Lnc-SOX11-3:4

Same as ENST00000431188.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID	ENST00000431188.1
Source	Gencode19
Same with	lnc-SOX11-3:4,NONHSAT068827
Classification	intergenic
Length	3329 nt
Genomic location	chr2+:6072920..6125025
Exon number	5
Exons	6072920..6073053,6109246..6109370,6120552..6121108,6122406..6122989,6123097..6125025
Genome context
Sequence	000001 GGCAGTGTTT TGACGACTGC CTCACTAAAG GAAGCTAAAA GCTGTGCTGA TGCCTCCCAG ACGAGCCTCG TTGGAAGCAC 000080 000081 AGAACCTTCA CGGCTCGGAG CCGCTGACAC CGTGACAAAG GGAGCCCTGC TCAGGATGCG GCAGCAACTC ACTGTGCATG 000160 000161 TTTTTACAGC TCTTCTCCAG TAATGCTGCC ATTTCCACTG CAGACCACAG GATAAAAGGA CCGCTTCACC GTGGCCCAGG 000240 000241 ATACCCTTTT AAGTAGGAGA GCCAGATCAA GGAAAGAGAC AGGAAAGCAG ATGATTTTAC CTGCCTTCCC TAAGTGCACT 000320 000321 CGGGAAGAGA AGGATCATCT CAAAAAGGGT TAAGGAATGA GATCATGGAA ATCACTTACA CACGCGGTCG CGGCTTGGAC 000400 000401 TTGGCTAGTG AGGCCGGCCT GCCCACTCTG CTTCCATTCA CTCAGACACA GCTTGGGCTT TTCCTCCAAG TGCTGGTAGC 000480 000481 AGTCATTTAT GAGGGAGGAA AGGAGCAGAA TAAACACACT TCTCAGCTCC CAGGCACTCT GTGTGTGTAG ACAGAGGCTC 000560 000561 GGGTGGATGA GAAACCTCAG CACACCCATG ATCTTTGTCA AGGCTGGAGA CTTGCAGTGC ACACTCCAGG CCTGTGGAAA 000640 000641 TGGTTCCACC TGGGTCCCTC TATTGCTCCT CAGCTGCCAC ATTAGGGCAC CTCGCCCAAG TCCACGTGTG GGATGTGCCT 000720 000721 GCCTGTGGCC CACCTAACGT ATGCAGTCTG TCTGGAGTGC CAGGCACAGG CTCCTCACGT GGGCTTCAGC TGGAATTGAA 000800 000801 AACTGCATTT CTCAAGAATC ACATTGCCTT TGCCTCGTAG GCTCAGTTGG ATCTCCAAGT GGCGGTACCG TTCTCTCCAC 000880 000881 TTCAAAAATA CACAGAAACA TGTGGAAATG TTCTGTCATC CAGAATGAAA AGCATGTGCA CCAAATTTTC ACAGACCTGA 000960 000961 TTCGAATGTA GATAAAAGTG CAAAATCCAG AGGAGGGAAC ACGCTATAGA AATCCTGTCT TCTATACTAT AATTTAATCA 001040 001041 TCGTGTGCCA CAGAATGTCT TTGCATAAAT TACAACCACA ATAATAGCAT CACTTTCACA AAAGGTGGCC TCTAATCGAT 001120 001121 TTGACTCTCC AAGAGATGGC TGGGTTTTTC AAAGCAGAGA AATGATGACC TGCAGTCTTA AAGAGCTGTT GATTGCACCT 001200 001201 GGGGCTCCCG TGGCCGGCGC CCATCGAGCA GCCCATCCTG GCTGTTCCCT TGTTCAGCTG ATTTTCTTTT TTATCTTGAC 001280 001281 ATTTGCTAAC CGCTTGGTTT TTATTTTCCG GGAAGAGAGG ATTATTGGCA ACTGGCACCA CCCCCATGTC TGGAGGAGGG 001360 001361 ACGTTTCTAG GATGACCCCC AGAGTGGAGA AATAGCCGAG TGCTTTGGAG TCTTCTCAGA TGTGGACGAA AACAGTTCGT 001440 001441 GAGCTGCGCT GAGCAGTTCC GGAGCCCTGG CTCCCTTTCC CCGGGGCCTA AGCCCCCAAG AAGAGAGTCT TTTTCAGGAC 001520 001521 CATGGGAGCA GGTTTTAAAA GGCTTTCTAT TGAAGCGAGG CCGTCAGCCA GCCGTGCGTG TCCGCATTGT GGTGGTCCCA 001600 001601 GAGCCTTATG GACAATCCTT TGAAAGAATA GGGTTGGGAA GATTCTCAGG ACAGAAGCGG CTAATTTCCA TCCTTGGAGC 001680 001681 TTTATCTCAC AAAGGATATT TGATAGAAAG AAAAAATGGA GTCTGTGGAA GCTTTGCTCC TATTTCCAAA TGGGTTGACT 001760 001761 CTGGATGCAA AGGAATATTT TCACATTTTT CCCAATAGAG GAAAGCTTTT AGTGCCAAAA TCCTCAAAGG AGAATGAACA 001840 001841 TCACACATTA CACATGTATG TATAAGGGTA GAATAATATG GTACAAAATC CAGTGAGTAC AAGCACACAA TGGGCATTCA 001920 001921 GTACAGGTTA AATGAATATG CAAGAAAAAT TCAAAGTTGT TGTTGCTGTT TATAAGGGTG GTGATTATTA ATAGATGCAA 002000 002001 ATGTATACTC CCTTTTGTAA TCACAGCAAG GTAAAAGTCT TATCTCTGAT CATTACCATG AGGACACTTA AATATTTAGC 002080 002081 CCTGGGGACA AAATGGTTTG TAGGCAGGAC GTCCTGTGTG TTTATGCACA CATAAAATGC CGCCCTGGCC CCAGGACTGC 002160 002161 AAGGCCTCTG ACTGCATCAT TTACATTCAG GGGTGGTCCT GATCAACATG GCCCCATAGA ATAATAGAGG GAATTTCAGA 002240 002241 TAGTACAGCG TTAGATAATA AGCGCTTTCC ACTGACTCTG TTTACATGTG GAAATTAGAA GCGCTGAGTG AAAAAGAGTA 002320 002321 GTGAAAATAA AGACAGGAAG TATATACACA ACAAACAATT TTTCCTCTCT GCAAATCGGA TTATTCCCTT GCGCACCCCC 002400 002401 TGCAACCCCC ATCTATGATG TCAAACTCAA TGGACTGTTG AACTAATAGC CTGGGAGTCA CCAGCGTGAG AGTGTGTATG 002480 002481 TCCACGCTGT GCAACTTGAA TTAGGCTGGC CACCACGGCT GTGTACAGCT ACCCCAGGAA GAGCCCCTCC CCTCCTCAGC 002560 002561 ATTTCAGTGG AAAACGTGCT GACTGGGACC CAGCTACAGG AATCACATTT GGGCAGAGAG AATGGCTTAT CCTTTTCATG 002640 002641 AGGGGTCTTG ACTCAAGAAC ACTTGCCAAT TCTGCTTGAC CGTTTCCCAT TCTTTACGGT TTTTCCTATC ACTCCTTAGA 002720 002721 CTAAGAAAGA AAAATCTGTA GGAATGATTC GGTGGGATTT CTCTTTTGTT CCTAAATAAA CCTTATCCCT GGATGAGCTC 002800 002801 GTTCACACTA GGGAAGTTAC TACCACTGGC TTTGAAGCCA GGCAGATCTG GGTGTTCCTT CCCATGTCTT TATTTGCTTT 002880 002881 GTGGGGGATC TTTTCCCAGC CTTTCTGCTT TCATCCTTCT TAGTGAGAGC TTCTTCAGCT GCAGAACAGG GGCAATAATG 002960 002961 CCTACCTTGC TGGGTTGCAG CAGAGAATGC TGCTTATGCA GGAAAATAAA AAAACACATA GCACACAATG GGAGCTTAAT 003040 003041 ACATAAGAAT TATAAACAGT CTTTTGTGTA TATATCAATG TATTTCATGT CCTTAATGTT TATTTAAAGC AAGTACATTC 003120 003121 TTTTGAATTA AGCATAAAAA GGTCATAAAA TGCCAGAGAT GTGCTTATTT GAAATGTTTG CAATGCTTTG CAATTGTTTT 003200 003201 AAAATAAGGA GATGATATAA CAGGGTGTTA CCTCCGCCAC TAATTAGTTA CGTAATCTTA GATTATGTCA CTTCCCTGGG 003280 003281 TCTCAGTTGT AAACAGTTGC TTAATAAATA ATGTTTGTTT TGCTTTCAT

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