NONHSAT000177

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT000177

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

3675 nt

Genomic location

chr1+:782945..793145

Exon number

4

Exons

782945..783186,787307..787490,788771..790501,791628..793145

Genome context

Sequence
000001 CTGGAAAGAA GGAAGGGTGA TCCTGCTAAG ACAGGGCGTT GTGAAGATTT CCTTTCCCTC CGAACTAACA TCTCACTCAC 000080
000081 TTCTCTCAGT TTCCATCATT ATCTTCTATG GAGTTCTTCA TTCCCACATC TGTGGACCTT AAAATCCTAC CGTTGAGTGC 000160
000161 CTGCCTTGGA TCAGCAGTCA GTTCGTTACC TTGGTTCTCA GACGATGCTT GCAACAACGC CATGCGATTC GCCCACTCTT 000240
000241 GGGTTACATT AGTTATACAC TCTGGAGGTG ACTTGACCTG TCATTGTGAA CAATTATTGC TCTTGGACGA CCCAGGACAT 000320
000321 AGGCCAGCCA GTACGTACCC CAGTGTGTTG GAGAATCGCG CTCGGCTTCT TCCTCTGTGC TGAGTCATGA AAGTTGCCGG 000400
000401 AGCAGGTGCA GTTACACAAC CTCCAGacat ctaggcttgc tgtcaaggct tctgatcaac atgagatgac cGCCGTGTGG 000480
000481 TAAACTGATG AACCCTGACC CTGATCAACA TGAGATGACC GCCGTGTGGT AAACTGATGA ACCCCGACCC TGATGAACGT 000560
000561 GAGATGACCG CCGTGTGGTA AACTGATGAA CCCCGACCCT GATGAACGTG AGATGACCGC CGTGTGGTAA ACTGATGAAC 000640
000641 CCCGACCCTG ATGAACGTGA GATGACCGCC GTGTGGTAAA CTGATGAACC CCGACCCTGA TGAACGTGAG ATGACCGCCG 000720
000721 TGTGGTAAAC TGATGAACCC CGACCCTGAT CAACGTGAGA TGACCGCCGT GTGGTAAACT GATGAACCCC GACCCTGATG 000800
000801 AACATGAGAT GACCGCCGTG TGGTAAACTG ATGAACCCCG ACCCTGATCA ACATGAGATG ACCGCCGTGT GGTAAACTGA 000880
000881 TGAACCCCGA CCCTGATCAA CATGAGATGA CTGCCGTGTG GTAAACTGAT GAACCCTGAC CCATTAGGCT TTGGCTACAG 000960
000961 AATGTGGAAA TAAGTTGTGT TACTACATGT GTGTAATCCT AGGGTGCAGG ACACCGGCCG GGAGGTTCCA TAGAGTGATG 001040
001041 GGTTCTGCAG GTAACTCATC CTCTAGTCCT CTGTAAGCTC CTAGAAGGAA GAAATTATGT CCTTTAGACT AATAAAATTC 001120
001121 CTCCAAACCA AATACAGCAC CTACTGTGAA GACACAAAGA TACTTTTAGA ATAGTAAAAA CTTTATCCAT TGAGAAATTC 001200
001201 CTTAATGAAA CAGTATCCAA GAAGTCATTT GCCAGCAGAT TTCTTAGAGG TGCGATAAAG AAGAGGACAT TGCCAGTCGT 001280
001281 CACAGCAGCT GCAATAGCTC CTCTCTATTG TTAAACAGTG GGATATCTTG TGCAGGTTTT CAGTTGACAA TCAATTTTAA 001360
001361 AGATTAGTTT CGGTCCCCAT CAATCAATTA TTTATTAACC CATCAATAAA AATTTAAATG CTCTGTGAGG TACAATAGCT 001440
001441 ATTAAAAGAG ACAGAGGCAC TTTCTGTGTC CAGAGGGGCT TTTAGTCTGC TCTGGAAAGC AAGATGCGTG CAGATGAGTG 001520
001521 ACGCAGTGCA TCGTGTGGAT GCAAAGGGAG GGACTCACAT GGGAACCAGA GGAGCTACGA AGGGAGGCAG TGGGGACTGG 001600
001601 TGGGTCGAGA CCTGGAAATA ACACATGAAT AGGCAACAAA GGTTTCCTTT CCTCTTCCAT GCACTTCAGT CCTTGAAAAA 001680
001681 CGTCTTACCA CGGAATTCCA CAGCGTACCA AGCGATTCCA CAGCTTGATG GCACACTCTC CTTTCTCAGC ATTCTTGAAA 001760
001761 ATGGCGTGTG AGCCAAGCCA TCTTACTGAG AAATTACCTT AAACCATTTG ATGAACCAAA AATATTTTGT AATACCCATC 001840
001841 TCCGACATTA GGTAGGCAAA TCACACAGAA ACACCGAGGT CTTCTGAGTC ATATTTATCT GAAAAATCAC AGCTTGGGTG 001920
001921 CATGTGAAGC CAGAGGAGCA CTCCTGGGGC CTGCGGTGCC ATCACTCAGC TCCCCTGGGC TTCACATGGC CATGGAGCAC 002000
002001 CCAGCAAGTG TAGGCTCTGA GCCTTCAGGG AGGGGCGGCA TCAGCCAGCA CCATCGTCTC CTGGGTCTTG TGCCTCTTCC 002080
002081 TTGGTTGCGG TGTTGTCAGG GCCAGAATTG GGCAATTCCG GGTGACATCC AGGTGTGGCT GCTGACACGG AGCACAGCCA 002160
002161 CCTCAGGGAT GCAGGGTCCC CCACCTGGTC AAGTGCCCAG TGCTGTGTTG TCATTTGCAA GTTCTTCCTG TGACTGAACT 002240
002241 CCAAATGGCA CTGGGACTGC TGACTCCACC CACTGGACAA CCCGTGTTCT TGCTTTTGGG GTTTCTGAAA CAGCCCCAAG 002320
002321 ACTCTGGGCA TCTTGATTTT GCTCCCATTG CTTCTCAGGA CACCCTGCTC CTGTGGTTTG CAGCCCCGGC CTTCTCTTCG 002400
002401 AGGACGCCTC TGCTCTTCTG CCTCACACTC GGATTGGACC TTCTTCAGCA CAGCCAGTGG CCGAGGCTTC CTCCCTGGGG 002480
002481 CTCAGTGGAG CAGGACAGAT GCTGCATCCA AACTCTTCCA TTGGGTTCCA GTCTGTTCCA GTCATGCCCT TGAGCCTCTA 002560
002561 AAGCTCCTAG GTGAGAGACG TAGCAGCTGA CAGCACTTCC CACTTGATTT GGGTGGACTC CAGCCTCCCC AGCAACAATA 002640
002641 AGAGATCAAA AGCATCGTTG AGGAAGCAGC TTGCTGAAAC GCTGAGTGCC CGCCACTCTC AGGTCAGGTG GGACCGGCAG 002720
002721 GCCAGCATGA GTTCCTGAAC ACTTGGTTCT CAATACTGGC CACAGCCACA CTGTAAGGGG AAACAAGAGG GCACTGTATG 002800
002801 CAAACATCTC TTGAACTCTG GAGTCTGCTC ACCTTCCTGC CTCAAGCCCC TCTCCCACGT GGTCCAGTCA CCATTCTCCA 002880
002881 CAGAGACTAC CCTAAAACCC AGCGACTCTC GTGTGCCTGC AGAATGGCAC AGCCCGTTCT CATAGCAGCA CTCCTGTTTA 002960
002961 ATCAGAGGGA TGTTAACGAC CAAGTCATAT TTGCTCGATT TGTGTTCAAC ATATTTCATT TGTACCGATA AAACTTAAAA 003040
003041 ATATCCCCAC ACATGCATTG CCTATTAAAG AGTATCTTCC AGGTACACCT CCCTTACACA TCAGTTAACT TGATAATTTC 003120
003121 TTCCCATTCT TGTGCAATAA ATTTCCTTCC TGATCAGCTC TGTCCAGCAG CAACAATAAT CCACGTAGAG ACATGCAAAC 003200
003201 TAAAAGTCCG TTAGTGGAGG CACGAAGCTG ATGAGGCTTG GAAAAAAATG ACCGATTTGA TTAAAATTAG GACCCATGGG 003280
003281 AGTGGAGCTC TGCCTATTTT AGAGGCAAAG TAAATGCCTG GGAGTCCAAT CACCGACATT CTGTTTGAGG TTTCTAATCA 003360
003361 CAAGGAAGAT GGAGAAAATG CAGAACAAGT GGTCAAGAAC AGGGAGATAA TAAATAGAAT ATTTATGGGC TGAGGAAAAC 003440
003441 AATTACCAGG GGAAAGCCCA AGAAGCAAAG ATGAACAGAG AACGTGCTGA CTGCGCTCGT TTGGAAAGGC CTCATGGCCA 003520
003521 AAGGAGGAGA GGCATTATGA GGAGCAGTGA CCGAGTGGGC AGGACCCCCG GGGATCAGGA AAGGTGCACG GGGGGAAATG 003600
003601 AGAGGCCTGA GCGGCTTCCC AGCGAAGGTT TTTGAAGCAC GGTTTGATTT TCTCTCTCCC CCTCACCATC CCCAA
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Predicted Small Protein

Name NONHSAT000177_smProtein_107:382
Length 92
Molecular weight 9983.423
Aromaticity 0.0769230769231
Instability index 40.5846153846
Isoelectric point 5.29876708984
Runs 14
Runs residual 0.0203754578755
Runs probability 0.0480922098569
Amino acid sequence MEFFIPTSVDLKILPLSACLGSAVSSLPWFSDDACNNAMRFAHSWVTLVIHSGGDLTCHC
EQLLLLDDPGHRPASTYPSVLENRARLLPLC
Secondary structure LEEEELLLLLLEELLLLHHHLLLLLLLLLLLHHHHHHHHHHHHHHEEEEEELLLLLLHHH
HHHHHLLLLLLLLLLLLLHHHHHHHHHLLLL
PRMN -
PiMo -