Lnc-ITPR3-1:9

Same as ENST00000530000.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID	ENST00000530000.1
Source	Gencode19
Same with	lnc-ITPR3-1:9
Classification	intergenic
Length	6593 nt
Genomic location	chr6+:33878879..33885985
Exon number	2
Exons	33878879..33881988,33882503..33885985
Genome context
Sequence	000001 CACAGGCTTT GGAGGCACAC AGAGGACCAC AGAGGCAGAG CCTCATTTCC CGCTGGATCG TCCTCTGCCC GGTGCTAGGG 000080 000081 ATTCCATGGT GTCATTCAAG AGTGCTGCGA CATTTTTTAT TCTTTGGTAT CTAGGAATCT GCGACTTCCC ACTTTTCTTT 000160 000161 CTCATTCTCT GTCCACTCTT TAAGGCCTGG CTGGAGCCCT TCCCCTTCAC GAAACCCCTT TTGTCCACTC CAGCCCACAC 000240 000241 AGTCTCCCCA GTCCACTTTT TTTGCAGCCC AGATTCATTT AGCCTTTATT ATGCTCAGTT TAGGCGTCAC TCTGTTTTAC 000320 000321 TCTCTAAGAG TTCCCTAGGC ATTCTTTTTC TTTCTAGCAA GATGATAAAC TTCTTGAGGA CAAGACGTTC TGCCCCACCA 000400 000401 CCCCCCTCCT GACCTGGGGG GATAAATGAA GGGTTTTGGT AGCAATCAGG GAAGCTGGCC TACATGCTAC CTGCCTGCGT 000480 000481 ATGTAATGGT GGCTGATGGT TCAATATTAA TGGATACTGA ATAAGCCTGG CACCTGCTGG AGACAGCGAT GACATTTGCT 000560 000561 CTCACAGCAG ATGACAGGGT GATTGATGGC AGGCATCTCT GGGTGGAAGC GATGAGTTCT CCAGGGGCGA TGAAGGGGTT 000640 000641 AGACTGGGTG CTTAGGGCCC TCAAGGGACC TCAAGGGAAT GTAGAGAAGC CTCAGGCAAC CCAGGGTCAG GGGTGAGGGG 000720 000721 ACCAGGAAGA GAAAGTCCGC TCAGGAAGGG TGTAGGCTCG GACACTGTAG GAGGCAGATC CAAGAGGCTT CCTAAGTCAG 000800 000801 ACCTCTTGTC TAAATTGGAT GGGCTGAGAG CTTTGGAGTC ACTGCTTTGC ATACGAGACC ATGGGGACAT AGAATCCGTC 000880 000881 ATTATCCCTG CCAGCTCAGC TCAGAGGTCA GAACTGAGGA GGGAAGTGGT CAGGTTTAGG GTACAGGGAG AGAAGGTAGG 000960 000961 ACGTCCCCTC CAGGGCCTAG AGCTGGGGAC CACAGCCAGG CTCTGGCATG CCTGAAAACA GGGCACATCG CAGGTGGTCG 001040 001041 GTAAAGACAC GTGGGATTGA ACTGAACAAT GAGGGATTAA TAGATTCTTC TTAAAATTGT CTTATGGTTT AAGGAGGGAA 001120 001121 CAGAACAGAG TTGGAAGTAG GGGACAGGAA CTCAGATGTG ATTTTAGCCA GGGCTTGGTT TAAGCTGTTG TGCTTCTTCT 001200 001201 CTTGTGATAC TAGTTTGAGC CAAGGGCAGC AGGGGCTGCT CCTGGTGAGA GGACGTGGGC AGGGATCCCA TCAGAGACAA 001280 001281 GCCAGGCAGA CACTGTCCAG AGAGGCCTCT CAGGAGGCCA GGACAGCCAG CTGCTTCTCC TTAAGGAGGA GGCCTCTGCT 001360 001361 CCACCCTCCA TTCCTCCTCC CCTGGGCCTC TCTCCCTTTC TCCCTGTGAG ATCTTCTGCT ACTCCAGCCA CAGGAGGTAT 001440 001441 AGATCCATTC CCAGAACAAA AACTGTCTGG CTGCTCCTGA AACACTTTTT CTCCTATGCA CTACTGGCTC ATCCTCATGC 001520 001521 CTCCAGCTCA GCTTAGACAT CCCCCTTGAA AAGGTCTTCT CTGAGTTCCT GTGGCTCCTG GGCCCATGCC CAAGGCTGCC 001600 001601 CTGTCACACT GGTCCCCGTA TTTTCTTCAC AGCACTTATC ATTGTCTGAA TTTATCTCAT CCACCTCTTC TCTTTGTTGG 001680 001681 GTATCTCTCT TGCTTCCTTA GAAGGGAAGC TCCATGCAGG GTTGTGGTCA TTCTCGACCA TGTTGTGCCC CAGCTTCTAG 001760 001761 AACAGGGCCC ACATAGACAG TGGCCAGTGA GTATTTGTTG AATGGATGAG TGGGTGGATG ACAGCACTTG GGAAGGCACC 001840 001841 AAGTCTCAAG TGGGGTGGGA TTGGGGTGGG GTCCTAGCAA ACCTCCTTGT CTCTCATCCA GGACAGAATA GAGCTGTCCT 001920 001921 GTGGGGGAGC TGCTCACTGG GGAGAGGGCC TGTTGGGCCC TGGTAGAAAA TCCATTCTGG GCCTGGGCCG GCCACTGCTT 002000 002001 GCCCCCTGAC AGATGGTATG CTAAGCAATC TGTGAAATGG GATGCAACAC AAGTTTCATT TGAGCCTGAA CCCCCAGAGG 002080 002081 CAGGGAGAAG AAGAACCAAA AATGTGTAGT CCTGCTCCCC TACCCAGGCA CAGGCCTGGT GCCCTCGAGG GCCAGACAGT 002160 002161 GCAGAGGGGA CTCTGAGGGT GGGGGAGAGA GAGGCGTGGT CCCCGGCCTC TGATGGAGTG GGAAGTGTGG TGCTGTGCAC 002240 002241 AGTGAACCTA TGGGGTTTAC TAGACAGTGG CCTGTCTAGC AATGGGCAGC AGGGAGAGAG CAGGGTTTCC AGACAGGCCT 002320 002321 TTAGTTAGGT GCCCAGGCAC AGGCAGGGCT GTCACACCTG TCTGCCCCGG CCCCCGAGCA TTTTGGGGAT TTTGGATGGT 002400 002401 GGCTCACCCT GACCTCTTTC CAGCTTTAGC ACGAGAGTCC CAGCCCCATT TTCTTTCCTA GCTAACTGTA CCATCACTGC 002480 002481 CACATCAGGG CCCCCAATAC AATAAGGAGT TAAAGGAAAA GAGGCTACCT TGAGATCCCC CTCTACCCGC CAGCCCACAG 002560 002561 GGTTCCCCCA CCTCAGAGTT CAGGAAGTAT TGGTAAATGG AGGCAGGAGT GGGGCAGGGA TCCTCGGGGG AAGATCTTAA 002640 002641 GAACTTCACC ATGGAATTAG CTGATGACAC TGGTGTCTTT CTTCTAAGGG GTGCCTATCC TTTTTCTATG CTTGCTAGGG 002720 002721 AGCTTGAATC TTTTCTTTTT AAGAGAGAAA ATTTCTGGGC TTGGGAAAGA GGAGCCTCAA GCTGACACTG GTCTGAGTGG 002800 002801 GAAAATTTGG GGCTGAAGTC CTTCCCTTGA AAATGTGTCT GCTGGGCAAT GCTGAGCAAA ATTCCACAAA GGAGAGAAAG 002880 002881 GGTGGAGGAG GGCAGATTGC CCTTCACCTA CCTCTGCGTC TTCTTTGCCT GCCCAGCCTT AGCTGGGCCC CACACCACTA 002960 002961 ATGGAATTTC CATCCTCATC CCATAGCATC CCCAAAGAAC ATTCAAGTCT GAGCCTCAAG GAGCCTCTGC GACTCGGTGT 003040 003041 CTAGATCCAG GAAATGGAGA ATGAGCCGTG ACTTTGGATG CTTCACTCTT GTCCATCAGG CTCGGAATTG GGTAGCCCGG 003120 003121 CTCTGCAGGG ACAGTCACGG AGCTGAAAAA CTGCTGCCTA ATGAAGCTGT TTTCTTCTAC CACCGGCTCA CCCTCAAATT 003200 003201 ATTTCCTGAG CGAACTCAAG AACCTTCCTG GGCTAAGCCC CAATTTTGGG GCTCGCCTGC CCCTGCATCA CAGCTTCCTC 003280 003281 TTCTGTTCAC AGCTGCAACC GCCTACTCAA CCTTCTGCGG TTCCTCTCCC TGCCCCTCCA CAGTGGCTGC TGATGGGAGC 003360 003361 TCTGGCTCCC TGCGTTTTCA CTATCTCCCA GTCAAATGCA GAGTCCCTGT GCAATTTAAA TGCTTCTCAG CTAAGAACAG 003440 003441 AGAAGGGGAT AGCATAAGGA TATTCAAAAG ATTCAAGAAA TCTCAAAAGT GATCACAAAA CATTTGTCTC TGACCAACCA 003520 003521 GAAACATCGA CGGGTGAGAA GGGCATTTCC TCTAGCTGAA TTCTTCATGG GTCTTCAGGC TCTGTTTTCA CTTTGGATTT 003600 003601 TCTGGAGTCT CCTGAAGGTT ACCTGAAATC TTGTTGGTCC TGAATATTGT ATGTGGAGTC CCAAGCTGCA AGAAGTCAGT 003680 003681 GGGGCTGGAC GGGAGCCAAA ATCAGAGACT CAAGCAGCAC AGCTGGGCCC CATTGAAAGT GAGACCAGCT GTCCCAGTTG 003760 003761 GAAGCTGGGG TATAGAGCTG GGGATGGGTG GAGGCAGTGA CAGGCTCCAT GTATTGGTCA TTCAGACTCC CCAGTAGCCT 003840 003841 CAGGACCCAA CTCCCACAGG TCAGAGAAGA CCTGGTGGAG GGCCTTATGC AAACCTCAGT GGGTGATGCA GGAGGGAGTT 003920 003921 TTCTGAGCAG GAATGCCAAC AAAAAAGGCC TTCAAAGGAA GGCCCTGCTT GGGACAATCC TGCCTCTTTA TGGTCTGGTT 004000 004001 CACAGGTTCC CCTGGGTGGG GTAATGGAAT CCAAGCTAAG GTGTCTGACT TCAAAAGTTT TCAGAAATGC CACTTTTGTA 004080 004081 AGCATCAGGG ATTGGGTTTT CTGAGATGCA AAACATCTTT GTTAAGGGGT TAAAGCATCC TTAAGCTGTT TAGGTTTCTG 004160 004161 GGGATACATA GACTTAGGAA GTTAGAGCAG GTGAAGTTGA GGGGGATGGG AACTAAGAAT TAGCTCAAAA TAGTCACCAA 004240 004241 TGCAGAAACC CAGGCACTTG GGACCCTGAC AGTGGGGAAG GCAGAGGAGT AACTGTGGGG ACTTGGGCAC CCTATTAGCA 004320 004321 GAATGGGGTA ACAGAGAAGG CAAGAATTGC TTCCCAGGAG ACTGGGCTGG GAACAGGAAG GGGACTAAAA TGCTGTCCCT 004400 004401 GGCTGAAGAG TGTGGAGGTA TAGAGGAGCT GGTAGCAGGG CTCTGAATCC ATACACGAGA GCAAGGACCA GTGGTTTCAG 004480 004481 GGTGGGATAG GGCTTTGATG TCTTCATGGA CTTAGGGTAA TATTCACCAC CATGGTGAAT TCCACAAAGG AGAATTCACA 004560 004561 CAAAGGTCTC GGACCAGCCA GTTTCCATGT GAAAAAGCCA TCTGGGAGCA AGGGAACAAA CCCAGGAATA CAACTGTATT 004640 004641 GGGGGAAATT CAGCCAGACA TAGGGCAAAA TTCACCCCCA ATATTTCATG TAGGTTCTTT TCTATTTTCC GTAAGTGTCG 004720 004721 GCCGGTCTGA GAAATAAAGG GACAGAGCTC AAAAGAGAGA AATTTTAAAG CTGGGTGTCT GGGGGAGACA TCACATGTCG 004800 004801 GCAGGTTCCG TGATGCCCCC CGAGCCGTAA AACCAGCAAG TTTTTATTCG TGATTTTCAA AAGGGGAGGG GGAGTGTATG 004880 004881 AATAGGGTGT GGGTCACAGA GATCACATGC TTCACAAGAT AATAAGATAT CACAAGGCAA ATGGAGGCAG GGCGAGATCA 004960 004961 CAGGACCACA GGACCGGGGC AAAATTAAAA TTGCTAATGA AGTTTCGGGC ATGCATTTTC ATTGATAACA TCTTATCAGG 005040 005041 AGACAGGGTC TGAGAGCAGA CAACCGGTCT GACCAAAATT TATTAGGCGG GAATTTCCTC GTCCTAATAA GCCTGGGAGC 005120 005121 GCTATGGGAG ACTGGGGCTT ATTTCATCCC TACAGCTTTG ACCATAAAAG ACGGCCGCCC CCCGAAGCGG CCATTTCGGA 005200 005201 GGCCTACCCT CAGGGACACA TTCTCTTTCT CAGGGATGTT CCTTGCTGAG AAAAAAAATT TAGCGATATT TCTCCCATTT 005280 005281 GTTTTTGAAA GAAGAAAAAT ATGGCTCTGT TCTGCCTGGC TCACCGGCAG TCAGAGTTTA AGGTTATCTC TCTTGCTCCC 005360 005361 TGAACATTGC TGTTATCCTG TTCTTTTTTC AAGGTGCCCA GATTTCATAT TGTTCAAACA CACATGCTCT ACAAACAATT 005440 005441 TGTGCAGTTA ACGCAATCAT CACAGGGTCC TGAGGCGACA TACATCCTCC TCATTTTACA AAGATGATGG GATTAAGAGA 005520 005521 TTAAAGACAG GCATAGGAAA TCACAAGGGT ATTGATTGGG GAAGTGATAA GTGTCCATGA AATCTTCACA ATTTATGTTC 005600 005601 AGAGATTGCA GTAAAGACAG GCGTAAGAAA TTATAAAAGT ATTAATTTGG GGAACTAATA AATGTCCATG AAATCTTCAC 005680 005681 AATCCACAAT TATTCTGCCA TGGCTTCAGC CGGTCCCTCC ATTTGGGGTT CCTGACTTCC CGCAACACAA GTGGAGAGAG 005760 005761 AGGTGGCCTG ACATTATGGC TAAGTTGATA TGGAAGCATT CTGGTTTGTT CTAGAAAAAA TGAAAGAGGT GGTGCAGGTA 005840 005841 ATCATCAGCT CCTGGTTCTG TAGCAAGGCT TTTGCTGCAA TCCCAGGAGG TAGCAACCTA GGCTTTGGTT CTGAAAGAAG 005920 005921 AGGGTCTACC TTCCTGAATC ATTTTTAGGA GTCTGCTGAT GGCCAGGCTT GGTGAGTTGG ACTCTGTAAG GAATTTTTAT 006000 006001 TTAAGTGAGG TCTGGGTAGG AAAAGAGAAG GGAAAAACTT GACCCTGCCT GCACCAAAGG ATTCTGGGAA GGAGAATAAA 006080 006081 GAGAAAAACC CTTCTTCATG TTTCTGCTTC AGAGCAGGAG AACCATCACA AGCTAAGTAA AGTCAATGAA GGGCGAGTGG 006160 006161 CCCTATGGCC ACCTGGGCAC ACACCTGCCC CTTGGCCACC TTGCATAGGC AGGCTGAGGA GGTCACTAAG GCTTGGTTTT 006240 006241 CCTGACCTGC CCTGATTCCA CATGCTGTAA GGAGGACCCA GAAGGCTGTG TGGCTACAGA GGTGCCCAGC ATGGTGGGGG 006320 006321 TCACTTCAGT GTGGACACTA GACTGGACCG CGTGGAACTA CAACCAGCTC AGAGCGCCAG CCAGAGTGCT GTTCTGGCCA 006400 006401 GAAGGAGGAG CCAAGACCCA CACCCAGGAG GACAATGAGC CCCTCTCTGC AGACAGGAGC CAGCCACACC TGGGGTCTGG 006480 006481 GGAGACTCTT CCTGATTCCA AATGGGACTG AACTTTAAAC CAGACTGGGC ATTTGAGCAA TTTTTTAAAA GCTGTCAACC 006560 006561 AAATAAAGGA ATGCCATTTT CTTTACCCAG TCA

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