Lnc-XPC-5:2

Same as ENST00000273083.3

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID	ENST00000273083.3
Source	Gencode19
Same with	lnc-XPC-5:2
Classification	antisense,sense
Length	7751 nt
Genomic location	chr3-:14530619..14581881
Exon number	24
Exons	14530619..14535334,14536351..14536497,14537925..14538068,14545074..14545179, 14547123..14547297,14548309..14548488,14549069..14549208,14551328..14551472, 14552673..14552818,14552921..14552987,14554285..14554365,14555173..14555318, 14555800..14555986,14558572..14558721,14559280..14559405,14561618..14561786, 14561897..14562044,14563149..14563294,14564507..14564582,14565119..14565205, 14565900..14566045,14566944..14567079,14567358..14567438,14581776..14581881
Genome context
Sequence	000001 GGAGGGAGGG CCAAGCAGCG TGGCTCCCGA GGGAGTTGGT GGGCAGCAGG GGAGACAATA GCGAACATGC TGTGTGGGCT 000080 000081 CAGCCGGGAG ACCCCTGGAG AGGCGGACGA TGGGCCCTAC TCCAAAGGAG GCAAGGACGC AGGAGGGGCC GACGTTTCCC 000160 000161 TGGCGTGCCG CAGACAGAGC ATTCCAGAGG AGTTCCGAGG GATCACTGTG GTGGAGCTGA TCAAGAAAGA AGGCAGCACG 000240 000241 CTGGGCCTGA CTATCTCAGG TGGCACCGAC AAGGATGGAA AGCCCAGGGT CTCCAACCTG AGACCTGGGG GACTTGCAGC 000320 000321 CAGGAGTGAT CTGCTGAACA TTGGTGACTA TATTCGGTCT GTGAACGGGA TCCACCTGAC CAGGCTCCGC CACGATGAGA 000400 000401 TCATCACCCT GCTCAAGAAT GTGGGCGAGC GCGTGGTGCT GGAGGTGGAG TATGAGCTGC CCCCGCCCGC TCCTGAGAAT 000480 000481 AACCCCAGGA TCATTTCAAA GACAGTGGAC GTCTCCCTCT ACAAGGAGGG CAATAGCTTT GGCTTTGTCC TTAGAGGAGG 000560 000561 TGCCCATGAA GATGGGCACA AGTCCCGCCC GCTTGTCCTG ACCTACGTGC GGCCCGGTGG CCCTGCCGAC AGGGAGGGCT 000640 000641 CCCTGAAGGT GGGCGACAGG CTGCTCAGTG TCGATGGAAT CCCGCTGCAC GGGGCCAGCC ATGCCACCGC CCTGGCCACC 000720 000721 CTGCGGCAGT GCAGCCACGA GGCACTCTTT CAGGTGGAGT ATGATGTGGC CACCCCTGAC ACGGTGGCTA ATGCTTCGGG 000800 000801 ACCCTTGATG GTGGAAATAG TCAAGACGCC AGGGTCTGCC CTGGGGATCT CGCTCACCAC CACCTCCCTC CGGAACAAGT 000880 000881 CAGTCATTAC CATCGACCGC ATCAAGCCAG CCAGCGTGGT GGACAGGAGC GGAGCCCTGC ACCCTGGAGA CCACATCCTG 000960 000961 TCCATCGATG GCACCAGCAT GGAACACTGC TCGCTGCTTG AGGCCACCAA GCTCCTGGCC AGCATTTCAG AGAAGGTGCG 001040 001041 GCTGGAGATC CTGCCTGTGC CCCAGAGTCA GCGGCCACTG AGGCCTCAGA GGCAGTGAAA GTGCAGAGGA GTGAGCAGCT 001120 001121 GCACCGCTGG GACCCCTGCG TGCCCTCCTG CCACAGCCCC CGGCCCGGCC ACTGCAGGAT GCCCACCTGG GCCACACCTG 001200 001201 CTGGCCAGGA CCAAAGCCGA TCCTTGTCTT CAACTCCCTT TTCCTCGCCG ACCTTGAACC ACGCCTTTTC CTGCAACAAC 001280 001281 CCCAGCACCC TTCCCCGTGG ATCCCAGCCC ATGAGTCCTC GAACTACAAT GGGGCGGAGG AGGCAGCGAA GAAGGGAACA 001360 001361 CAAGAGCTCG TTGTCGCTAG CCTCCAGCAC GGTGGGGCCG GGCGGGCAGA TTGTGCACAC GGAGACCACG GAGGTCGTGC 001440 001441 TCTGTGGAGA CCCCCTCAGC GGCTTTGGCC TCCAGCTCCA GGGCGGCATC TTCGCCACCG AGACCCTGTC CTCCCCACCC 001520 001521 CTCGTGTGCT TCATCGAGCC TGACAGTCCG GCTGAGAGGT GTGGGCTGCT GCAGGTGGGG GACCGTGTCC TGTCCATCAA 001600 001601 TGGCATTGCC ACCGAGGACG GGACTATGGA GGAAGCCAAC CAGCTCCTGC GGGACGCCGC ACTGGCCCAC AAGGTCGTGC 001680 001681 TGGAGGTGGA GTTCGATGTG GCGGAGTCCG TCATCCCAAG CAGTGGCACC TTCCACGTGA AGCTGCCCAA GAAGCGCAGC 001760 001761 GTGGAGCTGG GCATCACCAT CAGCTCGGCC AGCAGGAAAC GAGGGGAGCC CTTGATCATC TCCGACATCA AGAAAGGCAG 001840 001841 CGTGGCACAC AGGACGGGCA CCCTGGAGCC AGGCGACAAG CTACTGGCCA TTGACAATAT CCGCCTGGAC AACTGCCCCA 001920 001921 TGGAGGACGC CGTGCAAATC CTGCGGCAGT GCGAGGACCT GGTGAAGCTG AAGATCCGGA AGGACGAGGA CAACTCTGAT 002000 002001 GAGCTGGAGA CCACAGGTGC CGTCAGTTAC ACAGTGGAGC TGAAGCGCTA CGGGGGTCCC CTGGGCATCA CCATTTCGGG 002080 002081 CACGGAGGAA CCTTTTGACC CCATTGTCAT CTCAGGCCTC ACCAAGCGTG GCCTGGCTGA GAGGACTGGT GCCATCCACG 002160 002161 TGGGGGACCG CATTCTGGCC ATCAACAACG TTAGCCTCAA GGGCCGGCCG CTGAGCGAGG CCATCCACCT CCTGCAGGTG 002240 002241 GCTGGAGAGA CCGTCACACT GAAGATCAAG AAGCAACTAG ACCGTCCCCT CCTACCCCGC AAGTCGGGCA GCCTCAGTGA 002320 002321 GACCAGTGAT GCTGATGAGG ACCCAGCAGA TGCCCTGAAA GGAGGCCTGC CAGCAGCCCG CTTCTCGCCG GCTGTGCCCA 002400 002401 GTGTGGACAG TGCTGTGGAG TCTTGGGACA GCTCGGCCAC CGAGGGTGGC TTTGGGGGCC CAGGGTCCTA TACACCACAG 002480 002481 GCAGCAGCCC GGGGCACGAC CCCCCAGGAG CGGAGGCCTG GCTGGCTGAG GGGCAGCCCC CCACCCACCG AGCCCCGGAG 002560 002561 GACGAGCTAT ACCCCAACCC CAGCTGACGA GAGCTTTCCA GAGGAGGAGG AGGAGGATGA TTGGGAGCCG CCAACGAGCC 002640 002641 CAGCCCCTGG CCCTGCCCGA GAGGAGGGCT TCTGGCGCAT GTTTGGAGAA GCTCTCGAAG ACCTGGAGTC ATGTGGTCAG 002720 002721 TCAGAGCTGC TGAGGGAACT GGAGGCATCC ATCATGACGG GCACCGTGCA GAGGGTGGCC CTCGAGGGCA GGCCTGGCCA 002800 002801 CCGGCCTTGG CAGAGGGGCC GGGAGGTACG AGCCTCTCCT GCAGAAATGG AGGAGCTGTT GCTGCCTACA CCCTTGGAGA 002880 002881 TGCACAAGGT GACCCTGCAC AAGGACCCCA TGCGGCATGA CTTTGGTTTC AGCGTCTCAG ATGGCCTCCT GGAAAAAGGT 002960 002961 GTCTATGTCC ACACTGTGCG CCCTGATGGG CCAGCCCACC GTGGAGGCCT CCAGCCCTTC GACAGGGTCC TGCAGGTCAA 003040 003041 CCACGTCCGT ACACGGGACT TCGACTGCTG CCTGGCGGTG CCACTCCTGG CCGAGGCGGG TGATGTCTTG GAGCTGATCA 003120 003121 TCAGCCGCAA GCCGCACACG GCACACAGCA GCCGGGCCCC CCGATCGCCA GGCCCCAGCA GTCCCCGGAT GCTCTGAAGT 003200 003201 CAGCATGTGG GCCGAACTCC TAAGGGGCCA CCCAGGCAGA TCCTGGCTCC CAGACACGTA GCTGGGCTGG AGAAGCGGCC 003280 003281 ACCCACTCAT TCATCTGTTG GTCTGGCAGA CTCTGAGCCT GGGATGATGC TTGGTCTCTG TTCCCCAGGT CTGTGGTGAC 003360 003361 TGGGGTGCCA GGCAGGGAGG TCCTGCCCTA GTTGGAGTGA CAGCTGGGGT CTCTCGCCAA GTTGGGTCTC CAAGATGCCC 003440 003441 AGAGGAGCCT CCCTTAAGAA GGGTTGGCAC AGGCTGCTCA GCCGAGAGGA GAGAGGCCTG GGGGCTGTCC CAGGTCTCTG 003520 003521 TGGGGCCTCC TTGGAGAGGT CGAAGATGTA GGGAGCACTT CCTCCCAGCA AAGCCATGGA GCTGGAATGA GCTGCAAGGA 003600 003601 GGAGTGAGTT CTCGGTCACA GGAGGTGAGC AGGCAGGAGC TGGATACCCC AGCGCAGTCA TGCATTGGGG TATGAGGCAT 003680 003681 TCCCATGATG CGTGCACACG CGCTTGGGGG TTGGCTTCCT GATGGGGAGC CACTTCATCT AGAGACTCGG CCACCAGGAA 003760 003761 GGATGCTGCT TCGGATGGGA GCCCAGCTCC TTCGCTTCTC CAGAATAGGG GTTTGGGGCT TGCTAGTCCT GAGATTCTGA 003840 003841 GATTCCCAGA ATCTGGTCCC CACTTATGAG ACTCTTAAGT TGGGGCGTCT GGGATCCCAG GAAGTGCTGG CCCTTTGATT 003920 003921 CTGAAAGTGG GTGATTCTTT GATTTCAGCA TCTCAGTCTG AAGCTTCTGG GACTTGAGAC TGTGGTTCTG GGCCCATTGG 004000 004001 GCAGGCTCTA TGGGCCTTGG GCTCTCAGCC CTCCTGCTTC TTCTGTAGGC CGTGTGGCCA CTGACCCATC TGCACGTCCG 004080 004081 CTCAGCCCAA GCCCCTCCAT GTGGGAGGGG TCATTTTGGG GCAAAAGACC CTGGAGCTTC CATTCACCTG CCATCCAGTG 004160 004161 AAAATTGAAA AGCGATGGAC GCAGGACCTG TGAGGCGGTA GCGCTCCTCT TTACAGCCAG ATCAGTGGAG GAAGAGGAGA 004240 004241 AAGAGGGAGG GAGATGGGAG AGAAATGGGC CAGAGAAAAA GATGGGACAC TCTTGCCCAG TGGAGGGTGT CCAAAGTGCT 004320 004321 TATTCAAAGA AGTCTATTCC CACTTGAAAT CTGGAAGCAC CAGCATCCCT TAAAATCATT GTCCTCAGTG TCCACAAATC 004400 004401 AGAGACCCTC TTCATTTTGA GAAGGGTGTG GGCCTCCCCT GGTGGTCTAG TGAGTGGTGC CTGGGATGGA GTGGGCGGGC 004480 004481 AGGTGTAGCC AGGGCTGGGG ATGTGCTTTG CCTGGCCCAG TTCTCACAGG GGTCTCAGGA AAACGGGGCA CCCACTCCCA 004560 004561 CCTCCATCTG TCTCCAACCT GGGGTCCCTG GAGGCCAGAA AAGTGCTCTT CCATTTGAGG GAACAGATGA GGAGTCAAGA 004640 004641 GGTCTGTTCT TTTCACCCTG GGTCTGTTAC CTGTTTGCTG TGTGACCCTG TCTGGGTTGG ACCCCCAGCC CCTCTGGACG 004720 004721 ATCACGGGTG GACAGTCTGA GCAGACACAG GCCTCCTGGT CAGGGCCGGA ACCATCTCTG CCGACCCACC AAGGCCCCCT 004800 004801 TGGGGACCTG CCCACGCTGT CTCCTGGAGG CCTGCCTCCC TTACCCCTCC CCTCCACTTC GCTGGGCTCT GCCCCTTGGT 004880 004881 GCCCTCCCTG AGGGCCCTGC ATGCTTGTGC CTGGGGTGCT CAGCGCCTCT GCTATCTTGG ATTCCCGTGT ACTCAGCCCA 004960 004961 GAGTGAAAGG GCACTGTCTA CCTGTCACAG GGCACCAAGT GAAAGCCAAG AGCCCTCACT TTTGAGGGTG AGGGACAGCA 005040 005041 CAGCAGAGGT GTGGCTTCTG GATGCAAGCA GCCATAGCTG TGTGACCTTG GACAGGTGGC TCAGCCTCTC TGGACCTCTG 005120 005121 CTAAGCAACA GGGCTGGACA GGACACACTC TCAGGGCCTC TCGGCTTGGG AAAACTGCAT TGACTCCAGG ACTCCAGGCG 005200 005201 AGGGAAGATG CACCCGACTC TAACTAATAC CCCCCTCCCT CCTCGGGCTG AGGCCTCTGC CATTCTCCCA AAAGTATGCA 005280 005281 ATCAGGCCCG CGGTGGGCCT CCCAGCCATG CCGGCCTCCT CATATGCAAT ATTTCTTCTG GCTTCTCATG GGGATGGTTC 005360 005361 ATCCCCGACT TGAAATTTCC TGACACCTTT CCCCAGTGAG CGCCCTGCCT GCCTATGCAT TTTGGGAACA GCCCCTGTGA 005440 005441 CATGTCCCCT TCCACCTGCC CTCTCCCCCA AAGCTGTATT TTTCTCTGGC TGAGATTAGA ACACATTCCT TGTAAAGTAT 005520 005521 TTTTCTACAT CGGGTTTTCT TAGGGCTCTC GGGAAGCACA AGGGGCTGTA TTGCAAAGGC CGCTTATGGT CTGTTTGGGG 005600 005601 CCCTCGTCTA AGTCTTTGTC CCACCAGGGG TTGCAGTGGC TTGGGGGTAG GTGCCATGGG GATGATTTTT TAAAATAAAA 005680 005681 TTATTTAAAT CCACCTAGAG TAGAAGTTTG CTTTTTAAAA AAATCATGGA TTGGCAAGAG TCAGCTTCTG TATGGGTCTG 005760 005761 GTGACATCTC ACCTGCTTTT GATGATTCAT TAATTCAAAA AGTTTGCCAT TTGCTTCCAT CATCCAGCCC CTGGGCAACA 005840 005841 TGAATCAGAC AGATTTAGGT CATGTCTGCA CATTCTGGTG GCAGGCAGAC AATCAACAAG TAAGCAAATA AATAATTATT 005920 005921 TCAAAAGGCA TCAAGTGCAA CAAAGAAAAC AAGGGAGTAA CGGGATAGAG GGACCAGGGT GAGGGGCTTT AGCTCACAAT 006000 006001 ATTAGGAGGG GTTTCTCTCA AGAGGCGACA TTTGCAATGA GACCTGAAGA CAGGAGCCAG CCTCCATGGA GACCTGGAGG 006080 006081 AAGAGTGTCT CAGGCAGCGG GCACAGCTAG TGCAAAGGCC CTGAGATAGG AACGAGTTTG ACGGTCTCAA GGAAGAGAAA 006160 006161 GAAGGCCTGG GAGGGGAATG GGGCTGGAGA CTAGGTTGGA GGTAGCAGGA ATCAGTCGTG AAGGCTTGGG TAGGGGGAGC 006240 006241 AAATTTGATT CTCTGCGCAG CAGAAAGCCA GAGGCAGGCA GTGGTGCCTG CATATGGAGT CTCTTTAGCC CAGGTTGGGA 006320 006321 AGGTAGTGGC AGGAGGGCAG CCTCAGGTCT GGCTGCTGCC CTGGAGTGTC CAGAGAGTGT CTAGGGCAGG TGAGCTACAG 006400 006401 GGTCTGGGAC CCAGAGGCCA GGGCCAGGCC CCACTGGGGA GGCCACAGTT CTGTGAGCAG AGGAAGAGCT TCTTTCCAGG 006480 006481 AAGCGAGTAC TCTGTCTTGG GAGTGGTGTA GGCAGGGGGA AGGCCAAGGG AGGCAGCAGG CCTTGCTCTA AGCGCTTTGC 006560 006561 AAGAGCTTGC TGGATCCTCC CAATAGCCTT TGGAGGTGGG CTCTATTCCT GTCCCATCAT TACAGATGAG GAAACAGGCA 006640 006641 CAGAGAGGTT ACGTAATTTG CCCAAGTCCA CACAGGTAGT AAGGGATGGA ACCAGGGCTT GAACACAAGC CACATGGCCC 006720 006721 AGTACACATA GAGAGAGGCA GGCAGGTAGG CATAGGCTGT CAGAAAGAGC CAGAAAATGG GGGTAGGGTG GTCTTCTATT 006800 006801 CTAACATTGT CTATAAATGA GTTACTGAGA ATTTTGTCTG GTTAGTTGGG CAAAGGGCTC AACTGACTCC CGAGTTTGTC 006880 006881 CATCCCAAAG GGTGGGGGGC GCTGTTGGCA GGAAGGCTGC CCCAAACATG GACCTGTTGT GACCCCAGAG AGCCCCTAAC 006960 006961 TGGGTATTAA TGAGCGCCTG CACCTGACGG TGGGGGAGTG GGAGAAGGGC AATCAGGTTT GCTCCCCCTC TACCCTTTCC 007040 007041 CCCACTCCGC CACCCGCTTT CTGCCCTTCT GGCAGGTCAG CCCAAGGCTA AAGAGGAGGG ACTGAAAGCC GCAGCAGGTG 007120 007121 AGCACCTAAG GCCAAGAGCA TCACCTCCAA TCATCCTGGT GGCCTTGATG GGGACAATGG TTTATTCCAG ATGGGGAAAC 007200 007201 TGAGGCTCAG GTGACTGCTG CCAGATCTCC CAGCTGTACA GGGCTGGGCA TGTAGCAGGT AGAATCAGTA GAGCCAGTAG 007280 007281 AGCCAAGAGC TCATGGGCCC GGGTGCGAAT CCAGGTTCTT TCATGGACTT GCTGTGTACC CCTGAGTGAG CAAGCTGCTT 007360 007361 CCTCTGTGAG CCTCCATGTG GGAACCTCTA ACCTGGGAAA ATACCTACCT TTGAGGAGCG TCCTGGGATT GGACGGGAAG 007440 007441 CCCTTTATAA AATGTAAAGC GTTTGGCAAA CGTTGAGGGG GAAATACCTC ACCAGAACAC AACCCACACA TGTTGGATGT 007520 007521 TAAAAAGGAA ATGTTTATTT TCATGTTATA AGGTGATTAC AAACTCCTCT AAAAAAAGCA AAGATGAATT TAAAATATTG 007600 007601 ATATACATAT TTATCTAAAA AGCAAAAGAG AAAAAAACCC CTGCAAAATA CAGGGAATCA TATCATAAAA CATTTATACA 007680 007681 CAAAAGCTTG TATACTGCAA GACTGAACTA CACACCAAGG ATCTTGTTCA AATACAAATG TTCCTCCTCA G

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