Lnc-SOX2-1:3

Same as ENST00000493521.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID	ENST00000493521.1
Source	Gencode19
Same with	lnc-SOX2-1:3
Classification	intergenic
Length	1239 nt
Genomic location	chr3+:180774468..181457813
Exon number	7
Exons	180774468..180774574,180806665..180806705,180893302..180893371,181281508..181281716,181328649..181328717,181417386..181417671,181457357..181457813
Genome context
Sequence	000001 AATGCATTTG CTTTCAGCCG CAGAGAGAAG AAGCTGCCCA AGAATGGAAA GGAAGAAATA TATCACATCA TCTGTCTGTC 000080 000081 CACAGGCTTT CCTTGGGGCT TATGAAGTGA ATGAAGGAGG GAAGAAAGGA GAGACAGAGA AAATATGGAT TTCCTCATGG 000160 000161 TTGTGATTCC TCTTCACTCT TTTGAATTTG GAAGGATGGC ATACACATCT GAAAAATACC ACTACTTCCT TCATTGGACT 000240 000241 GCAAGGTATT TCTGTTTGGA AAAGTAATGG AGTCCAGTCA ACTTCATTGA TCGCCAAGGA CTGTCAAAAT TATAAAACTT 000320 000321 GCTGTGGAGC TCTGACATGC CAGAAGCCGC TAGAAAAAGA AGTTTGACAT TCAGAAACTT ATCAAGAGGT TCTACTCTTT 000400 000401 GGATAGAGAC CAAAATCATA CTTTGAAAAA GCCTGACAGG TTTCTTCGGA AAAGTGGCCA TCCATGGAAT GAATGAAATG 000480 000481 TTCTCTTTCT ATTCCAGGGA TTGCAGTGGC AAAGCTAGGC TAGGTCTTGG AGGCTGGTGT AAGGCGATGT GGGTGAAGGC 000560 000561 AGGAGGCTGA TGGAAAGACT GGGGGGAAGA AAAGCCGAAA TGGATTCACG GTGCCTTGGA TGAAGGACGA GAGGGGAACT 000640 000641 GCAAGCTCCT TCAACTGGTT CTGTCCGGTG AGAAGTGATC AAGCTTGGGC TGACAAGAGG CTCAGGGAGC CCTCACGTTC 000720 000721 TTTCGCTTTT TTACCTGCCA ATCAAACTGC TACAAGACAA CACCCTGATC TGGCATGGAC ATATCCAACT TAGAAATAAT 000800 000801 GTTTCATTCA AGATAAGGCT CGTGGCTTAG GAGATTGTGA CCTGGCTTGC ATCATTCTAA GACTTCTATC GTCTGTTTTC 000880 000881 AAAACCCAAG GAGGACCTCC TTTTCTGTGT GATAGTTCCT CATGCTTTGC CAGCCACTGG GTCTTTAAGG AAGCTTGCCA 000960 000961 AGAGTTCCCG GCTGGGAAGG ACAGTTCGAG TTCATCATAG ACAATGAGCT GGCACCACAG TTTAAGTGAC TCACCAACCT 001040 001041 GGTTGCCCAC TTCAAAATGT CAAGAACCAC ACTATCTAAT TGAAAGAACT GTGTTTTAGC AAAGTGTAAT TGGATCGCCT 001120 001121 GGCAAGATCA TCTCAAACTA TGTCTCTGAC CTTGCCTTTC AGTGGCTATT TTGAGCACAA GAGGAGAAAG GAAATGATTC 001200 001201 CTGAATTATA TCTTGTTTTT AAAAATTAAG ATTAATTAA

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