NONHSAT000237
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT000237 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1368 nt |
Genomic location |
chr1-:1001015..1002363 |
Exon number |
1 |
Exons |
1001015..1002363 |
Genome context |
|
Sequence |
000001 CCCCCCAGGA GCAATGGGCC CAGGCCCCGC CTCCCGCACA CACCCACCCT GATGTAGTCG GCTCCGGGCC CGCTGTCATC 000080
000081 CTCGTTGAGC AGGATGACTC AAGGGTAGCA TCAACTGGGA AGGGAGGTGC CGCTCAGTTC TCCAGGGCAC AGCTCGTGGG 000160 000161 CCTCACCCTG CCTCTTTGCC CGCAGACCCT GTGGTGAGCA GAGATGGAGG GTCCAGGGTA TGCAAGGGGG AGCCTCAGGT 000240 000241 CAGCGGTGGC AGATGCTCGG CCTGCCCCCC ACCTCCCCCA GGCCCGACGG GTGACGCCCT GGCCTCCGCC CTCACAGGGA 000320 000321 AGGATGTTCT TGTAGTGATT CTTGGGCTTG TTCTCCACAC TCTGCCCCTC CTTCCGAGGG TACAGGAACC GGCATTCCTG 000400 000401 CTGCTGCAGC ATCTGGAGGT GATGGAGCCT TCAGCTCACA GCCCCGGCCC CTTCCCAGAG CCCGAGATGG CCACCCCCAG 000480 000481 CCCGTCCCGT GTGGGCGGAA GAGTACCTAG GTGCCGAGGC AAGAGACTGA AGGCACAAAC TGTTTCAGTA TAATAAAGAA 000560 000561 AATAGAATAA GAATAGTCAT AATACAAATT AGATACAGCG ATGATCATGA ACAATTATCC ATCATTATTA TAAACATTAT 000640 000641 TAATCATTAG CTTTTAATAT TACTCTGTTG CATTAATAAT ATAACCTAGG AATAACCGGC AGGTATAGGG TCAGGTGCTG 000720 000721 AAGGGACATT GTGAGAAGTG AATAGAAGGC AAGAGGGGAG CCTTCTGTCA TGCCCGCATA AGGGCCGCTT GAGGGCCCCT 000800 000801 TGGTCAAGCG GTAACGCCAG TGTCTGGGAA GGCACCCGTT ACTGAGCAGA CCGGGAAAGG GAGTCTCCTT TCCTTGGAGG 000880 000881 AGTCAGGGAA CGCTCTGCTC CACCAGCTTC TTGTGGGAGG CTGGATGTTA CCCAGGCCTG CCTGCAGTCA TCCGGAGGCC 000960 000961 TGAACCCCTC CCTGTGGTGC TTCAATGGTC ACGTTCCTTG TCCACTTTCA TGCTCCTTCC GTACTCCTGG TTCCTCTTTG 001040 001041 AAGTTCGTAG TAGATAGCGG TAGAAGAAAT AGTGAAAGTC TTAAAGTCTT TGATCTTATA AGTTCATAGA AGAAAACGCT 001120 001121 GATGCCTGCC GCCTTCTCTC TCTGCTTCAG CTACCTAAGA GGGAAGGGCC CGCTGTCCTG TGATCAGGTG ACTTGCTTCA 001200 001201 CCTTGTCAAT CACTTAGAAG ACTGACCCTC CTTATCCTGC CCCCTTGTCT TGTATGCAAT AAATATCAGC GAGCCCAGCC 001280 001281 GTTCAGGGCC ACTACCGGTC TCCGTGTCTT TGTGGTAGTG GTCCCCGGGC CCAGCTGTTT TCTCTTTAAA AAAAAAAAAA 001360 001361 AAAAAAAA |
Predicted Small Protein
Name | NONHSAT000237_smProtein_203:334 |
Length | 44 |
Molecular weight | 4683.3423 |
Aromaticity | 0.0697674418605 |
Instability index | 75.0372093023 |
Isoelectric point | 11.7052612305 |
Runs | 5 |
Runs residual | 0.0410243010191 |
Runs probability | 0.0479773891539 |
Amino acid sequence | MEGPGYARGSLRSAVADARPAPHLPQARRVTPWPPPSQGRMFL |
Secondary structure | LLLLLLLLLLHHHHHHLLLLLLLLLLLLEELLLLLLLLLLLLL |
PRMN | - |
PiMo | - |