Lnc-TPRA1-1:2

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID	lnc-TPRA1-1:2
Source	LNCipedia2.1
Same with	NONHSAT091729
Classification	intergenic
Length	4796 nt
Genomic location	chr3-:127247211..127257825
Exon number	6
Exons	127247211..127247552,127251228..127251286,127251642..127251756,127252420..127252612,127252960..127253249,127254029..127257825
Genome context
Sequence	000001 GCAATTTTCA GCAGTTTCCC GACCTGGGAG GCAACAGTAA CATCCTACTT CCCTGAAAGC TGGCAGTAAA CTCCAAGTCC 000080 000081 CAACTTTTGA TGTTCCAGCC CTTCCAATGG TTGTATAAAC CCCTGACTCC CTGCCCTAAA CCTTTTTCCA TTGGGGGCCT 000160 000161 CGTAAGGTGG CACCTAGCCC CACTAACACG GCATGTGTGT GTGTGTGTGC ACCTGCACCT GCACCTGCAC CTGCACAGGA 000240 000241 GTCAGCTAGA AAGCACAAAG GCGAATGTGT CACTCCTGTG GCATGGGACC ATGAATGGCC TCTGTTTGCC CTCTAGTTCT 000320 000321 CTGGCTGGGA ACTCAGAGAT GTCCCTCCCT GTCCAATCTC ATCTCCTGCC ACTCCCCATA CTTCCTCCCC AGCAGCTCCG 000400 000401 CTCCAGGACA TTGATAACTG TGAATAGAAG ACAGTCGTTG GGAGATTTCA CCGCAATCTG AATGACCACT CACTTTTTAT 000480 000481 CTCCACACAA GACTGTGAGC CCCTTGAGGA TGGAGGCTCA GTTGCATTTT TCTTGGTACC ACTAGAAATC AGCATTGAAG 000560 000561 TTGGCAAAAA GTAGGGATCA GGGATTTTTT TTTTCTTAAA TTCATGAGTG AACGCTGTCT CCCTGGTCAA ACTGTTTTCA 000640 000641 GAGGATTGAG ATAAGGAGGC ATTTGTCTGC AGGTTCCCAT CTCCAGAGCA GAGGCTCTGC ATGATGTCTT CAAAGCCAGA 000720 000721 TTGGATCCCT ACCCCGGTCT GGAGTGTGAG CTAGAGCCTC GGCCCTCACC AGCATATGCT ATAGCAAGGG CTCTGGGCAG 000800 000801 GGAGGCATCA AACCCCAGGT GCTCAGGGGG ACTCTGCTCC CCTCCATTTT TTCTAGAAAT GTACCAGGAC CCCTTCCCTG 000880 000881 TGCTGGGTGC TAAGGATACA GCAGCAAACA AAATAGGCTG TCCCTCTGTC TTCACGGGCA CAATATTCAG CCAGGCTCTT 000960 000961 TGCCTCAGTG TCCCCAAGTG TTAATTGGAG ACAGTAGCTC TTATATTGTG TGGTTGCTGC AAGGGTAAAA TGAGTTAGAA 001040 001041 GACATCAAGG GCTTAGAACG GTGCCTGGCA CATAGTAAGT GCTAAATGAA TCTGGCTATT ATTAGATCAT GGAGCTTATT 001120 001121 ATTAGATCAC GGGTGAGTCA GAGGATAGAC AATCAGGGAG TAACTAGGAC CATCTTAGAG TGAGCTAAGT GCCTCAGGCG 001200 001201 AGATAATGCA GAGGTGGGGG ACAGAGTGGG TGGGGAGGGG AGCCGCCATA CAGTGGCCAG GACCAGCTTT GCCCAAGTGG 001280 001281 TGGCAACCGC ATGACCACAG GAACGATGGC GTGAGCCCCG TGGCAACCTG GAGGAAGGGT GTGCTGGGCA GGGGAGGGCG 001360 001361 GTGCAAAGAC CCCAAGAAAG AGAGTCTGGC CCATTGGCCA GCACGGCTGG AGTGTGGGGA CAGGGCAGGG GTGTGCGGGG 001440 001441 GAGACTGGAG TCCCAGGAGA GGCCAGGTTG CAGGGCATTG AGGGCCAGAG GAGGCACCTG GGCCTGTTCC ATTCCCAACC 001520 001521 CTCAGGATGG CCCACCCATT ACCCACAGCT GCACGTGAAC GTCCTTTGGC GCTGGCCTCC AGGGTGGGGA AACCAGGTTC 001600 001601 CTGCAGAGAG GGGCAGATCT GAGTGTCCCC CGCCCTCGCC TGGGTGCACT CAGGGTCAGG CCTGGTGCCC GCAGAGTCCA 001680 001681 TCCCATGCCT CATTACCCCC GGCTGGCTGA GGCCCACCCT GGGCTCCTGG TGGGTGGGGG CACTTCTGTG AGCTCCACCA 001760 001761 CTGTGTCTGT GAGCCCAACC CCGACCAGCC CCCTCCAGCT TCTGGGGCCT GCAAGGAGGA GGAAGGCCAG GGTAGAGGGA 001840 001841 ATGGAGAGAG ACTGTTCCAT GCAGAGGGGT GAGCCACCTT CTGCGGTGGA GGCCAGGAGC AAGGATATGC TCTGAGCCTG 001920 001921 GTCTGGGGCC CCTCCCCCAC TTCCCACCTC CCAGCTCTTC CCTCCTAGAG ACACCTTCTT TGTCTGCAGA GGCCACTGCT 002000 002001 TTGATTCTGT TGTTGCTAGG TGATGGGAAC TGGGGGGAGC AAAGAGTGGG GAACTGGGCA GGGTCTGGCG GGGCTGTGGT 002080 002081 GGGGGAAGCT GAAGCATGAA GGCTCGAGGA GCACACAGAC ACCTACACAC AGCTCCGCGG GCATGTGGGG ACCCAGACCC 002160 002161 ACCCCCACAG CAGACACCCC CACAGAGCAC TCATGGCCCC CACAGAAATA CACCCACACT CATCACAGCA AACCAAAACA 002240 002241 ATCACACGCC GGTACACAAA CACACACACC CCCGCACCAA TCCAGGCAGA CACAAAGCTC ACGGCGACAG GCAGATCTGA 002320 002321 TTCACACAGA CACAGGCACA GGTGCTTCCT GATGCCACCC TCTCTTGGTC ACGTGCCAGC ACTTGGAGGG AGGAAAGTGC 002400 002401 CTCACCAGGC TGAGATGCCC AAGGGACCCC CCAGGGAGGG AAAGCAGGAC ACACTGGGAC AGTTGCTTCC AGCCCTGTCC 002480 002481 ACACCCTTGT GCCCATCAGG TATGCCGCTC ACCCCCACCC CACCTGGACC TTGGTGTCAC CTAGGATTGC AGAGGCCGCC 002560 002561 TTCAGCCCAG AGCCTGGGGC CTTGCCCACT GCCTCACCTC CCAGGATAGG GCATGCTGTT CCTTTCTCCT TCCCTTTCTT 002640 002641 TGCTCTTGTG TGCCTGCCTT TAGCAAACGC CCACTGGGTG TGTGGGTACA CTGCGGCCTT TAAAGAGAAG AGAAACACAT 002720 002721 GAGGCTTACA GCAGGAGGCC CTGCCTAGGT TCCAAGGGAC ATGGAGCAGG GTGGCTGTGT AGAGCTGGGG AGCATCCCAA 002800 002801 GCCTGTGCCA AGGTTCCAAG GACAAAAAGG GCAAGGAGGC CCAGTGCGGG GTGGTGGGGG AGCAGCTAGC CAGGGCCAAC 002880 002881 AGTGAGCCTC GCGCCTGGGC AGGTGTAGCC TTTAAACGCG GTGGGGGAAC CATGGACAGC ATCTAAGCAG GGACGTGCCG 002960 002961 TGAGTCCTGG GGGTGCAGGG GTGTCTAGAG GGGAAGCTGG GAAGCAGGGG TCACAGCTTT CCGACTGGTG GCTGAGTGTG 003040 003041 GGGAAGACAG GAGGGGCAGG TGTGAGATGT ACAGCAGACA CAGCTGTGTG CTGGGGCATG GTGGGCTGTG GTGAGAGAGA 003120 003121 GGAGCAGGTC TTCTCCCCGC GTGTTCAGAG CAGATCCAAA CTCTTCTCCC ATTCCTTCCT CCACCGTGCA TCCTCAGCAC 003200 003201 CCCTCAGCAC TGGCCTGTGT GGGCAGCGTG AGCACAGAGA GCAGGAGCTT GCCCTCAGAG GCTTCAGGGG GTCGCTTGTA 003280 003281 CCCAGTGGTA TGGTCAGCAT CATGTTTGAC CAAAGGGAGG AAGGTGGCTG TGACCAGAGC GAGGGGGGGT CCTGATGCAG 003360 003361 CTGGGGAGTC AGGCTCGAGT GCATGCTGTG CATGTTCTCT GCCTCTCTTC CTGGGGGGCA GGCGAGTCTC CAGAGCCTGG 003440 003441 AGGACAAGTT AGCCTTGCGA AGGATAGCAG AGGACCCAGC CCAGGGGTCC CCAAAATGGA GCACCAACCC TCCATGCAGG 003520 003521 CCAAGCCACT GGTGAATATG CTGCAAAAAA TATGCTGGAA CTTCTATGAA TACCACAGGG TGTGAGAAGA AAACATTAGA 003600 003601 ACTTCTATTT TGTACCTGTG TTACTCCACA ACAAGAAAGC AATCAGCTTG ATCAATGCCT ACTGTAAAGA CGGCACCGCC 003680 003681 CTCCGGAGGT CCTTTCTCAG CCCTGGTGTT CGGACAGCCA CATCCCCTCG CAGCAGGGGG AGGCCTGAAG CATAGAGGGG 003760 003761 CCCATGCAGG TCTATTCTGT TTCAGCGAAT TGCCTGGGAA ATAATCCAGG ATCCATTTCG TGTGGTCATC TTGTCTCCCT 003840 003841 GGTCCCCTCC AGCCTTTCCT CATCTTTTGT GACCTGGTCA CTCTGGAAGG GCGCTGGCCA GTTAGTCCAC AGGATGGGCC 003920 003921 TCCCCTGGGG CTTTTCTGAT GCTTCCTTAT GATGGCACTG GCATCCTGAG GGGGAGGACC ACAGAGAGGA GGTGCTCCTC 004000 004001 ATCACACCAC ATGGGGGTCC ATGCACCAGT GCCACTGCTT TCCAGGGCTC TTCACCTTCA TCACTGGTGG AGGTGGCGTC 004080 004081 TGCCAAGAAG CAGAAAGTTG AGGCTTAGAA GGTGCACGGC CCTACCTCTT CCGAGGTGCC CCTGCGGGCT GTCTACAGAC 004160 004161 CAGGCAGCAC ATGCCTGATA GCAGCTGCAT AAGGAAAAGC AGGAGCCAGC TCGTGCACAG TGGCCTCAAG TGTGCACTGG 004240 004241 GCATGTTCTC TGCCTCACCA TCCCTGTGTG ACAGATGAAG CATGGCAAGC CAGGCTCCAG AGAAGCATCC TGAGGACCAG 004320 004321 TGTTCCTAGG GACCTCATTC TTCTGACCTC ATTCCTACAA CGTTTTGTCA CTGCAAAGGA AATCACCAAG GCCAGCATGA 004400 004401 CAGCCCTCAA CAGAAGCCAA GGCCAAGTCC TCGAACTTCC TAGTCTGCAC AATGACAAGT GAGCTCATGG AAACCTCTCC 004480 004481 ATCGTTGACC AGGATCTATA GGAAAACCCT CCTCTTCTTC TATATGCAAA GGCTGCACAG CTCCTGGTTC ACCTGCACCT 004560 004561 CTCCAGACCA CCATGGTGCC TGCAGCTCTG AGGGCATTTT AAATCATCAC AGAACAACAA GCATATAAGC ATCATGAGCG 004640 004641 CCTCTGGACC TCTGACGTGC CTTGTGGAGG CCTGCCAGGC CCACGTTTTA ATTTACATGA ACTCGATGCC CTTTTTGACA 004720 004721 GGGAGAGATC TGTTTCTTTA TTTGTTAGCC TTTCCCCTGG ACCTGCTAGA TCTGGACCAT CCCCAGGAAA GGAAGG

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