Lnc-SNURF-3:1

Same as ENST00000549804.2

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID	ENST00000549804.2
Source	Gencode19
Same with	lnc-SNURF-3:1,NONHSAT041000
Classification	intergenic
Length	7844 nt
Genomic location	chr15+:25295779..25367623
Exon number	33
Exons	25295779..25295876,25304706..25304865,25307097..25307235,25309862..25310002,25315267..25315406,25317872..25318010,25319039..25319198,25320882..25321013,25322004..25322137,25324009..25324142,25326238..25326371,25327736..25327852,25328543..25328674,25330337..25330469,25332614..25332746,25335059..25335157,25336737..25336866,25338981..25339121,25342468..25342586,25343864..25343975,25344292..25344425,25349006..25349117,25351311..25351441,25352619..25352735,25353057..25353185,25354145..25354250,25354345..25354550,25354702..25354862,25356912..25357041,25360446..25360803,25362557..25362662,25363415..25363529,25364212..25367623
Genome context
Sequence	000001 ACCTTGTTCT TGAGCTGTCC GGTTGCCACA GGGTCGGACC TGGAGGCTGC AGACCATCGT GGCCCTTTGC AGTGTTCGGA 000080 000081 AACATATGCG CACCCCAGAA AAAAACATTC CTTGGAAAAG CTGAACAAAA TGAGTGAAAA CTCATACCGT CGTTCTCAGC 000160 000161 GGAACTGAGG TCCAGCGCGT TGCCTCCAGC AGGGACTGTT GGAGTGAGGG AGAGCTTCCA CTAGTCCCTA TAGGTTCCAC 000240 000241 CACCCAGGGC ATCCGCAGGG ACAGTTGCCG TGGGAGGTCC GCTGCCTGCT GTCAAGGAAG ATGGTCGATG CTTCTGAGAA 000320 000321 ACAGGCCCTG CGGGTTCCTG GATTTGGTGT GGCCTGGCAT CCACGGTGCA CCCCGTGCTG GCGGGTGGCC CAGGACGGGG 000400 000401 CAGTTGCCTT GAGAGGCCCA CCGCCTGCTG GCATGACAGA TGGTCAGTTC TTCCGAGCAG TGGAATCTCC ATGGAGTCGT 000480 000481 GGAGTCGGTG TGGCCTCGCA TCCACAGTGC ACCCTGTGCT GGTGGATGGC TCAGGACAGG GCAGTTGCCG TGGGAGGCCT 000560 000561 GCCGTCTGCT GAAAGGAAGA TGGTTGATGC TTCTGAGCAA TGAAGGCCCC ATGGAGTCCT GGATTCGGTG TGGCCTTGCA 000640 000641 TCCGTGGTGC ACCCCGTGCT GGTGGATGGC TCAGGACGGG GCAGTTGCCA TGGGAGGCGC AGGCCTGCTG GAAGGAAGAT 000720 000721 GGTCGATTCT CCCAAGCAAC AAAGGCCACG TAGAGTCCTG GTTTCAGTGT GGCCTGGTAT CCACAGTGCA CCCCGTGCTG 000800 000801 GTGGGTGGCT CAGGACGCAC ACTCATTTCC TCTGCACCTT CCTGGTGTCA TTGGCATGGA AGGAAGGCCC TTGTCCAAGA 000880 000881 AGGATGGTCT TCGTCTTGTG TGATCTTTGA GATGCCATGA GGCCCCTGGA TACAAATGGT GTGGGCTCCT TTGGAGGCTT 000960 000961 TTGGATTTCT CCTGAATGTG GCGTTGGTAT GGAAGGAAGG CCAGTGACCG CAAGGGATGA CTTTGATCTT GGGAGATTTT 001040 001041 TGGAGATGGC AAAGTGCTTC TAAACATGTT TGGCATGGTC TCCTTCAGGC TGGTGGATAC CTCAGGATGG TGGCGTTGGC 001120 001121 ATGGAAGGAA GGACTGTGTC TGTGAGGGAT GATCATCCTC TCATGTGATC CTTGGAGATG CCAGGAAGCC CCTTGACACA 001200 001201 TGTGGCATGG GCTCCTTCAG AGGCTTTTGG ATCCGTCGTG AATGTGGCAT GGGCATGCAA AGAAAGACAG AGGCTGCAAG 001280 001281 GGATAAACTT CATCTTGGGA GATCCCTGGA GATGGCAGGG AACCCATGGA CACATGTGGC ATGGGCTCCT TTGGGTGCCG 001360 001361 GTGGATCCCT TCATACGGTA GTGTTGGTGT AAAAGGCAAA CCCGTGTCAT GAGGGATGGT CATCATCTTG TGTGATCCTT 001440 001441 GGAGATGGCA GGAAGCCCTG GACATACATG GTGTGGGGGC TCCTCCAGAG GCTGTTGGGA TCCTCCTGGA TGTGGTGTGG 001520 001521 GCATGGAAGG AAGGCCAGTG GAGACAATGG ATGATCTTGT TCTTAGCAGA TCACTGGATG TGGCAGGGAG TCCTAGGACA 001600 001601 TGTGTGGTGT GGGCTTCTTC AGGTGCTGGT GGTGTTGGCA TGAGGAAAGG AGGTATCTTC GAGGGACAAT CTTCTTCTTG 001680 001681 TGCGATCCTT GGAGATGCCA TGAGGCCCCT GGACACATGT GGTGTGGGCT CCTTTGGAGG CTGTTGTATC CCTTCTGAAT 001760 001761 GTGGCGTGGG CATAGAAGGA AGGCCAGTGG CCACGAGGGA CAATCTTGGT CTTGGGAGAT CCTGGAAATG ATAGGGAGTC 001840 001841 CCTTGATATG TGTGGCATGG GCTCCTTCAG GTGCTAGTGG ATTCCTTAGG ATGGTGGTGT TGGCATGAAA GGCAGGCTTG 001920 001921 TATCATGAGG AATGATTGTC ATCTTGTCTG ATTCTTGGAG ATGGCAGGAA GCCCCTGGAA ACACATGGTG TGGACTCTTT 002000 002001 CACAGGCTGT TGAAACCCTC CTGAATGGGC AAGGACTGGA TCGATGATGA CTTCCATATG TACATTCCTT GGAAAGCTGA 002080 002081 ACAAAATGAG TGAAAACTCT ATACCGTCAT CCTCGTCGAA CTGAGGTGTT GTGGCCATGG AAGTAAGGCC AGTGGCTACG 002160 002161 AGGGACAGTC TTCATCTTGG GAGATCCCTA GAGAGGGCAG GGAGCCCCTT GACATGTGGA ATGTGATCTC TGTTGGGTGC 002240 002241 TGGTGGATCC CACAGGTGGT CTGGCATGGA AGAAGGCCAG AGGCTGCGAT GGATCATCTT TGTCTTGGGA GATTCCTGGA 002320 002321 GATGGTGGGG AGCCCCTGGG CACGTGCAGC ATATGTGGCG TGGGCTTCTT CAGGTGCTGG TGGATCCCTC AGGATGTTCA 002400 002401 TTGTGGAACC AGCACAGATT TTCATACGAA AGTTATTTCT TTTTAACCTC AAAAAGTGAC AGAATGGAGT GTATCATGAA 002480 002481 AAAGTCTGAC ATCAAAACCT CAAAATGTGA TATTGATTGG GTGAGATAGA ATTCCATGGA ATTTCATTGC CAAACCAGTG 002560 002561 AAGTGCTAAT TTTGACATTT GTACCAGCTA ACGTAGCTGT GAAGAAACAC ACCAATACAC TTCTAAGGAC AGCATAGACC 002640 002641 AAGATCTAGG TTTCATATGG ATGAATTTAT TCTTCCCTTT GAGGCAAGAC AAGAAGGAAA GAAAGTATTG GGAATAATGC 002720 002721 TGCCCTCCCA TCCTCAAGGG CCAGTGGGAA CTCTAATATT GATTGGTTTT CACAGAATTC CATGGACTTT AACTGCTGAA 002800 002801 CCAATGATGC ACTGATTTTG TCACTTGTAC CAGCTAACGC ATCTGGGAGG CAACAAAACA ATACTCTCCT GAGGTTAATG 002880 002881 TGGACCAAAA ACTAGATTTC ATATAAAAGA GTTTATTCCT TCTACTTGAG GTGTGACATG AAGGAAAGTA ATGGAAATAA 002960 002961 TTCTGCCCTC CCATTCTCAA GGGCCAGGGG GAATTCAAAT ATTGAACGGA AGTGATTTTG GAATTGCATG GAATTCTCAC 003040 003041 TGCCATCCCA AAGAAATGCT GATCTTGTCA CTCTTACCTG TTTCATTCCC TGGGGGCAGA ACAAAAGGAC GCACTCCAAA 003120 003121 GATCGGCATG AACCAAGAAC TGGGTTTCAT ATAAAATATT TTATTCTGTC CTCTTGAGAT GTGACATGAG AAAAGTATTG 003200 003201 AGAATACTTC TATCACCTCA TCTTCAAGAA TCCGTAGGAA TTCTCCCATG GTGGACTTTA CGGTTAACCT GAACAGGTCT 003280 003281 TGGAAAAAGG ACTTTAAACA TTCTCCTGTT CTGTGGAATA AGTATACTTT TTTCTGGACA TACACCTTGT CAGTGAGTTC 003360 003361 CATGTGATAC TAGAGTTGCA TAGATTTTTA ACCTTTACGC CAATGAAGAT CTGAGGCAAA CATTGCCCCT TTTTTAGAAG 003440 003441 TTTGCATTTG TCACTGATAA CTGTAATAAT TGATCTTGTT GAAAAGCCTG GGAAATGAAG ATCTGATATG TCACTTTTAC 003520 003521 CGGCTTCCTC AACTGAAAAA GAATACAATG AAACACGCTG AGAATTTTTG TGCTTTCTCA GTCTTGCTGA TGATCTTTCT 003600 003601 ATGGGCCTGA AGCGTGGAGA GTGCCAGAGA GGCTGATCCT CAGCAGTGTG GCAGAGGAAA GTTGGGTGCG ACTAAGGGGT 003680 003681 ATGCGGTGCC CACATGCCAC TGGGTCCTCA GCAGTACCAC CTGATTGGAA GTGATATTGG TGGAAGACAA CATTTTGCCG 003760 003761 CTTGGAATTC TCACCTCCAC ACCAAAGAAG TACTGTTTTT GTCATTTGCA CCAGCTTCTT TCTCCAGGAA AGATCAAAAC 003840 003841 GATGCACTGC AAGTGTGATT GGTCCAGATA GCTGCCTTAT CCAACTGCCT CCTTTGGACC ACTTCATCAT GGGACAGCTT 003920 003921 GATGCAATCT ACTTGACAAG ACCCTGGAAC CCCACACCCC TCATGGAACC AGTGTCCACC TCCCAGTCAC AGTGTGACCC 004000 004001 CAGGGAACTC TTGCCTGCTT GCTTTAAACC CACCACTTAA AAGTCTCCAC AGAAAACCTG TTTGAATAGT ACCCTTGACC 004080 004081 CAATAAGGGC ATTGGCCCCT GGGTGTCTCT CTCTCTCTCT CTCTCTCTCT CTCCCTCTCT CTCCCTCTCT CTCTCTCGCT 004160 004161 CCCTGACCTC TGCGTGTGGA CTCCAGGCAT GCCATATACC CCTCAGGACC TGAAGCAAAA GAATGAATTA AAGAAAACTC 004240 004241 CAGAGAATGA GCTGACAACC TACTCCCTGG TCAGTGGCTC TCCATGCCTA CCTGTGGTCT CTTGGACACC CTTGCAGAAG 004320 004321 ATGACTTCCT GGGAACTCTT CTGGGAGTGA ATGTTATCAG CAAATTCCCA AAACAACACC CCTTAGACAA AAAGCCTCCT 004400 004401 CACCTATGCA TTGCCTAGAC CACCCACTAA AGGTGATGGC CACAAAGAGG TGGATTTGTT GAGTTGGTGC CATTCCTTCT 004480 004481 ACTGCCAGCT TCACCAAAAC AATGACACAG TCTTCCTTCC GCATGGAGAC TCTTCTCTTT CCTGTGTTGC AGTGGATGCC 004560 004561 TCCTGCAGAT AAGAAATGCT TAACTGAGAA ATGCTCATGT TGGGATATCA TCGATGAGAC TTTAATTTGG GCATGGTGAC 004640 004641 TGTTTCCCTT GCTGCCACTT GACTCAATCC CAGGAGCCTC AGTAGAGGAT ATAATATTAC ACAAGATGCT CAAAATGGTG 004720 004721 GAATTGCTCA GTGCTCCCAT AAATATACAT TTATAATTTT CATTTGCCAC ATGGTAAACT GAAAAATACA GACTATATTA 004800 004801 AAAAGAAACT GCATGATTTT TTTTCAAAAA TTCAAAGCAT ATTTAAATAA TATATAAATT AAATGCCCTC CTCTCTTCCA 004880 004881 ATTCTGTCCC TATAGTTTTC CTCTATTAAG TGAACTACAT GCATTCTTTT AGTGGATAGA TGCACACAAA CACACAAGCC 004960 004961 ATTATGGGGA AGGATCCACG TGTGTGGCCA TATTGTAACA CATTTTTCTG CAAATCACCT CTTTCATTTA ACAGCCCTTA 005040 005041 TTCAATGGCC TTTTTCTTTT TCAGTAGTAC ATACACATCT GTGTCATTTG TTGAATGACG ACATGAATGT TTTGTAGATA 005120 005121 AAATATAATT AAATGTTTTA AGCATTTCTC ACTCATAGAT ATTTATGTTA GCACCAAATT TCTGTGCAAT GAACCTCCCT 005200 005201 ATATATCAGT AATTTTGCAT TTGTCTATAA TATCATAATA AATTACTTAT CAGTTGAATT ACTGGGATTA AGTATGTGCA 005280 005281 CACTTTATAT TTATATTTTG AAAATTATTG CAAGATTGCC TTCAAAAATG TGGTTAACAA CTTTATCTTC AAATGGCAAT 005360 005361 GAATGAGATT GCCAGCTTTC CTACAGCCTC ACAGACAATG GATTTTATAA ATATTTAACA TTTTTGCCAA TGTGATCACC 005440 005441 CAAACTATTG TCTTAAATTG TATCTCTTTT GTTTTTGAGT TTGGTCATTT TTTCATGTTT ATTAGCCATC TGTATTTTTT 005520 005521 AATTTCTTCT TTATGTCCAA TTTTGTGGGT GGGAGGAGGA TTTAGTCTCT TCCTGATTTC GAAGAGCTCA TTTACTATTT 005600 005601 CGGGAAATAA GATTTGGATT GTCAACCATT ATAGCTATTT TTTACACACT TTTCAACTTT GTTTTTGTTA TAAGAATGTG 005680 005681 TATGATTGTT ACATGTCCAA GTATAACCAT GTTCGCTTTT ATGGCTTCTG AGTTTCATGT CATTTTTGGA AAGATATATA 005760 005761 TATTGAGTCC ATAAAACCCT TCACCTATGT TAAATTCTAA TTCTTTTGTG TTTTTTTAAT TCAAATTCTT AAATCATGAG 005840 005841 AAATTTTTTT GTTTTGAAAT CTTAAAGTTG CCAAGTTACT TGCCATTACT TGCGATTATT TGCCAATAAT TGCCCATTTA 005920 005921 TCTGTACCGC CATCTTGCGC ATATGCTGTA CTCTCATCTG TGACTGGCTC CATTTTTGTT CTGTGGATTT GTGTGTCTCT 006000 006001 TCTTCTGCCT CCTGTCTCGT GTCTGCTCGT TGGAAGAAAT TACAGTTTAG ACTGCAATTT CATCAACTTT AATAAATCAA 006080 006081 TTGAGGGGAG AATTGGTTTT TAAAAATATT AAGTAAGTCT TCGTATCCAA GGACAAGGTA TGTCTTTTCT TATTCAATAA 006160 006161 TTTTAATTAC TGTTAATATT TTCACTGTGG TGATGGGAGT TTTTCTTTTA ATTTATTTTC TTGTTCATTT TTTGTATCTA 006240 006241 AAGTTTTTGT TTTGTTTTGT TTTGGGGGTA AGTTGTCACC TTACTGTTTC TTGTTGCTTT TCAGATTTTT TCAAAGTATA 006320 006321 GACTAAATCC TTCACAAATA TTTAAAGTTT TTATTTTCCC CCTTCATATT GATCCTGATT TTAGTTATGT TGACAAAGTC 006400 006401 CACAGACTGT TACTATCAGA ACACTTGAAC AGTTATGGAA ATATTACCTA CCCTTGATTT AATCAGAGTT TAATGGTATG 006480 006481 CTTCTTTGGT TTGACTGGCA CATTGTCGCT GGTCATTTCC TCCCAAAGAC CACCAGAAAG AGCTATGATC AAGCAAAGCT 006560 006561 GAGTTTGTTA AACTTACCTG CAGCAAGGGA AAACACCACC TTGATAGGGT TTAATAATGT TTCAAAATCA AGAAATGAGG 006640 006641 CTTTGGGGTC TGGGCAGGGA ACTAATTAGA AATGGGCAAA ATTTGTCATG CAATACCTTG TGGGAAAGTG AGATGAGGTT 006720 006721 CTTAATGTGA GTATTGATGG TGAAATCATT TTCTAGGTGA GCTGTTTGCC TATATAAAGA TGTTATCAAT GACAGAAGAA 006800 006801 CTATTTGCCT AGATAAACAA ACTGAATTTA TTTATTGGTT TACAGTTTTA TCTTGCTGGG CAGGACTCTG CTGGGGGTGG 006880 006881 TATCAGGTCT TATTCCCAAT AGGTAAGTTA TTTGGATATG GGTGGTCTTA ATCATCAATG TGTAAAATGC TGATTTTAAG 006960 006961 TGCGAAATAC TTTGTCTACC ATGTTAGGAA AGTCTGCCAC CTTTTATCTT TTTTAAGGAA TTTTAATCAA AACCAGGTGG 007040 007041 TAGATATAAT CAAATTGTTT TGCAGAATCA ATTTTCCTGT TCTCTTTAAA GACTTTTATC ACTGTGAATT AATTTACTAT 007120 007121 TATTGCAACT TCCTTTAATT CCTTGAATGA ACAGACCCTA CTGGTTTTAA AAATGTTTTA TTCTTTTAAT TTACTACTTA 007200 007201 ATTGTGGGTA TTTTAATTTG ATTTGGAATT TTTACAAGTA TACAACTAAG TGAAATTGAT CTGTGATTTT TCTTTTTTGT 007280 007281 GCTATTTTTG TCATGTTTTG ATATCAGATA TTCTGGTTGT GTTAAAATAA TTTTGAGGAT TTTCTTCTTA TACTGTGTTC 007360 007361 TAGAGTGGGT AAAAAAGCCC TAGTCTCACT ATCAGTGTTT AAGTGAACAC ATCAGTGACA TCATCTGGAC TCTCCTTTGT 007440 007441 TTTTGCTGGT TTGGAGTTAG GACATCTAGA AGTTTTTTTC TTTTTTTCCT TTTTTTGTAT GGTTATTGCT TGTTCTTTGT 007520 007521 TTTGTGTCAA ATTTAACCTG TTTTCTCTTA GCAAATCACA GCTCATGCAG ATTTTCAAAC ACATTAGCCT TGTTATACAA 007600 007601 AGTGTTCTTT CATCATTCTA TTAAATTTCC ATTTTCATTC CAGTTATAGT TATTTCTGCT GTGCCTTTGT TAATGAATAA 007680 007681 GTTTAAACAG TGGATGTTTA GCATCACTAG CCTTCCCCTT CCATCTCCCT TAATCAGGAC CTTGGTATAA TTTATCAGGT 007760 007761 ATTTTTTAAG GTTCTAATTT ACTTATATAT ATTGTTTCTG TATTCTTTTG TTTCTTTTCT TAATAAATTC TTAAACCTGT 007840 007841 GTAA

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