NONHSAT000003

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT000003

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

1483 nt

Genomic location

chr1+:11874..14409

Exon number

4

Exons

11874..12227,12595..12721,13403..13655,13661..14409

Genome context

Sequence
000001 CTTGCCGTCA GCCTTTTCTT TGACCTCTTC TTTCTGTTCA TGTGTATTTG CTGTCTCTTA GCCCAGACTT CCCGTGTCCT 000080
000081 TTCCACCGGG CCTTTGAGAG GTCACAGGGT CTTGATGCTG TGGTCTTCAT CTGCAGGTGT CTGACTTCCA GCAACTGCTG 000160
000161 GCCTGTGCCA GGGTGCAAGC TGAGCACTGG AGTGGAGTTT TCCTGTGGAG AGGAGCCATG CCTAGAGTGG GATGGGCCAT 000240
000241 TGTTCATCTT CTGGCCCCTG TTGTCTGCAT GTAACTTAAT ACCACAACCA GGCATAGGGG AAAGATTGGA GGAAAGATGA 000320
000321 GTGAGAGCAT CAACTTCTCT CACAACCTAG GCCAGCTCCT GTCTCCCCCC AGGTGTGTGG TGATGCCAGG CATGCCCTTC 000400
000401 CCCAGCATCA GGTCTCCAGA GCTGCAGAAG ACGACGGCCG ACTTGGATCA CACTCTTGTG AGTGTCCCCA GTGTTGCAGA 000480
000481 GAGCCTCCAC CACCCCGAGA TCACATTTCT CACTGCCTTT TGTCTGCCCA GTTTCACCAG AAGTAGGCCT CTTCCTGACA 000560
000561 GGCAGCTGCA CCACTGCCTG GCGCTGTGCC CTTCCTTTGC TCTGCCCGCT GGAGACGGTG TTTGTCATGG GCCTGGTCTG 000640
000641 CAGGGATCCT GCTACAAAGG TGAAACCCAG GAGAGTGTGG AGTCCAGAGT GTTGCCAGGA CCCAGGCACA GGCATTAGTG 000720
000721 CCCGTTGGAG AAAAGAATCC CGAAGAAATG GTGGGTCCTG GCCATCCGTG AGATCTTCCC AGGGCAGCTC CCCTCTGTGG 000800
000801 AATCCAATCT GTCTTCCATC CTGCGTGGCC GAGGGCCAGG CTTCTCACTG GGCCTCTGCA GGAGGCTGCC ATTTGTCCTG 000880
000881 CCCACCTTCT TAGAAGCGAG ACGGAGCAGA CCCATCTGCT ACTGCCCTTT CTATAATAAC TAAAGTTAGC TGCCCTGGAC 000960
000961 TATTCACCCC CTAGTCTCAA TTTAAGAAGA TCCCCATGGC CACAGGGCCC CTGCCTGGGG GCTTGTCACC TCCCCCACCT 001040
001041 TCTTCCTGAG TCATTCCTGC AGCCTTGCTC CCTAACCTGC CCCACAGCCT TGCCTGGATT TCTATCTCCC TGGCTTGGTG 001120
001121 CCAGTTCCTC CAAGTCGATG GCACCTCCCT CCCTCTCAAC CACTTGAGCA AACTCCAAGA CATCTTCTAC CCCAACACCA 001200
001201 GCAATTGTGC CAAGGGCCAT TAGGCTCTCA GCATGACTAT TTTTAGAGAC CCCGTGTCTG TCACTGAAAC CTTTTTTGTG 001280
001281 GGAGACTATT CCTCCCATCT GCAACAGCTG CCCCTGCTGA CTGCCCTTCT CTCCTCCCTC TCATCCCAGA GAAACAGGTC 001360
001361 AGCTGGGAGC TTCTGCCCCC ACTGCCTAGG GACCAACAGG GGCAGGAGGC AGTCACTGAC CCCGAGACGT TTGCATCCTG 001440
001441 CACAGCTAGA GATCCTTTAT TAAAAGCACA CTGTTGGTTT CTG
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Predicted Small Protein

Name NONHSAT000003_smProtein_626:892
Length 89
Molecular weight 9447.6235
Aromaticity 0.0568181818182
Instability index 89.7318181818
Isoelectric point 9.26275634766
Runs 14
Runs residual 0.0277272727273
Runs probability 0.0136586165998
Amino acid sequence MGLVCRDPATKVKPRRVWSPECCQDPGTGISARWRKESRRNGGSWPSVRSSQGSSPLWNP
ICLPSCVAEGQASHWASAGGCHLSCPPS
Secondary structure LLEEELLLLLLLLLLLLLLLLLLLLLLLLLLEEEELLLLLLLLLLLLEELLLLLLLLLLL
LLLLHHHLLLLEEHHHLLLLEELLLLLL
PRMN -
PiMo -