NONHSAT000166

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT000166

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

1543 nt

Genomic location

chr1+:763064..789740

Exon number

7

Exons

763064..763155,764383..764484,783034..783186,787307..787490,788051..788146,788771..788902,788957..789740

Genome context

Sequence
000001 CGCCGGTTGA AAGCGCGTGT CTGCGTCGGG TTCTGTTGGA GTGCGTTCGG TGCGCCGTGG GTCCGCGCTG CTTCCACCCA 000080
000081 ACTTCCTGTT AGTTTCTCTC CTGTCACAAT GGCATGATCT CGGCTCACTG CGACCTCTGC TTCCTGGGTT CAAGGATTCT 000160
000161 CCTGCCTCAG CCTCCCAAGT AGCTGGGATT ACAGTTTCCA TCATTATCTT CTATGGAGTT CTTCATTCCC ACATCTGTGG 000240
000241 ACCTTAAAAT CCTACCGTTG AGTGCCTGCC TTGGATCAGC AGTCAGTTCG TTACCTTGGT TCTCAGACGA TGCTTGCAAC 000320
000321 AACGCCATGC GATTCGCCCA CTCTTGGGTT ACATTAGTTA TACACTCTGG AGGTGACTTG ACCTGTCATT GTGAACAATT 000400
000401 ATTGCTCTTG GACGACCCAG GACATAGGCC AGCCAGTACG TACCCCAGTG TGTTGGAGAA TCGCGCTCGG CTTCTTCCTC 000480
000481 TGTGCTGAGT CATGAAAGTT GCCGGAGCAG GTGCAGTTAC ACAACCTCCA GGTATGATCC TGTTTAAGGA CTGGATTTAG 000560
000561 GATAACTACT TAGAGGTTAA AAGTCACAAG GGTGTATGGA TGAGGCTGGA GTGATCTGGG ACCAAAGACA TCTAGGCTTG 000640
000641 CTGTCAAGGC TTCTGATCAA CATGAGATGA CCGCCGTGTG GTAAACTGAT GAACCCTGAC CCTGATCAAC ATGAGATGAC 000720
000721 CGCCGTGTGG TAAACTGATG AACCCCGACC CTGATGAACA TGACCGCCGT GTGGTAAACT GATGAACCCC GACCCTGATG 000800
000801 AACGTGAGAT GACCGCCGTG TGGTAAACTG ATGAACCCCG ACCCTGATGA ACGTGAGATG ACCGCCGTGT GGTAAACTGA 000880
000881 TGAACCCCGA CCCTGATCAA CGTGAGATGA CCGCCGTGTG GTAAACTGAT GAACCCCGAC CCTGATGAAC ATGAGATGAC 000960
000961 CGCCGTGTGG TAAACTGATG AACCCCGACC CTGATCAACA TGAGATGACC GCCGTGTGGT AAACTGATGA ACCCCGACCC 001040
001041 TGATCAACAT GAGATGACTG CCGTGTGGTA AACTGATGAA CCCTGACCCA TTAGGCTTTG GCTACAGAAT GTGGAAATAA 001120
001121 GTTGTGTTAC TACATGTGTG TAATCCTAGG GTGCAGGACA CCGGCCGGGA GGTTCCATAG AGTGATGGGT TCTGCAGGTA 001200
001201 ACTCATCCTC TAGTCCTCTG TAAGCTCCTA GAAGGAAGAA ATTATGTCCT TTAGACTAAT AAAATTCCTC CAAACCAAAT 001280
001281 ACAGCACCTA CTGTGAAGAC ACAAAGATAC TTTTAGAATA GTAAAAACTT TATCCATTGA GAAATTCCTT AATGAAACAG 001360
001361 TATCCAAGAA GTCATTTGCC AGCAGATTTC TTAGAGGTGC GATAAAGAAG AGGACATTGC CAGTCGTCAC AGCAGCTGCA 001440
001441 ATAGCTCCTC TCTATTGTTA AACAGTGGGA TATCTTGTGC AGGTTTTCAG TTGACAATCA ATTTTAAAGA TTAGTTTCGG 001520
001521 TCCCCATCAA TCAATTATTT ATT
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Predicted Small Protein

Name NONHSAT000166_smProtein_212:487
Length 92
Molecular weight 9983.423
Aromaticity 0.0769230769231
Instability index 40.5846153846
Isoelectric point 5.29876708984
Runs 14
Runs residual 0.0203754578755
Runs probability 0.0480922098569
Amino acid sequence MEFFIPTSVDLKILPLSACLGSAVSSLPWFSDDACNNAMRFAHSWVTLVIHSGGDLTCHC
EQLLLLDDPGHRPASTYPSVLENRARLLPLC
Secondary structure LEEEELLLLLLEELLLLHHHLLLLLLLLLLLHHHHHHHHHHHHHHEEEEEELLLLLLHHH
HHHHHLLLLLLLLLLLLLHHHHHHHHHLLLL
PRMN -
PiMo -