Lnc-PTPN20B-1:1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID	lnc-PTPN20B-1:1
Source	LNCipedia2.1
Same with	,
Classification	intergenic
Length	4074 nt
Genomic location	chr10-:48927373..48950972
Exon number	8
Exons	48927373..48930366,48941194..48941333,48942569..48942690,48943409..48943556,48944447..48944635,48948321..48948400,48949676..48949865,48950762..48950972
Genome context
Sequence	000001 AGGTTAGAGT TACTTGTTAT TGGTAAATAG CCACTATGGA GACTAAGGAC CAGAAGAAAC ACAGAAAGAA AAACAGTGGA 000080 000081 CCCAAAGCTG CAAAGAAAAA GAAGTGGCAT CTGCAGGATC TCCAGCTAGG AGACGAAGAA AATGCCCAGA AGAGAAATGC 000160 000161 CAATGCTTTT GCAGTTCAGT CTGCTGTGTG GATGTCTCGA TCCTTTCACA GGACTCTGGA TTTGAAGACA CAAAAGCATC 000240 000241 ATATTCCAGT GGTTGATGGA ACTCCACTAG AGCCGCCACC AATAGCGGTA GTGGTGACGG GGCCTCCAAA GTTGGAAAGA 000320 000321 GCACTTTGAT ATAATGCCTC ATTCGGAACT TCACCTGGCA GAAGTTCACC GAGATCAGAG GCCCTGTGAC GATCGTGTCA 000400 000401 GGTAAAAAGC GCAGACTCAC CATTATTGAA TGTGGGTGTG ACATTAACAT GATGATTGAT CTGGCTAAAG TAGCAGATCT 000480 000481 GGTACTGATG CTTATAGATG CCAGCTTTGG GTTTGAAATG GAAATGTTTG AGTTTCTAAA CATCTGTCAA GCACATGGCT 000560 000561 TTCCTAAAAT TCTGGGAGTT CTCACCCACC TCGACTCCTT CAAGCATAAC AAGCAACTGA AGAAGACAAA GAAGTGATTA 000640 000641 AAACACAGGT TCTGGACAGA AGTTTACCAG GTTGCCAAAC TGTTCTACCT TTCTGGAATG GTGCATGGAG AATATCAAAA 000720 000721 CCAAGAAATC CACAATCTGG GCCATTTTAT TACAGTTATG AAGTTTAGGC CTCTCATGGC AAACTTTTCA CCCTTATATC 000800 000801 CTGGCAGACA GTTAAAAGGA TGGAAGATTT GACAAACCCG GAGGATATCC AAACAAACAT CAAATGTGAC CTGCAGGTGT 000880 000881 CACTTTATGG TTATTTAAGA GGAGCACACT TGAAAAATAA AAGCCAAATT CACATGCCAG GACAAGGTGG GGCTCACCCA 000960 000961 TGAGCTGGTC CAGAGTCTCA TCTCCACCTA CTCCACCATT GATGCCAAGA TGGCTTCAAG TCGAGTGATG CTGCTTTCCA 001040 001041 ATTCCAAACC ACTTGGGTCA GAGGCTATAG ATAATCAAGG GTGAGTGGTG TCATTGAGCA AACACAAAGT CGGGCTCATC 001120 001121 CAAGGATGAG ATTTTGCCAG AGAAAGGACG AGCAGCAAGT CAGGGAGCTT AAGGTAATTA TGAGAAAGTG ACTATCTAAA 001200 001201 ATTGCTTAGG TAGAAGGAGA CAGATTGGAT TTTTGTGTGT TTGGTATTTG GGATAAGAGG GATGTGGGTG TGTACTTGAC 001280 001281 ATGGGTTGTT TATTCTCGCT CTCTCTCTTT TTTTTTTTTT TGAGAGGGAG TCTCACTCTG TCACCCAGGC TGGAGTGCTG 001360 001361 TGGCACAGTC TTGGCTCACT GCAACCTCTG CCTCCCGAGT TCAAGGGATT CTCCTGCCTC AGCCTCCCGA GTAGCTGGGA 001440 001441 TTACAGGTGC CTGCCACCAT GCCCGGCTAA TTTTTGTGAT TATTTTTTTT AGTGGAGACG AGGTTTCACT ATGTAAGTGA 001520 001521 AGCTGGTCTC GAACTCCTGA CCTCAGATGA TCCACCCGCC TCAGCCTCCC AAAGTGCTGG GATTACAGGT GTGAGCCACC 001600 001601 GCGCCTGGCC TGTTTATTCT CTTAAGAGAG AAAATGAGGG GATTAATGGA CTGTAGTTCT GGACAAGGTG GAAAACTCTT 001680 001681 AAAGTGGAAG TATTGGGGCG AATGCTCTGA CAGGCTAGGA TGGTGCAGTC AGTCCCTTCA CCCAGAAATC AGTAGAATGT 001760 001761 TAGCAGTTCA GACTCAAACC TTGTGAAAAA CAGGTGGTGG AAAGGAAATC CCTCACAGCA ACTGGCACCA TAATCAAGAC 001840 001841 AATGTTTGCA GAATAAATGG AGTTACCTGC TTTCAGCCCC AGGTCATAGC TATTGTCTGC CCTGCTGATA TGTGATAATA 001920 001921 ATTTGTGATC ATGTTGTCTT AAAATGGGGT CACTCATCTC CAGTAGAATT AAGTCCACAG TGAAGTTGTC CCCCCATCCC 002000 002001 CAAAGAGATA AACATATATG AATGAACTCA CGTGATAACA ACTACTGCTG CCTGGGATCA TGAGAGACCT GAACTGAACT 002080 002081 GATAGGAAGT GAAAGGTGGC TGAGATAATG AGAATAGACC CATCTGCAGA GGATCATAAA ACCAGCAAAG ACAATATCTT 002160 002161 GTCTAAGATG CCTTCACAAA CTTTGTCCAT GAGAACTCTT AAGGATTTCA CCAGACCTGT TGGCTGCTGC TGTGATCTCT 002240 002241 GCCCAAGAGG AGCCTCTGAC CAACATCCAA AGGGCTTCTG GACCCACTGG ACTCCTCTGG AGGTACCTTA GTCTCCCGAT 002320 002321 CCATGGCTGT GTTTTTTTAC TCCCTTTATC GCTGCCTGTG TGTAGAATGA TAATTGCACA ATTGATAGTG TGAAGACCTC 002400 002401 TTGATAAATG GTAAATCTGA GCATATGTAT TTGGCTGACA TGTCATTGTG AAACCTCACA GCTTCAGTCA GTGTCAACGC 002480 002481 AGCTAGGGAG CATGTACCTA ATGCACATAT CACTGGGCAT AGTCTACAGG CACCTAATAA CTCAGGTACC TTAACAGTCA 002560 002561 CTAATGAGTG TCTCTCCAAG GACTAAACAA TGGAAGACTG TAGAAGATGC TATTCATTAA GATATCTCAA GAATATGGAA 002640 002641 GACTATTATT CACTTCTCAT GGGACAGGAC TTTATAGGGC ACCTGAAAAA ACTCCCATGA AAAATCACTT TTACAAAATG 002720 002721 TCAAGTTATG ATATCCAAGA TGAAACCAAT GAGTCACAAC ATTCACATAA TACACTGTAC AACCCTGATC TCTTGACTGT 002800 002801 CATCAAATGT TTCTTACCTC TAAACCAAAG TTTCATTTTA TAATTTAATT TTTCTCATTT TTTCCATTCT CTTAGCTTAA 002880 002881 GAAAAGATCA TTACAAACTT TTTGTAAGTT TTTCATATAT GCTTGCAAAG GGTTGTAAAA CTTTATTGTG ATTATTCTTG 002960 002961 CTTTAAGCTG AAACTTCCCT AATCTTTCTT TAGAGATTGT GGCATAGCAT GTTAGTTTCT TTTCCATATC CAATTGTTTT 003040 003041 CTGTTATGAA TACAGAAATA CAGGCACTGT CTTGTAACTT TAAATAGACA TCATCTCAAG TCTACAAGAA TTATCCAAAA 003120 003121 TGGTATTTAA TGACATTTCT AGGTCTTCAG ACACTATTAA TGCAGATTGT AGCCTCTAGG TCCTGAAGAT TTTACTAGAT 003200 003201 ACTGGTTACT GAAACTGAGC TTTCTTGAAT TCTTTTTCCT TCCACTGTGG TTTCCCGCAT TTCAACATAT CACCTATTTT 003280 003281 TGTCCTCAAA GGTTACTTAA ATGTTTTCCA CAGAATTAAA TTAAATATGA ATCATCCCTC CTCTGATTTT TGAAATGACC 003360 003361 CTTTGCTTCC TATGATAATG ATTCTTCTGG TCCGTTTTGT AGTTATATGT TAGAGTTTGT AAATAGTCAC ACATTTTGCA 003440 003441 ACTGCATATA ATTTTCTTAT TATTTTTTCC TCTTCCTCTA AAACTGCTGT TATTTCTTTT AACTTTTTGT GGGAAAAATT 003520 003521 AAACCCATCT TTCACTTTGT TGATATACTT ATTTATAATT GAACTCCTTG ATTTTTGCTC GAATTGCTTT TCAAGTTACC 003600 003601 CACTTTTAGG GAAGACATTA TTTGGGTTTT GTTTAGTGTA TCAGGCTTTT TTTAGTTAGT TGTATCAAGA AGTGTAGACT 003680 003681 TTTCTATACA TAATATCCTT TTTCCCACAG TATTTTTTTT TTTTTTTAAA GTCTAGCCAG GTGCAGTGGC TCACGCCTGT 003760 003761 AATCCCAGAC TTTGGGAGGC CGAGGCCGGC GGATCACGAA GTCAAGAGAT GGAGACCATC CTGGCTAACA CGTTGAAACC 003840 003841 CCGTCTTTAC TAATAATACA AAAAATTAGC TGGACATGGT AACGGGTGCC TGTAGTCCCA GCTAATCAGG AGGCTGAGGC 003920 003921 AGGAGAATGG CATGAACCCA GGAGGCAGAG GTTGCAGTGA GCCGAGATCG TGCCACTGCA CTCCAGCCTG GGTGACAGAG 004000 004001 CAAGACTCCA TCTCAAAAAA AAAAAAAAAA AAAATTATGT TAAAATAAAG GTCATCAAAA GATATTTTCC TAAA

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