Lnc-XPC-5:5

Same as ENST00000443613.2

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID	ENST00000443613.2
Source	Gencode19
Same with	lnc-XPC-5:5
Classification	antisense,sense
Length	7710 nt
Genomic location	chr3-:14530619..14581836
Exon number	24
Exons	14530619..14535334,14536351..14536497,14537925..14538068,14545074..14545179,14547123..14547297,14548309..14548488,14549069..14549208,14551328..14551472,14552673..14552818,14552921..14552987,14554285..14554365,14555173..14555318,14555800..14555986,14558572..14558721,14559280..14559405,14561614..14561786,14561897..14562044,14563149..14563294,14564507..14564582,14565119..14565205,14565900..14566045,14566944..14567079,14567358..14567438,14581776..14581836
Genome context
Sequence	000001 GCAGGGGAGA CAATAGCGAA CATGCTGTGT GGGCTCAGCC GGGAGACCCC TGGAGAGGCG GACGATGGGC CCTACTCCAA 000080 000081 AGGAGGCAAG GACGCAGGAG GGGCCGACGT TTCCCTGGCG TGCCGCAGAC AGAGCATTCC AGAGGAGTTC CGAGGGATCA 000160 000161 CTGTGGTGGA GCTGATCAAG AAAGAAGGCA GCACGCTGGG CCTGACTATC TCAGGTGGCA CCGACAAGGA TGGAAAGCCC 000240 000241 AGGGTCTCCA ACCTGAGACC TGGGGGACTT GCAGCCAGGA GTGATCTGCT GAACATTGGT GACTATATTC GGTCTGTGAA 000320 000321 CGGGATCCAC CTGACCAGGC TCCGCCACGA TGAGATCATC ACCCTGCTCA AGAATGTGGG CGAGCGCGTG GTGCTGGAGG 000400 000401 TGGAGTATGA GCTGCCCCCG CCCGCTCCTG AGAATAACCC CAGGATCATT TCAAAGACAG TGGACGTCTC CCTCTACAAG 000480 000481 GAGGGCAATA GCTTTGGCTT TGTCCTTAGA GGAGGTGCCC ATGAAGATGG GCACAAGTCC CGCCCGCTTG TCCTGACCTA 000560 000561 CGTGCGGCCC GGTGGCCCTG CCGACAGGGA GGGCTCCCTG AAGGTGGGCG ACAGGCTGCT CAGTGTCGAT GGAATCCCGC 000640 000641 TGCACGGGGC CAGCCATGCC ACCGCCCTGG CCACCCTGCG GCAGTGCAGC CACGAGGCAC TCTTTCAGGT GGAGTATGAT 000720 000721 GTGGCCACCC CTGACACGGT GGCTAATGCT TCGGGACCCT TGATGGTGGA AATAGTCAAG ACGCCAGGGT CTGCCCTGGG 000800 000801 GATCTCGCTC ACCACCACCT CCCTCCGGAA CAAGTCAGTC ATTACCATCG ACCGCATCAA GCCAGCCAGC GTGGTGGACA 000880 000881 GGAGCGGAGC CCTGCACCCT GGAGACCACA TCCTGTCCAT CGATGGCACC AGCATGGAAC ACTGCTCGCT GCTTGAGGCC 000960 000961 ACCAAGCTCC TGGCCAGCAT TTCAGAGAAG GTGCGGCTGG AGATCCTGCC TGTGCCCCAG AGTCAGCGGC CACTGAGGCC 001040 001041 TCAGAGGCAG GTGGTGAAAG TGCAGAGGAG TGAGCAGCTG CACCGCTGGG ACCCCTGCGT GCCCTCCTGC CACAGCCCCC 001120 001121 GGCCCGGCCA CTGCAGGATG CCCACCTGGG CCACACCTGC TGGCCAGGAC CAAAGCCGAT CCTTGTCTTC AACTCCCTTT 001200 001201 TCCTCGCCGA CCTTGAACCA CGCCTTTTCC TGCAACAACC CCAGCACCCT TCCCCGTGGA TCCCAGCCCA TGAGTCCTCG 001280 001281 AACTACAATG GGGCGGAGGA GGCAGCGAAG AAGGGAACAC AAGAGCTCGT TGTCGCTAGC CTCCAGCACG GTGGGGCCGG 001360 001361 GCGGGCAGAT TGTGCACACG GAGACCACGG AGGTCGTGCT CTGTGGAGAC CCCCTCAGCG GCTTTGGCCT CCAGCTCCAG 001440 001441 GGCGGCATCT TCGCCACCGA GACCCTGTCC TCCCCACCCC TCGTGTGCTT CATCGAGCCT GACAGTCCGG CTGAGAGGTG 001520 001521 TGGGCTGCTG CAGGTGGGGG ACCGTGTCCT GTCCATCAAT GGCATTGCCA CCGAGGACGG GACTATGGAG GAAGCCAACC 001600 001601 AGCTCCTGCG GGACGCCGCA CTGGCCCACA AGGTCGTGCT GGAGGTGGAG TTCGATGTGG CGGAGTCCGT CATCCCAAGC 001680 001681 AGTGGCACCT TCCACGTGAA GCTGCCCAAG AAGCGCAGCG TGGAGCTGGG CATCACCATC AGCTCGGCCA GCAGGAAACG 001760 001761 AGGGGAGCCC TTGATCATCT CCGACATCAA GAAAGGCAGC GTGGCACACA GGACGGGCAC CCTGGAGCCA GGCGACAAGC 001840 001841 TACTGGCCAT TGACAATATC CGCCTGGACA ACTGCCCCAT GGAGGACGCC GTGCAAATCC TGCGGCAGTG CGAGGACCTG 001920 001921 GTGAAGCTGA AGATCCGGAA GGACGAGGAC AACTCTGATG AGCTGGAGAC CACAGGTGCC GTCAGTTACA CAGTGGAGCT 002000 002001 GAAGCGCTAC GGGGGTCCCC TGGGCATCAC CATTTCGGGC ACGGAGGAAC CTTTTGACCC CATTGTCATC TCAGGCCTCA 002080 002081 CCAAGCGTGG CCTGGCTGAG AGGACTGGTG CCATCCACGT GGGGGACCGC ATTCTGGCCA TCAACAACGT TAGCCTCAAG 002160 002161 GGCCGGCCGC TGAGCGAGGC CATCCACCTC CTGCAGGTGG CTGGAGAGAC CGTCACACTG AAGATCAAGA AGCAACTAGA 002240 002241 CCGTCCCCTC CTACCCCGCA AGTCGGGCAG CCTCAGTGAG ACCAGTGATG CTGATGAGGA CCCAGCAGAT GCCCTGAAAG 002320 002321 GAGGCCTGCC AGCAGCCCGC TTCTCGCCGG CTGTGCCCAG TGTGGACAGT GCTGTGGAGT CTTGGGACAG CTCGGCCACC 002400 002401 GAGGGTGGCT TTGGGGGCCC AGGGTCCTAT ACACCACAGG CAGCAGCCCG GGGCACGACC CCCCAGGAGC GGAGGCCTGG 002480 002481 CTGGCTGAGG GGCAGCCCCC CACCCACCGA GCCCCGGAGG ACGAGCTATA CCCCAACCCC AGCTGACGAG AGCTTTCCAG 002560 002561 AGGAGGAGGA GGAGGATGAT TGGGAGCCGC CAACGAGCCC AGCCCCTGGC CCTGCCCGAG AGGAGGGCTT CTGGCGCATG 002640 002641 TTTGGAGAAG CTCTCGAAGA CCTGGAGTCA TGTGGTCAGT CAGAGCTGCT GAGGGAACTG GAGGCATCCA TCATGACGGG 002720 002721 CACCGTGCAG AGGGTGGCCC TCGAGGGCAG GCCTGGCCAC CGGCCTTGGC AGAGGGGCCG GGAGGTACGA GCCTCTCCTG 002800 002801 CAGAAATGGA GGAGCTGTTG CTGCCTACAC CCTTGGAGAT GCACAAGGTG ACCCTGCACA AGGACCCCAT GCGGCATGAC 002880 002881 TTTGGTTTCA GCGTCTCAGA TGGCCTCCTG GAAAAAGGTG TCTATGTCCA CACTGTGCGC CCTGATGGGC CAGCCCACCG 002960 002961 TGGAGGCCTC CAGCCCTTCG ACAGGGTCCT GCAGGTCAAC CACGTCCGTA CACGGGACTT CGACTGCTGC CTGGCGGTGC 003040 003041 CACTCCTGGC CGAGGCGGGT GATGTCTTGG AGCTGATCAT CAGCCGCAAG CCGCACACGG CACACAGCAG CCGGGCCCCC 003120 003121 CGATCGCCAG GCCCCAGCAG TCCCCGGATG CTCTGAAGTC AGCATGTGGG CCGAACTCCT AAGGGGCCAC CCAGGCAGAT 003200 003201 CCTGGCTCCC AGACACGTAG CTGGGCTGGA GAAGCGGCCA CCCACTCATT CATCTGTTGG TCTGGCAGAC TCTGAGCCTG 003280 003281 GGATGATGCT TGGTCTCTGT TCCCCAGGTC TGTGGTGACT GGGGTGCCAG GCAGGGAGGT CCTGCCCTAG TTGGAGTGAC 003360 003361 AGCTGGGGTC TCTCGCCAAG TTGGGTCTCC AAGATGCCCA GAGGAGCCTC CCTTAAGAAG GGTTGGCACA GGCTGCTCAG 003440 003441 CCGAGAGGAG AGAGGCCTGG GGGCTGTCCC AGGTCTCTGT GGGGCCTCCT TGGAGAGGTC GAAGATGTAG GGAGCACTTC 003520 003521 CTCCCAGCAA AGCCATGGAG CTGGAATGAG CTGCAAGGAG GAGTGAGTTC TCGGTCACAG GAGGTGAGCA GGCAGGAGCT 003600 003601 GGATACCCCA GCGCAGTCAT GCATTGGGGT ATGAGGCATT CCCATGATGC GTGCACACGC GCTTGGGGGT TGGCTTCCTG 003680 003681 ATGGGGAGCC ACTTCATCTA GAGACTCGGC CACCAGGAAG GATGCTGCTT CGGATGGGAG CCCAGCTCCT TCGCTTCTCC 003760 003761 AGAATAGGGG TTTGGGGCTT GCTAGTCCTG AGATTCTGAG ATTCCCAGAA TCTGGTCCCC ACTTATGAGA CTCTTAAGTT 003840 003841 GGGGCGTCTG GGATCCCAGG AAGTGCTGGC CCTTTGATTC TGAAAGTGGG TGATTCTTTG ATTTCAGCAT CTCAGTCTGA 003920 003921 AGCTTCTGGG ACTTGAGACT GTGGTTCTGG GCCCATTGGG CAGGCTCTAT GGGCCTTGGG CTCTCAGCCC TCCTGCTTCT 004000 004001 TCTGTAGGCC GTGTGGCCAC TGACCCATCT GCACGTCCGC TCAGCCCAAG CCCCTCCATG TGGGAGGGGT CATTTTGGGG 004080 004081 CAAAAGACCC TGGAGCTTCC ATTCACCTGC CATCCAGTGA AAATTGAAAA GCGATGGACG CAGGACCTGT GAGGCGGTAG 004160 004161 CGCTCCTCTT TACAGCCAGA TCAGTGGAGG AAGAGGAGAA AGAGGGAGGG AGATGGGAGA GAAATGGGCC AGAGAAAAAG 004240 004241 ATGGGACACT CTTGCCCAGT GGAGGGTGTC CAAAGTGCTT ATTCAAAGAA GTCTATTCCC ACTTGAAATC TGGAAGCACC 004320 004321 AGCATCCCTT AAAATCATTG TCCTCAGTGT CCACAAATCA GAGACCCTCT TCATTTTGAG AAGGGTGTGG GCCTCCCCTG 004400 004401 GTGGTCTAGT GAGTGGTGCC TGGGATGGAG TGGGCGGGCA GGTGTAGCCA GGGCTGGGGA TGTGCTTTGC CTGGCCCAGT 004480 004481 TCTCACAGGG GTCTCAGGAA AACGGGGCAC CCACTCCCAC CTCCATCTGT CTCCAACCTG GGGTCCCTGG AGGCCAGAAA 004560 004561 AGTGCTCTTC CATTTGAGGG AACAGATGAG GAGTCAAGAG GTCTGTTCTT TTCACCCTGG GTCTGTTACC TGTTTGCTGT 004640 004641 GTGACCCTGT CTGGGTTGGA CCCCCAGCCC CTCTGGACGA TCACGGGTGG ACAGTCTGAG CAGACACAGG CCTCCTGGTC 004720 004721 AGGGCCGGAA CCATCTCTGC CGACCCACCA AGGCCCCCTT GGGGACCTGC CCACGCTGTC TCCTGGAGGC CTGCCTCCCT 004800 004801 TACCCCTCCC CTCCACTTCG CTGGGCTCTG CCCCTTGGTG CCCTCCCTGA GGGCCCTGCA TGCTTGTGCC TGGGGTGCTC 004880 004881 AGCGCCTCTG CTATCTTGGA TTCCCGTGTA CTCAGCCCAG AGTGAAAGGG CACTGTCTAC CTGTCACAGG GCACCAAGTG 004960 004961 AAAGCCAAGA GCCCTCACTT TTGAGGGTGA GGGACAGCAC AGCAGAGGTG TGGCTTCTGG ATGCAAGCAG CCATAGCTGT 005040 005041 GTGACCTTGG ACAGGTGGCT CAGCCTCTCT GGACCTCTGC TAAGCAACAG GGCTGGACAG GACACACTCT CAGGGCCTCT 005120 005121 CGGCTTGGGA AAACTGCATT GACTCCAGGA CTCCAGGCGA GGGAAGATGC ACCCGACTCT AACTAATACC CCCCTCCCTC 005200 005201 CTCGGGCTGA GGCCTCTGCC ATTCTCCCAA AAGTATGCAA TCAGGCCCGC GGTGGGCCTC CCAGCCATGC CGGCCTCCTC 005280 005281 ATATGCAATA TTTCTTCTGG CTTCTCATGG GGATGGTTCA TCCCCGACTT GAAATTTCCT GACACCTTTC CCCAGTGAGC 005360 005361 GCCCTGCCTG CCTATGCATT TTGGGAACAG CCCCTGTGAC ATGTCCCCTT CCACCTGCCC TCTCCCCCAA AGCTGTATTT 005440 005441 TTCTCTGGCT GAGATTAGAA CACATTCCTT GTAAAGTATT TTTCTACATC GGGTTTTCTT AGGGCTCTCG GGAAGCACAA 005520 005521 GGGGCTGTAT TGCAAAGGCC GCTTATGGTC TGTTTGGGGC CCTCGTCTAA GTCTTTGTCC CACCAGGGGT TGCAGTGGCT 005600 005601 TGGGGGTAGG TGCCATGGGG ATGATTTTTT AAAATAAAAT TATTTAAATC CACCTAGAGT AGAAGTTTGC TTTTTAAAAA 005680 005681 AATCATGGAT TGGCAAGAGT CAGCTTCTGT ATGGGTCTGG TGACATCTCA CCTGCTTTTG ATGATTCATT AATTCAAAAA 005760 005761 GTTTGCCATT TGCTTCCATC ATCCAGCCCC TGGGCAACAT GAATCAGACA GATTTAGGTC ATGTCTGCAC ATTCTGGTGG 005840 005841 CAGGCAGACA ATCAACAAGT AAGCAAATAA ATAATTATTT CAAAAGGCAT CAAGTGCAAC AAAGAAAACA AGGGAGTAAC 005920 005921 GGGATAGAGG GACCAGGGTG AGGGGCTTTA GCTCACAATA TTAGGAGGGG TTTCTCTCAA GAGGCGACAT TTGCAATGAG 006000 006001 ACCTGAAGAC AGGAGCCAGC CTCCATGGAG ACCTGGAGGA AGAGTGTCTC AGGCAGCGGG CACAGCTAGT GCAAAGGCCC 006080 006081 TGAGATAGGA ACGAGTTTGA CGGTCTCAAG GAAGAGAAAG AAGGCCTGGG AGGGGAATGG GGCTGGAGAC TAGGTTGGAG 006160 006161 GTAGCAGGAA TCAGTCGTGA AGGCTTGGGT AGGGGGAGCA AATTTGATTC TCTGCGCAGC AGAAAGCCAG AGGCAGGCAG 006240 006241 TGGTGCCTGC ATATGGAGTC TCTTTAGCCC AGGTTGGGAA GGTAGTGGCA GGAGGGCAGC CTCAGGTCTG GCTGCTGCCC 006320 006321 TGGAGTGTCC AGAGAGTGTC TAGGGCAGGT GAGCTACAGG GTCTGGGACC CAGAGGCCAG GGCCAGGCCC CACTGGGGAG 006400 006401 GCCACAGTTC TGTGAGCAGA GGAAGAGCTT CTTTCCAGGA AGCGAGTACT CTGTCTTGGG AGTGGTGTAG GCAGGGGGAA 006480 006481 GGCCAAGGGA GGCAGCAGGC CTTGCTCTAA GCGCTTTGCA AGAGCTTGCT GGATCCTCCC AATAGCCTTT GGAGGTGGGC 006560 006561 TCTATTCCTG TCCCATCATT ACAGATGAGG AAACAGGCAC AGAGAGGTTA CGTAATTTGC CCAAGTCCAC ACAGGTAGTA 006640 006641 AGGGATGGAA CCAGGGCTTG AACACAAGCC ACATGGCCCA GTACACATAG AGAGAGGCAG GCAGGTAGGC ATAGGCTGTC 006720 006721 AGAAAGAGCC AGAAAATGGG GGTAGGGTGG TCTTCTATTC TAACATTGTC TATAAATGAG TTACTGAGAA TTTTGTCTGG 006800 006801 TTAGTTGGGC AAAGGGCTCA ACTGACTCCC GAGTTTGTCC ATCCCAAAGG GTGGGGGGCG CTGTTGGCAG GAAGGCTGCC 006880 006881 CCAAACATGG ACCTGTTGTG ACCCCAGAGA GCCCCTAACT GGGTATTAAT GAGCGCCTGC ACCTGACGGT GGGGGAGTGG 006960 006961 GAGAAGGGCA ATCAGGTTTG CTCCCCCTCT ACCCTTTCCC CCACTCCGCC ACCCGCTTTC TGCCCTTCTG GCAGGTCAGC 007040 007041 CCAAGGCTAA AGAGGAGGGA CTGAAAGCCG CAGCAGGTGA GCACCTAAGG CCAAGAGCAT CACCTCCAAT CATCCTGGTG 007120 007121 GCCTTGATGG GGACAATGGT TTATTCCAGA TGGGGAAACT GAGGCTCAGG TGACTGCTGC CAGATCTCCC AGCTGTACAG 007200 007201 GGCTGGGCAT GTAGCAGGTA GAATCAGTAG AGCCAGTAGA GCCAAGAGCT CATGGGCCCG GGTGCGAATC CAGGTTCTTT 007280 007281 CATGGACTTG CTGTGTACCC CTGAGTGAGC AAGCTGCTTC CTCTGTGAGC CTCCATGTGG GAACCTCTAA CCTGGGAAAA 007360 007361 TACCTACCTT TGAGGAGCGT CCTGGGATTG GACGGGAAGC CCTTTATAAA ATGTAAAGCG TTTGGCAAAC GTTGAGGGGG 007440 007441 AAATACCTCA CCAGAACACA ACCCACACAT GTTGGATGTT AAAAAGGAAA TGTTTATTTT CATGTTATAA GGTGATTACA 007520 007521 AACTCCTCTA AAAAAAGCAA AGATGAATTT AAAATATTGA TATACATATT TATCTAAAAA GCAAAAGAGA AAAAAACCCC 007600 007601 TGCAAAATAC AGGGAATCAT ATCATAAAAC ATTTATACAC AAAAGCTTGT ATACTGCAAG ACTGAACTAC ACACCAAGGA 007680 007681 TCTTGTTCAA ATACAAATGT TCCTCCTCAG

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