Lnc-SPAM1-3:1

Same as ENST00000484322.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID	ENST00000484322.1
Source	Gencode19
Same with	lnc-SPAM1-3:1,NONHSAT123074
Classification	antisense
Length	4310 nt
Genomic location	chr7+:123672259..124035172
Exon number	9
Exons	123672259..123672333,123689186..123689278,123992870..123992905,124000163..124000252,124016376..124016450,124025652..124025703,124028468..124028581,124029526..124029610,124031483..124035172
Genome context
Sequence	000001 GCCCCAGTAC GTTGAAGAAG AAGGTGAAGA AGATCTCATC CAGAAAGCCG TGCATTCCGA AGAAAAGAAA GCGGGGATGG 000080 000081 TGTTTCCCTT CCTGTTTGCT GATCCACTGG GGCTGTCCCA GAAAGAGAAC TACAACGCTA CTCTTTCCCA TGCCTTGCTT 000160 000161 GTCCACAGGT CATAGGAAAT GAAACAGACT GCTGTTTTCA TGAGTGACCT GTTCTCGAGC CTAAGAATCT CTTGGGCCAC 000240 000241 CCAGCCCCAC AGAGGCCAGT AGGAGGTCAA CTCTCCACCT CCCTAAAAAA AAAAAAAACG AGTGTGCGAG AAGTATGTTG 000320 000321 TAATTGAAGT AGCATACTGC CTGACACCCA AGAGGTTGCT CTGTAAGTGA ATTGCCTTTC ACCTCCTGCC ATGATTCTGA 000400 000401 GGCCCCCAGC CATGTGGAAC TGGAGAAGGG AGATGAAATA ATACCAGCAT CCTGAACCTG AATGTCCAGC TTCGCCTTGT 000480 000481 TCTTTGTGGA TTATAAGACC ATTGATTAAA TAAATCCTTT CATCAAAATT ATCTTAAAAA AGAAACTACC ATCTAAATCC 000560 000561 AGTTATTCCA TCTGACTTGG TAGCAGTGAT GTTTGGAGTT TAGGACCTAA AGGTGAAATG ATATATGTAC ATATATACAT 000640 000641 ATGTACTCAC ACAGACACAT ACACACACAC ACATATGTAT GTGTGTTGCC TGGAAAGCAA GTGTGTAGAA ATCGTGGGAT 000720 000721 TAGGATTAGG ATTATGGGGA TCTAACTGCG TCCATGTCAT TCTTGGAGAA ACAGTTCTAA GAACAAATGC TGAAGGCAAA 000800 000801 CAAATGATGC ATTCTCAAAT GAAAGAGGTC TGAACTGAGA TTGTGCCCAT CAATTCCTGA GAAGAGAATT TTAACAAAAC 000880 000881 GCAGCTGAAA GAGATGCAAG CTAAAGCCAG GCCACAAATT TTATTTACTT AAAAATATCA GGGAGCATCC ATTTTTCCTC 000960 000961 TTTCAACATG ACATGTAAGA CAAAGCATAC TGTTGAAAAG AAAAATAAAA TGATGTTTTA ATAACTCAAA GAAGGAACAC 001040 001041 GTACATGAAA GTGGTTTCTC ACTGGAATCT GCAATAGTAA CAAAGGAGAC AGTGAGCATC AAACATCTGG GTTGTGGGCT 001120 001121 CCCATACACT TCCATGAGAT TATCCAGAAA ACCATGAATT CTTGGGTGAG TGGGCAATTT TCCTGATAAG AGTGGATGGC 001200 001201 TACAAGAAAG GCATCACCCC AACACTGGCC AGACTTTCAC CTATAATCTT GGGTTAGTTG TCTCATTGAG TAGAACAGAA 001280 001281 AAATAGCATC AATATGAATT ATTTTTTAAG GAGGTAACTT TAGGATTTTT CTTCTGAGCA ACACACAAGC AAAAAAGAAA 001360 001361 AAAAAAAGAA AAAAGAGAAA AACCACTGAC CATAAATGGC TTAATCTCCA GGCCCAGCCT CCAGTGTTGC TCCAGATTCA 001440 001441 AACTGACATT TGATGACAAT ATAAGACATT CATCTTTTGT GAATCTATTG TGAGAAATAG GGAATCTATT TCTCTATGGT 001520 001521 TTTTTAGTAG TGTGGGCCAA ACTGTGTCTC TTCTCCCCAA AGTTAACGTG CTGAAACACT AACCTTCAGT ACTTCAGAAT 001600 001601 GTGATATTAC TGGGAACAGG GCCTTTAAAG AGGCAATTAA GTGAAAATGA GGCAATGAAG GTGGGCCCTA ATTTAATTTT 001680 001681 AATGGTGTTC TCATATACAG GGGAAAATCT GGGTGCTCGG AAAGACACCA GAAGCACACA GAAGAAGATC ATATGAAGAC 001760 001761 ACAACAAGAA GGTGACTAGC TGCAAGCCAA GAAGAGAAGC CTCAGAAGAA ATCAAACGTA CTAGCACCTT GATCTTGGAA 001840 001841 TTCCAGTCTC CAAAGCTGCG AGAAAATAAA ATTCTGTTGC TTAAGCTGCC AAGACTATGG TATTTTCTTA TGGCAATCTT 001920 001921 AGCAAAATAA CCCTATTAGC AAACAAATGC ATACAAAATC TCTGTAAATA CAGCAGGTTT CCTTTTTAAA AAAACTCTTT 002000 002001 ATTTTGAAAA ATTATAGTTC TACAACAAAT AATAAAAAAG ATATACAGGA TGGTCCTATT TACTCTTGAC TCAGTTTCCC 002080 002081 TTATAGTAAC ATCTTATATA ACTACTAGGA AAATGATGTT GATACATTCC ACATATCTTG TTAAAATTTA ACCAGTTTTA 002160 002161 CATGTATTAG TTTGTTCTAT GCAATTTTCT TGCATGTGTA GACCCATGTT ACCACTACCA TAGAGAAAAT CCAGAATCAT 002240 002241 TCCATCACCA GAGGCTCCTT CATGCTGTCT CTTTATACTC ATTCTTACCT CTTTCTCTAG CTCATCCCTA ACCCCTCACA 002320 002321 ACCATTAATC TGTTCTCCAT CTCTACAACC CTGTTATTTC AAGAATGCCA TATAATGAGA ATCAAAATTA AGTGAACTTT 002400 002401 TGGGACTATT TTCACTCAGA ATAATTCTCT TGAAATTCAG CCAAGTTATT GTGTGCAACA ATAACTCATT CCTTCTTATT 002480 002481 GCGGAGTAGT AGTCCATGAT ATGGATGCAC TACAGGTTCC TTAACCACTT ACTAGGATAT TACAGTTGTT TACAGTTTGA 002560 002561 AGCTATTATG ACTAAAGCTG ACGCTCACAT TTATATATAA GTTTTTATAC AGAAATATGT CTCCATTTCT CTGGAAAAAA 002640 002641 AATCCCAAGG GTACAATTGC CGAGTCAAAT GTTAAGTGAA TGTTTACTTT AAAAGTGTTA TATTGTTTTT TAGAGTGGGT 002720 002721 GTACCATTTT ACATTACCAT CAGCAATGTA TAAGAGGTCC TGTTTCTCAG TATCAGGCAA TAGATAATGT ATGTGCCATG 002800 002801 TATACGTTTC CAGAACATGA AAGTATAGGA ATCTTCTTTT ATTTTATTAT GTTAGCATAC CCTTCACACT CAAACCTAGC 002880 002881 TGTGTGCTGA AAAGGTGATT CTCTGGAATT TAAGGAACTT AAAACCCCTG ATTTATAGCA ACTGCATATT TTCCAGTTGT 002960 002961 GGCTATTTCC CACCGTGGTT TTCAAACTAC CCACATGACT TAATTGAAAG TGAATTAAGG AAAAAAATAC TCACAAGTAG 003040 003041 TTCTCACACA GTTCTCACTG GCACAAGCCA GTTCCAGCAC ACTGCTGCAC ATACACAAAC ATATGCACAC ATGCATACAC 003120 003121 ACATATATAC ACACATGCAT ATTCACAGAC ACATAAAAAC ACAGATGCAT AGAGACACCA GATTTATCTC CTTCATTCGT 003200 003201 ACAGATGGAC CATTAAATAA GATGACAAGA TGAATTTAAT AGCATGACAT AATCAAATAT AGAGACAGAT ATAAAATACA 003280 003281 TAGAGTATGA AACTATGAAA CAATTTTGGA AATAAAAGTG TATATTAATG TGCAAATATA TGTATAGAAT ATGAGACTGA 003360 003361 AAACACCAAA ATGTTGATAC TGTTTATTTC TGGGTAGTTG GATGACAAGT GAATTTAGTT TTTCTGATTG TGCTTTTCTT 003440 003441 TATCTTTAAG GAACATGTTT TCTTTTAATC AGAAAGAAAT AATTACATAT ATATGTAATT AACATATATT GTATAATATA 003520 003521 TATCACATAT ATTCCACATA TATGGAATAT ATATTGTGTT TTAAAGTTTA AAATGTGAGG AGACCACGTC AATGAGGAAC 003600 003601 TTGGAACCAA GTAAAACATG GATGGATATG TGACAATATT GTGGAATAGA GTGAAAATTC AGCTCAGAAA TAGTGAAGCT 003680 003681 TATTTTAAAT GGAAACTAAA ATAAGATCAT GTGGATTAAA TTAGAGATAT TTCCAGGAGA AGATATGTTT GAGCATAACT 003760 003761 TTCCTCTCCT CCCTATCTGA GGAAAATTCT GGAAGAGACT TCATACGTAT CTATATTTGT ATCTATGTCA GAAAAGGAGA 003840 003841 GAAGTAAGGC CTGGGAGGCA GCTTGCTGTT GTGAAAGGAA AATGAAGTCA GATGATCCTT AATTTGGATA CTCTTTCTTA 003920 003921 CCATTTGGGG CAAGTTACTT CCTCAAAGCC TCAATTTCTT CTTCTCTAGC ATGAGATTAA TATTTGTGAT TCATCAGAAG 004000 004001 GTTAAACAAA GCAATTTTTA CAAAGTAAAA AGCAAATTTT ACAAAGAAGG CTTTCATTTT GTTCTGTCCT ATTTTATTCT 004080 004081 AAATTATGGT ATGTTACCCA AATCCCAGTG GGAGCTTTTG TGAGTGAATG ACATTAAAAA ATTACTGGAA CAGGAAATAT 004160 004161 TTCCCTTTAA TGAACTAGAT GAGATTTTTT AAAAAAAAAC CACTAATTAT GTATTTTACA TTATGGAAAC AGAGATTATA 004240 004241 TAATGATAAA AAGATGTGTA TTATATTTTA AAAAATAGTT ACAAAAAGTA AATCTTTTGT TTTCATGTGA

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