATATGTC AAGCTGAAGA TGCACAAATA ATTTCAAGTT CAGTTCTCAG GGATTCAAAG GACATGAAAA TTCTTGTAGC 004880 004881 AAATCTTGAA TAAAGAGTT

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