Lnc-SOX5-1:1

Same as ENST00000538297.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID	ENST00000538297.1
Source	Gencode19
Same with	lnc-SOX5-1:1
Classification	intergenic
Length	1329 nt
Genomic location	chr12-:23334268..23404433
Exon number	2
Exons	23334268..23335557,23404395..23404433
Genome context
Sequence	000001 CCCGCCATGA TCGTGAGGCC TCCCCAGCGA TGTGGAACTG CTGGAGTGCA ATACCGTGAT CTCAGCTCAT TGCAACCACC 000080 000081 GCCTCCCGGG TTCAAGTGAT TCCCGTGCCT CAGCCTCTTG AGTAGCTGGG ACTACAGGCA CGTGTCACCA CGCCCGGCTG 000160 000161 ATTTTTGTAT TTTTAGTAGA GACGGTGTTT CACCGTGTTA GCCAAGATGG TCTCTATCTC CTGACTTCGT GAGCCGCCTG 000240 000241 CCTCGGCCTC CCAAAGTGCT GGGATTACAG GTGTGAGCCA CAGCGCAAGG ACCATAATTT ATTACTTTTC ATGATTCCTT 000320 000321 GGATCAGGAA TTTGGGCAAG ACACAGCTGG ATAGTTCTTT GGCTTCACAG ATGGCGGCTG GAGTCATTGT GTAGATGCAT 000400 000401 GTATCTGAGA GCTTGGCTAG GGTTGAGACA TCCGTGATGG CCTTTAGATC TCAGAAAACT CTGCCCACGT GAACTCTAAG 000480 000481 CATTTACTAG TTTTTGCTGA ACTTCCTTCC AGTATGTTCA CTGAGTCCCA AGAAGAAGCA AAAGAGAGCT GCTAAGTTTC 000560 000561 TTAAGCCTGT GTTCGGAAGT CCCAGAACAT CAATTTTATC ACGTTCTATT GGTCAAAACA CATCACAAGT CCAGAGCATA 000640 000641 TTCAAGAGGA GGAAAATACA GTTCATCTCT GTTATGAGCA GCTTGCATGA ACAAGAATGG CAGTAATAAT TGGTGACCAT 000720 000721 ATTTGGGGAC TCTTTACCAA ATCAGTTAAA AGAACACTAT GGCACCGGCC ATTTGAGCCC CTCTGCTCCC AAACCACCCC 000800 000801 CTGAAAGCTG GATAGAAAAT GGAAAACCTA TCAGGAGAAC ACTATGAGTT TGGTAATAAC AAAGCTACAA GATATTACAG 000880 000881 AGAGAGAAAG GAGGTCACTA CCACCAACAG TGTGGTCCAG GATGTTTGCT GGTGACATCA TTGTGGAACA AGAGACAGCA 000960 000961 GTGGATGATG AAAACAGCTA GACGAAAATA TTCCAGAGTT GCAGAGATTG GTTTGATTTA TATATGAGAG CATTCTCCTC 001040 001041 TCTTTCTCTT ACTCACATTT TGGACCTCAG CACAGACTCT TGAAGAGACT TAAGGGTTTC CTTCCTCTAT TTGAAAGATG 001120 001121 ATCAGGGACA CCTAGTGATA TAAGCTGTTA AGGTGACCTT CCTAAGTTGC ACCAGCTGCT AATGTCCAAG GGACATTTAC 001200 001201 ATTGCATAAA AATTTACTAT TTGCATATTC TTACTTCTTA ATTTAAAAGA AAATTTATTT ATGTATTTTT ATATGTATAC 001280 001281 CTATACATAT GAAAATTCTG AAAGAATATA TAAAAAATTT TAATGGTTA

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