Lnc-TSHZ1-1:1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID	lnc-TSHZ1-1:1
Source	LNCipedia2.1
Same with	NONHSAT059887
Classification	intergenic
Length	5242 nt
Genomic location	chr18+:72877670..72892146
Exon number	3
Exons	72877670..72879331,72879948..72883171,72891791..72892146
Genome context
Sequence	000001 TGAACTGGGG TATCCTGTAT GAGCTGGGGT ATCCTGTATG AGCTGGGTAT CCTTTATGAA CTGGGGTATC CTGTATGAGC 000080 000081 TGGGGTATCC TGCATGAGCT GGATATCGGT TATGAGCTGA GCTATTTTGT ATGAACTGGG GTATCCTGTA TGAGCTGGGG 000160 000161 TATCCTTTAT GAACTGGGGT ATCCTGTATG AGCTAGGGTA TGCTGCATGG GCCTGGTATC CTGTATGAGC TGGGGTACGC 000240 000241 TGTGAGACCT GGGTACCCTG TAAGATCTGG GGTGCCCTCT GCAAGCTAGG GTAACAAATG GACCCGTGTG TGTTCTGAGG 000320 000321 ACTGTAGAGG TTTATCCCTC TCAGGTAAAA ATCCACAGGA ATATTCCAGC CCCACAAGTG GCTCTGCTCC AACGAAGTCA 000400 000401 TTCAAGAAGC AGGCTCTGTC CAAGTTGTGA GATCCTTTTT CTGTCTTTCC CTATGGCAAT GTCTATCTCT GCATGGCCAG 000480 000481 AAGTTTTCAT CAAGAAAGCA GGGAGAGGGT GTGGATGAGA CACATCCATA GGTTAAGAGC TAGGTGTGGC GGTGCATCGG 000560 000561 GCTTCCTCTC CCGTTCCACT GAGGAGTGCG TAGTCACCGA CCACTCCCAG CTGTGGAAAG CAGGCACCGC AGTCCAGATT 000640 000641 TGTGATTGGG AAGAAGGCAG GGCAGATCTG ATGGATCTCT AGCAGTTTCC CCTCAGTAAC CATCTCTCTA GTGCCTAAGA 000720 000721 AATGGTGCCT GATGGTTCAT TCATTGTAGC ATTATTTTTA ATACTAGATT TATTTTAAAT TCAGACTGTG TTATATGTTA 000800 000801 TAATACCTTT ATTTTATACT GGAAGCAAGC GTCAATGTAG GAGAGTCTTG AAACCCAGCA CCAGATAGTG GTTGCTAATC 000880 000881 CCAGTCTTCC ATACAAGGAT CCCGGGTTCT GTGAAGAAAT GCTTAATTCT GGGACTGGGA GGGGAGTAAA CAAGATGAGC 000960 000961 CTGGAGCAGA AAGCAAGGAA GTGTCCAAAC CAAGCCAAAC CAAAACACCC AGGATGCCGC CATAATGGGG ACATTTTAAA 001040 001041 GGGACATAGG AGGCAATGGA AAGAACCCCC AGTGGCTAAA GCTAGAGCAA TTTGAGCAAC AAAGTAAGAT AGCATTGGAA 001120 001121 AATAACTCAA AGTATAGAGC CAGCCTATTC TGATAGAAAT GACTGAGGAA ATAAATAATT GGAGGGAGAG TGACAAGTTT 001200 001201 TCTGTGCAGA CTTCCAAATA ACTTATGTAG ATCCCCTGCC CTTGAAGAGG GGAAGCACAG CTCCCCACTT TGGCCACGTG 001280 001281 GGCTGCTCAT AATGACTTCT TCCAAAAGGT ATGGAAAGGG GTAAGGCAGT TTTACAGTGG AGAAACCTGG CAGACACTGC 001360 001361 TTCAGCCAGG TCATCACGTT TAACCATGCT CGGTTACGTT GACCCGATGC ACCCTTGATG GGATGGGATG AAAGCGCTCG 001440 001441 ACCTCCATCA CAGGTGCAGT CTCCACTCAA CCCACTATGA GAAAAACATC AAACTCCAAT TCTTCAGTGT TCCTGCCGGT 001520 001521 CCTCCTCAGA ACAGCCAAGG TCAAGGTCAT TCAACACAGG AAAGTCTGAG AATCCATCAC CACCAAGAGG AGTCTAAGGA 001600 001601 GAACTGAGGA TTGAGGGCCA TGGGGTGTCC CGGCTGGGGT CCGGGGTAGA GACGGATTTT AGACGATCTG CTGTGCAGAT 001680 001681 CATGAACCGT CGCCGCAGTG CCAGACAGAC TCTTCATCCG GACCGGCCGT CCCACTGGGT CCCCTCAGGA AAGCGCAGAA 001760 001761 GCCGGGGACC CCAAACCGCG TCCAGCTCCT CCCACCCGCC CTTCTCGGAG CCGCGCACTT GGTAACTTGC GTGTGAAGAA 001840 001841 CTCACGGCCG TGTTGCCAGG AAACTGCGGG GAGCAGCCTT TGTGGTCTCA CATATGCGTA ACATAATAAT AAATAACGGT 001920 001921 TAACGTGATA ATAAATAAAC AAATAACAAT AATTATAACG TGCCCCAAGC CTGTTGTTTC TCCAAAATTA ATTTATGATG 002000 002001 AATTACGACT CGAATTCCTC GGAACATACC AGTGGGAAGA GGAGAGGGGG CTATTTTATT TGCCACTGGG CTCAGAGTAG 002080 002081 GGTTAAGAAC TGTCTTTCCC TGAGCCAGAC CTTGTCCCAG GTCCCTGGTA ACCCAGGGAA GGTCGCCAGA GAGGAATTCT 002160 002161 CTCTTTCCCT CTGCTTCTCA CATCTCCTCC TCTGCCTAGG ACAGTGAAGT TTTTTAGATA CTTTACTTGC ATTTCTAATT 002240 002241 CAGTTATTCT TCTGAAATTT ATTCAAAGGA TTTATGCTTA TGAAATTATA ATATAATGCT GCCTATATGC CAATGAGCTG 002320 002321 GAGGCAAAGA AAATAATTTT CTTCAATTTA CAGTTATGAG GCTGGAGGAA AATGATGCCT TCTTATCACC TCTTTCTCTT 002400 002401 TGTATGTCTC GGTATTTTTT TAAGTCTTCA GAAGGCAGGA GCTGATGATG AATTCTTAAG CAGATCACAC TGATAATTGT 002480 002481 ATTTCAGAGC TGTCAGCGCT GGGAAGACTG GCCAGCGACT GTCTCCATGC ACTTGAGCTA TTTGTGTCGC TGCCTTCCTT 002560 002561 CTCAGGAACT CAGCCCTCAA TAAAGCCAAC TCGCTGGGGA TATTGTTAAA TCGTCTGAGA GGATTATTAG ATCGAAGGGA 002640 002641 AATTTATGGA TGACACTTTG TAACAATTAA TCAGGAACTG TTGATGAAGT TTAAGTTGGT TCTTTATTCC TGGACCAAAA 002720 002721 AAATATATAT ATACGTATAT AGATGTGTGT GTATATATAT ATATACACAC ACACATATAT AAAATCATAA TAATATTCAG 002800 002801 CCCTTGTTCC AATTGTCAAA TGGCTCATTT TGTCACTCTG TTTGATTAAT GAACCTTTTG GAGTCCCCCA AAAGTCCTAG 002880 002881 TAATACAAAT AAAGAGAATC ATAAATATTG AATAAGCTCA CAGCACAGTT AACCTTGACT ACATTTTGGG ACATACTTGG 002960 002961 AGAAACTTTG CTATACGGAA AATAAATTGC TGTGGGGATT AAAAAAATAT GCACACCCAT ACCAAATTGG AGATTTTGGA 003040 003041 GAATGTCACC TCTCTGACCT TGTCACTCTT AATAATCTGT TGTGATTAAT TAGTTTAGTT AGCTTTACAA TCAGGTCAGC 003120 003121 AGAGCGCCGG CATGCTGGCG TGTTTTACCG ATGGGTCCCT GCCCAGCCCA GAAAGGGATG CGGGCTGGGG TGAGGGAGGG 003200 003201 TCTGGAGCTA ATGGGGCTGG TGTTCTAACC TCACAAGGTA CTAAACGAGG GTGATGGGTG AGGACGATTT CAGGTCGTAA 003280 003281 TTTACGGAGC AGGGCCCTGG GTGGGGGCAG GGAGCCTTCA TTGTGTGTTG GTTCTTGTGT TGAGTGCACT CACCCTTCTC 003360 003361 AGGCAAAGAT CCCCCCTCAC CAGCTTGGAG CTTTTGCTGA CACCCCTTCA AAGTTCTGAT TCCAGATCTG ACCAGTTATT 003440 003441 TGACCCAGAA AACAGATTCT AACTAGGCTG TAATGACTTG CAATTTTTGA ATGTAGCATC TAGTCCAGGG GTTAAGATTC 003520 003521 CAGGGTAAGA GAGAAGTGGA TTTGAGTTCT CCTCTGCCGT ATCAGAGCCG TGTGGCCCTG GGCGGTTGGC TTTGACTTTC 003600 003601 CGAGTCTCGG TTTCCTTATC TGTAAAATGG AGTTTCTACA TCCTAGGATT TTTACAAGGA TGAAGTGAAA CAATTCAAAG 003680 003681 AAACAGCTTG GCCAAATGTC CAGCATGCAA TACTCTGCAG TGGGTAGGAC TGTGTCGTCC TGCAATAGAA GTTGAAGTCC 003760 003761 TAACCCCTGA GACCTGTGAA GGTGACCACT AGGGTACGCC TTAAGCCAAT GACTGGTGTC CTTATATAAG AATCTGGACA 003840 003841 CAGTCACGGG GAAGACAGCC ACACAAAGCC AGAGGCAGAG ATCGGAAGAT GCAGCTGCAG GCCAAGGACG GCCAGAATTC 003920 003921 ACGGAGCCGA AGCGCCGGAG AAGCCAGGAA GGATCTTCCC ACAGAGCCTT CGGAGGGGCG GGGCCCTGCC GACACCTGGG 004000 004001 TTTTGGATTT CTAGTCTCTA GGACTGTGAG AATACATTTC CGCCGCTTCC AGCCATGTTT TCCGTCATTT GTGAAGGCAG 004080 004081 CCTTTGGAAA CTGATACGTG CTGTAGGGTC ACTGTGATCT GGTTTGCAGG GAACAAGTAA GGTGGGGCTG AGGACTTGGC 004160 004161 CTGATGTGCC TGGCACTCGG TTTCTTGCTC CCCCTGAATA GTCCTGATCA TGCCAGCTGC CGCCCCACGC AGGCTGAGCG 004240 004241 CCGCGAAGGC CGGGATGCCG CTTCTCGCGT ATGGGTGAGG AGCCGTGGTT CGTTCAGTTC AGCAGAGCGC CATCGCCGCC 004320 004321 CCTGAAGTCC AGCTCTTAGG ATCAGCGCTC AGAACCCCAG ACTCTGTGAC GTCGTTGTAG ATGCAAAGTT GTCTCTGGTA 004400 004401 CAGGCCAAAG TGATTCATTT CATGGTATTG ATTTATGTTG CCTTTTCTAA AAGTACAGTT ATTTCTAAAT AAAGACAACA 004480 004481 TTTAAAAGTT AAGAAGTAAA TTACAATAAC GTTACTTAAA TTATCAGCTT AAAAATAAGG AACCTCACAT TACATAGCAA 004560 004561 ATATATCCTC GGAAAGTTGC AAGCGAGTGC ATTTTTTGTA CGTAATGTCT TATTTTCCTG TTGACTTATA ATGAGAAATT 004640 004641 CAAAAAATCT ATTTCCTCCC AAAGAACAAT ATTGGCCCCA TTACACTAAA AATTACACTG GATCCTGCCA TTTCCTTTGT 004720 004721 CATTGTGGAA CCAACATGTT CCAGCCGTGA CGTAATCCTT CCAATTCCTG GCTCCCGCTC TCCTCCAAGA CTTTCCCGCA 004800 004801 GGTCATTGCA GATCGCCACC TTCTGCCAAA GGTTTTCACC GACTCTCTGG TCCGACGAGG AACGCTGCTG AGCCTGACTC 004880 004881 TAGCAGGAGG AATATGAGCC ACAATTGTAT GAAAATCTTT CCTGGACACC TTCGGATAAG ATGAAATAAA CTTGGAGAAT 004960 004961 GGCATCTGTG TTGGAAGAAA GTTCTGGACT CCACAGTGGC TTGCTCCAGA AAAGCCAAAC CATCAGCTCT CTTGACAGCA 005040 005041 CAGAGAATGC CAGTGTGTGG GAAACAGACC GCGGTCACCC TGAGCGGCAA GGGGCTTTCC AGTGCTTAGG CTCTGAATGT 005120 005121 GAAACATTTT AGAAAGAGAT GAAACAATTT TTTTCGCTTG TATTTTCCTA TGTGTTTGAA GGTCGATAGA TGATAAAAAT 005200 005201 GTGTCTGAAT AAGTCTGATT TAGTCTCAAA GATCTCTTTC AA

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