Lnc-HPCAL1-1:7

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID	lnc-HPCAL1-1:7
Source	LNCipedia2.1
Same with	NONHSAT069112
Classification	intergenic
Length	3493 nt
Genomic location	chr2+:10589731..10597755
Exon number	4
Exons	10589731..10590781,10592407..10592595,10594139..10594184,10595549..10597755
Genome context
Sequence	000001 GCTGCCCCCA ACTTGCTGTG TGCTCTTGGA CAAGTTATCT CCCTTCTCTG GGCTTCAGAT AACCCAAGGA TCCTTACATA 000080 000081 TCTTTATAGC TACAAAGCCC TGTGAGGTTT TGAAAAACTT CCTTGGTACC CAAAACCAGG TCTGAGGCAC AGTCAGTGAA 000160 000161 TACCTGTTTA ATGAATGCAT GCATAAATGA ATGAATGGAT GATCCAGCTC TTCCTGGAGC AGGCACGACT TCCACAGAAA 000240 000241 CAGAGCAAAC GCTAGCCGTA AGCAGAAGTG AGTCTTCTTC CTATGTGAAG GGATGTGGGG GTGGTACGCC CCTATCAACT 000320 000321 TTATCTTTAC ATAGTCCTTG AGCGCCCACC GGGCACCGTG TTCCCCGGAC TAGAGGGAGG GAGAGGGGGG TTAGCTCCAC 000400 000401 CCTTAACAAG CTTAATTCTT GATGAGATTA ACCATCAAAA CCCATCAGAG AACGTTATAG CTCCAGCGCT GAATGAGACA 000480 000481 TCTTTGATTC TGTGGTGATG CGGACTTTGT GCCTCTCTGT GAGGAATCAC TTTGTTCCAA TGACGCAATT TTCCTCACAC 000560 000561 TCCGGAAGTG TCCTGCACTG CCAGAATCGC CCAGCTTCCC GGCACACCTA TCAACCAGTC GTTCCCAGCA CTGCCCAGTA 000640 000641 TGCAGCCTCC AGGCAGAGGG CCTGGATGTC TTGGCAGGTA GGGTTCCCCT AGCAGCCTGG GGGTGGTCAG ATAGAAACAT 000720 000721 TAACTGGAAC GTAGAGGCCA GTTCTTGGCT CAGGGAGCCA GGAGGGCTCT GACTGTTGCA CATACAAGCC ACTCACACTG 000800 000801 CTATCGCCCA CATACCTTCC TCTCCCGCCA GCCCACCCCA AAGCCCAAAC TCCTGCCCGC ATGCTGGGAA GGTGAGCCCT 000880 000881 TGCCTGGAGA GCCCAGCAGG GGAAATAGAA GGAGGGAAGG AGGCCTGCTC CTTCCCCGGA GCTCTGCTCT GCGGCTGCAG 000960 000961 GAAGACCCGC AGAGGCCCTG GGCAGCAGAA CTGTGGACAG CAAGGCTGGA GTTGTGAAAC CCAACCACTC AGCTGGATTC 001040 001041 CAGAAGCTCA GGTGTTTCCG AAAAATCCAA TCCACCCTCC AAGGTGGAAA GTGTGCCATC TCTGCCCATA ATCCAAATGG 001120 001121 CGTGCCTGAG GCATAGAAAG CAGCTTTCAG GGAGGCCTTC CTTCCTCTGA GCAATGGTGG CATCATCAGA AAAGTGGAGC 001200 001201 TCCTCCAAAA GGATCTGCTG GAAGCAGAGG ACGCCCATGT GGAGCAGCAT GCGGAGGGCC CTTGCACAAC CTGGGTCTTC 001280 001281 AGGAAGTTCC TTGCCCAGGT GTTGGCCCAG CTCTCTTCAT GGTTCCAAGA AGGCTGCCCC AGGAAGGCTT GTGGACAGAG 001360 001361 GGAGAAGCAT CTCTTCCTCT ATGTCTCTTT TTATCTAAGA AACCAGTTTG ACCAGCATCC TTCCCCTCGG CTCCCCAGGA 001440 001441 GGAATGCACG GATCCCTTCG CCTTCCCCCA TCCCTCCATG GTTGACTAAA CCCACTAGGA TCCACTCTTT TGCGTGGAAA 001520 001521 TGGGTTCAGG CCTCCCACGA AGAGCATGAA GATGCCCTCT GTTATGGGTT ACATTATGTC CCCTGCCCCC GAGACCGTAT 001600 001601 GTTGAGTCCT AACCCTAGTA TTGCAGAACG TGAATTTATT AGGAGATAGG GTCTTTATGG AGGTCATTAA GTTAAATGAG 001680 001681 GGTGTTAGGG TGGGCTGGTG TCCTGATATA AAGGGGAAAT TTGGGGCTGG GTGTAGTGGC TCACACATAT AATCCCAGTG 001760 001761 CCTCGAGAGG CCAAGGCAGG AGGATTGCTT GAGGGCAGGA GTTCAAGACC AGCTTGGGTA ACATAGGGAG ACCGGTATCT 001840 001841 ATAAAAAAAA TTAAAAACAA AAAAATTAGC CGAGTGTGGT GGTGCATGCC TGTAGTCCCA GCTACTCAGG AGGCTGAGGT 001920 001921 GGGAGGATCG CTTGAGTCCA GGAATTTGAG GCTGCAGTGA GCCATAAAAA GATGGGGGAC GATGGAGACG CACAGGGAAA 002000 002001 ACACCTTGTG AATGCGGCAG AGATAAGGGT GATGCCTCTA CACACCGAGG AACTTCAGAG ACAACCAGTA AGTCACTGGG 002080 002081 AGCTCGGGGA AGGCACAGCG CAGATGCTCG CTGCCCTCAG AGGGAAGCCA GCCCGCCAAC CCCTTGATCT CAGACCTCTG 002160 002161 GCCCCTGGAA CTGTGAGATG ATAGATTTCT GTCGTTTAAG CACAGTGGTG CTGTGTTATA GCAGCCCTAG GGAACCATCC 002240 002241 ACTATCAGAA CAAAAGCAGG GCTGGACTGC TAGAAGAAAG GAGAGGAGAA TGGCAGAGGA TACCCACCTT GGGGCTGAAT 002320 002321 CTGAGATCAC TCCAGGGCTC CCCAGGTTGT TTTGAAGAAT GGAGATGGAT TTGTGCAGGG CTCACTGTAG AAGCTCAGTG 002400 002401 CAGCATGCGA CGCTTATAAG GCTGCAATCC CCAGAGCTCA GTCCCTGAAG AGCGCTGCAT TCACAGACAT CAGCCAGCAG 002480 002481 ACAAACCAGT ACCTATTGTC CCTGACCCCC AGAATCCAGC AGACATATAA AAGATGGTTG TTAACCCCAC TAAGTTTTGG 002560 002561 GGTAATTTGT TATGCAGCCA TGCAACTGAA AGAAGCAGCT ACAATATTTT TATAATGAAA TTCTTAGCCA GGACCCTCAT 002640 002641 AGCCTAGCAA GAAGTTCTGT CTGGAAGAGC CCAGCTTTGG GGTTGGGTAT GTCTGGGTTT TAATATGTCA AGAGGGCAGG 002720 002721 CCCTGGAGAC GGAGCACATG GATTTGAATC CCAGCCTCTC ATAGGCAGGT TAATTAATTT CCCTGAATCT CAGTTTCTTC 002800 002801 ATCTCTCAAT GGAGAAAATA ATAGAAGCCA CCTCACGGGA ATTAAATGAG ATTATTTACG CACAGCACCA AGGCTGTGGC 002880 002881 TACTGTATTT GACCCCTGAA ACAGTTAATT TTTCTTGACA TCCCTTCCTT GGTATATGTA TTAGTCAGGG TTCTCTAGAG 002960 002961 GGACAGAACT AATAGGATAT CTCTCTCTCT ATAGATTTAT ATAAAGGGGA GTTTATTAAG TATTAACTTA CACAATCACA 003040 003041 AGGTCCTGCA ATAGGTCGTC TGCAGGCTGA GGAGCAAGGA GAGCCAGTTC AAGTCCCAAA ACTGAAGAAC TTGGAGTCTG 003120 003121 ATGTTCGAGT CCAGGAAGCA TCCAGCACAG GAGAAAGATG GAAGCTGGGA GGCCAGGCCT GACTCTCCTT TTCATGTTTT 003200 003201 TCTGCCTGCT TTATATCCGC TGGCAGCTGA TTAGGTGGTG CCCACCAGAT TAAGGGTGGA TCTGCCTTCC CCAGCCCACT 003280 003281 GACTCAAATG TTAATCTCTT TTGGCAACAC CCTCACAGAC ACACCCAGGA TCAATACTGT CAGTTCAATC AAGTTGACAC 003360 003361 TCAGTATGAA CCATCGCAAT ACAATAGGAT TACTTTCTGT GATAACCTGT GTAAAAATAG GCAGTCATGA TTTTCCTGTT 003440 003441 GTGTTCTTCA GGTGTAAAAC AAAAAATTTT AAAAGAAGAA ACTTCAATTT TAA

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