Lnc-TBC1D16-1:2

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID	lnc-TBC1D16-1:2
Source	LNCipedia2.1
Same with	NONHSAT056321
Classification	intergenic
Length	5111 nt
Genomic location	chr17-:77889984..77900524
Exon number	5
Exons	77889984..77893635,77895203..77895425,77895749..77895901,77898813..77898870,77899500..77900524
Genome context
Sequence	000001 GGGGTGGACA GGCAGCGTCT GTGGGAGAAC CAGCATCACT AAAGCAGACA ATGTGGGAGG CCCTCACCCG GGAGTCCCTC 000080 000081 GGGGAAGGGC AGCTGCTTCA GGAAGGAGGC CGGAGGGTCC CCTCAGTGCA GGAAGCCAGC TCAGCCGCCC CAGGCCCAGA 000160 000161 TGGGGAGGGG GCGAGGTGGG GGATATGGAG CCGGGCCCCC TTGCAAGGAG CCCTGTGCAG ATGCATGCAA GGACAGGGGC 000240 000241 TGGCCAGCCC CAAAGCCCAG CTGTGTGGCC TGGGGCTGCT CTGGAGGGGC TGCTAGCTTA GCTATCTCGG GGCCTTGAAC 000320 000321 TTTCTATTCT GTTTTGCAAT CAGTTCAGAA GGCGGCATTG CTAGATTCCC TTCTTATCAC AGAGAAACTT CTAGCACAAC 000400 000401 AATAGCTGAT TGTACTGCTC TCTGGGGTGC GGCTGCATTC CTGGACACCC CCCACGTTTT TTTTTTTTTT TCGTGGTATC 000480 000481 TTTGGAACTA TAATGGATCT CATTGTGATT GGTCTGTTCA GGGGACAGTG TGGCCCTTGA ATTTAGAAGC GTGAAAGGGT 000560 000561 AGTGGGGGCT GGGGAGAGGG TGGCAAAGGA GAGTGGGGGT GGGAGGGAAC CCAGAGACAA CCCGTGAGAC AGCCAAGGGA 000640 000641 CATCTCAGAG CATCTCGGCG GCGTCCTGTT GCATAACGCA CCTGGAAACT GCATCCCCTG GACTGGCTGG GTTTGAAAAT 000720 000721 ATGTAGTTAT TTGTCAAACC ACCAATGTTT ATTTTCATTC AGTTATTAAG AAATAAAAAG GGGTAGATAA TTTTCACTCC 000800 000801 CTGCCTGTGC CTGTCCGGCA GGACTCGGCA GCAGGTCGAT CCGGCGCAGA CTCATCTGAG TGCGACGTAG CGGCAGCCAG 000880 000881 TCACATCGTG TCCTCCGGAG GCCGCCTGCT GCTGCGCGGA GCCAGCGTCC AGGACCTGGG GCCGGGGGAC CAGAGCTGGG 000960 000961 ACAGGCCCAG CCCCTGGGCG GCATAGCTAT GTGGCCCCGG GAACACTGGC TCTCCAAGGC ACAAGGCGTT TTCACCGGCT 001040 001041 GCGTCCCATT CAGTCTTCCC AGCATGATCC CAGCTCGGAG AAGCTGAGGC AATAAAAGTG AATTGATTCA GAGAGAACGA 001120 001121 GGATGAGATT TGCGTTGGGC AAGGAGCAGT GCATAAACGC CAGTGATGTC AGCACAGCCG CCCCCAGCCC CAACTCCTGG 001200 001201 GCTACAGGAG GGCAAGCCCC GGAGAAGCCG GGCAGGAGTG AGAAAGCCGA GGCCCAGAGA GGTCAAGGAA CCTGCTCAAG 001280 001281 GTCACGCAGC TGGGACGTGG TCAAGCCCCA CTGAGTCCCT CTGAAGCCAG GCTGGGGCCT CCAGTGAGTG GGGAAAGCCT 001360 001361 AGAGGGGGTG CCGCAGAGCA CGCACAGGAT CCACCAGACG CCCTCGGAGG CCCTGCGGAA AGGCCAAGGG TTCTGAGAGC 001440 001441 TCAACTCGGA CCTTGGCAGG GGCCCAGGAG GACGACAGGA CAACCCCCAG GCTCCTCCCT GCCTCGGTGA CCCTCCCCAC 001520 001521 CCCACCCCAC CAACGTCTGA GCAAGACTTG CTGGAGCCAA TGCAGGAGAG AAAGCTGCTG TTGCTACCGC CAGCCCAGCT 001600 001601 CAGCTCCAAC CTTCCTGGCT GTTGGCCTGC GAGGGCCCCG GGAGGATAGA AAGGGACATA TTTCAAGGGA GAAGGGACGT 001680 001681 TTCCTTACAG GGAAACAAGC TGAGTGGTCC GTAACATACC TGAGGCGTTA TTGCGAGGGA CAGGCAGAGC TGGACTGGGG 001760 001761 ACCCAGGCTG CTTGACATCC GGTGAGGGCC GCTCCTCCCT CTGCCCACTC GGTGACTAGC TTGCTGGGTA GCACCGGGCA 001840 001841 AGGCTGTCTC CCTCTCTGAC TGCTCACTCC CAGCTGTAGA GAGAGGTGGT TCCTGGATCA CGGAGCAGTG CCTGCCTAGG 001920 001921 GTGCAGGCCT GGGCTCGGCA CAGGGCCGAG AAGCTGCTGC TCTGCCCCGC CTCCGGGAGA GGTCCTGGCA CTGCCAGCCC 002000 002001 ATGAATAAGG CCTGGCAGGG CGCCGGGCGA GGGTGTGCAG AGGTCAGCGG GGAGGGCCGA GTGGCAGCGT TCTTGGGACT 002080 002081 GGCTGCCAGC TGCAGCTGGA CCTGTTTGCC TGGGCTGGGC TGTCTCACTT CCCCTGGAGC GGAGAGAACA CTGGGGAGGA 002160 002161 AGATCAGGCG TGGGCAGTGC TTCAGGGGCC CTTGAACTCC AGGATGGCCA GCTCCTGCCA CAGGGGACCC AGCCAGCCGT 002240 002241 GGCCAGAAGC CAGGGAGCCA CATGCTGGAG CCGAGGACAG GCTGTCGTGA GATCAGTTCC AGCCCCTAGC CCCCTTTCCC 002320 002321 TGCAGGCCTG GCCTGGGGGG CTAGCACAGG CTGCCAGGGG AGGTCTCTTG CCCTGTGTGA CAGGGGGTCC CAGCCTGTGG 002400 002401 CCTGCAGCCA TCGACACCAC AACAAGATCC TTGCTGGGGT GTTCTGCAAA ACCTCAGGAA CCCTGTGCCC ACAAACACTG 002480 002481 CGTGAAAGTC ACCAAGTAAC CCTTCTGTGA TTATTCATTC ATCTGAGGTT TGCTCAGCAA CTTTCAGTCA TCTCAATCCT 002560 002561 GTTGCGATGA AATGCAAAGT CCTCTGACAG CGTTGTGGGA TTGGGAGTAA GTGTTGCCTT TAGCAGGTAC CAAAAGTGCT 002640 002641 ACTGTTATCT CAAGCAGGTG TGTGACTTTC TATGACTTTA AAAGGGACCC TCCCAACTTC TGGGAAGCCA GCCCCCTCTG 002720 002721 ATCTAGCCAA TGTACCCACC ACTACCCATA TTTGCCTCTC TCCCTGGCAC CCAAGACTGG TGGAAGAGGA AAGCCCTCTT 002800 002801 GTAGAGACAG CCCCACTTGT CCTGATGGAG GCCATGGCTC ATCCCCTCAC CACATGGCCT CACTGGGCTG GACCCTGGTG 002880 002881 CATGGCTTGG GAAGGGAGGG GCAGCTCAGG ACCTGAGACA GCACAGGCCG ACCACCCCGT AAGGATGGGA AGGAAGTCAG 002960 002961 GAGTCCATGC AGTGGCACAG GCCAGGGAGG GTGGACGTTG GGAGGGGGAA TGGAGGCTTG GCCTGTGCTG AAGGAGAGGG 003040 003041 GTGGAGGCGG GCATTGGGGT GGACCATGCT CTAGTGGGGA GGTCTGGCCA GAGCAAGCAG GTAGATGCAG TCACGGGGAG 003120 003121 TCCAGTGAGG CGGACAGCCC TTCGCCCTCA TCCGGTGCTC AGTGGTGGGG TGCAGTGCGA GCTTCCACCT TCATCTGTCC 003200 003201 CCCACACACC ACCACAGCCA CAGACCACAT TGCCCTGCCC TGGATGCAGG AGGACACCTG CACCTCACAA GCCAGCTTGG 003280 003281 ACAAAACCAA ACTAGAAAAA CGAAATGCCA GGGTCACTAC TGTGCCTTCC ACCGAGGAGG TGACGCGATG TGTGGATGGC 003360 003361 GGCTTGCCTC TGTGTCTGTG CAGGGTGGGT GTGTTTGTGT GTACACCATC CACAGGCAGG TGCTCGGTGT GCAGTACATG 003440 003441 CACACACACA CACATGCACA CACGCACACA CATGCACACA CACGCACACA CAGACATGTA CACACACATG CACACACATA 003520 003521 TGCGCACACA CACACGTACA CACACAGAGG ACAACATTTG GGTCAATGTC TTGCTGGGGT CTATTGGTAA CACACTAAGC 003600 003601 ACTTTGCAAG GGAAGGAACT TTCCAGGGAC CCTGAGCAGT GTCCAGTGGA GAGGCTGTCA TCTCTGCCCC ACAGCCGGAA 003680 003681 GTGGCACCTC CCCACCCTTG TGCACAAGAG GCAAATGGAC ACAGGCTCCC TGAGGCCCCA CACTTCCCAC AGACACCCCC 003760 003761 CTTCCCTCAC AGTCCTGGGT AGCTGGCATT TTGGGCCAAT CCACAGTGGC TTTAGTGGTT GACCATGGCT GAGAATATTT 003840 003841 TGGGAACTGC CTTTTAGAAT CCGTTGACAA GACACACAGA CGCTGCTGTC CCGGTACTTT GCAGCCTTAT CCAGGTTCAC 003920 003921 GTTGGTTTTC TCTGGATTGG GCAGTAACTC CTCCTTCCCA GGGGATGGTC ATCTTTGTGA CCCCACCCGG GTGGCTCTTT 004000 004001 CCGACCATCC TCTCCATCAT GGGAGAATCA TGGTTTCCCA CCAGAAAGGC CACCCTGGTC ACATGTGCTG GGATCTGGGA 004080 004081 GAGGAGTTCC TGATGCAACC CTGGTGTCGG CGGGGCCACG GCACCACACA GGAAGGCCAA GCCAGCTGGA GAGGCCACAG 004160 004161 TCCTGAGGTG TGTGTCACCC CGATGTTTGT GGAGCCCCTT ACAGCCAATG CTGGCAGTGC TGGGAACGCC CATGTGGAAA 004240 004241 AAGGAGATGA GTTCCTGTCC TTGGGGAAGA GCTCATGGCT GTGTTCTTCT TGGGGAGCAC CGTGGCCGGG GAGAGGAATA 004320 004321 CAAATTCTCT CTCACCTTTT ATAACCCCTC CTTCAGGCCT TACGGTGAGG ACCCATCCAA AGCAGAACCA TGCCCAAAAC 004400 004401 AAGATACCAA CAAGGAAGCA TGGTGTAAGC ACAGCTCACC GACAGCCGTT TCATATGGGG CTTCAGAACA CCCAAGAGAG 004480 004481 CTTTGTGTGA CTCCATTGAC TTGAGGTGTC CAGAATGGGC CAATCCATAG AGATAGGAAG CCGATTTGTG GTTTGCCCAG 004560 004561 GGGCGGCGGC AGGAGGGGAA TGGGAGGCAA TGTCTCATGG GTGCAGGCTT TCTTTGAGGG TAGATGAAAG TGCTCCAGAA 004640 004641 TTAGATTATA GTGATGCTTG CACAACTAGA AATTTACTAA AAACTATTTA ACTGTATACT TTCAATGGGA GAATTTATGG 004720 004721 TATGTTAATT ATATGTCAAT AGAGCTGTTA AATATTTGAA GTATCATGGG GAAATGGCGC TGAAGGTATT CATCGGTATG 004800 004801 TACTTTCTGA TTTCATTGTT TAAAAAAATA TGTGCTCATA TATAGTAGAA AGACTAGAAG GAAACACATC GAACGTTAAC 004880 004881 GGTGGCTTTG TCTGAGTAAA GGAACAAGAG AATGTTTTAT TCTGCACGTG CAAACAGCCA GGGGGCAGGA TCCGTCTAAA 004960 004961 GTTGGGGTGA TGCTGCCATC CTACAGCCCA GCCTCTGGAC CAGCCCCTCC CTGCCCAAGG TGACCTGTGA CTCAGCTGCA 005040 005041 GCGGCATCCA GCGGCCAGGG GTCAGCCCCT CCCTGGGAAG GGAATGCTGT GGGCCTGCAG GGCGGGCAGG T

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