NONHSAT000427
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT000427 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
686 nt |
Genomic location |
chr1+:2323296..2327806 |
Exon number |
2 |
Exons |
2323296..2323397,2327223..2327806 |
Genome context |
|
Sequence |
000001 TTCCCGGAGC CGGAGCGCAG CGCCTGCGGC CGCCCGTGCC CCGCCGTCCT CCTTCCCGCG GCCGTGAGGG AGACCGCGGC 000080
000081 TCGGCCGTAG CGGAGCTGCG AGTTACAGAA TGTCTGAAGG GGACAGTGTG GGAGAATCCG TCCATGGGAA ACCTTCGGTG 000160 000161 GTGTACAGAT TTTTCACAAG ACTTGGACAG GTTGGTGGGT TTTTTAGTAG ATGAGTATAA ATATTTGAAA AAGAAACGGG 000240 000241 ACTCCCAGCA TTTTCGGGAA GGATCTGTTT GCTGGTGTTC CTGATGGAGA AGTTACTTCG CCTCAGGCTC AAACTTCCTG 000320 000321 AAGACAGCGT TCTCTTCAct gtgaagggcc agctgtggag agatcgggct ctggggccac acgtggtcta tcaaacatat 000400 000401 gcgttttctg tttctgtttt ccttttacca agctttaaaa atataaaacc cagtctcagc tcccaggcag gacagatgcg 000480 000481 gccgtggCTG CCGTTCTGCT CTTGCTGTCC CTCTCCCAGC CACCCACGTC CCCGGTGCTG GTAGCCCCAC CTGCCCCGTG 000560 000561 TCAGCTCGGC GGTTCTGTCC TTGAGGGTGA GAGGCTCTTG TGTGGGCTGC GTGTGCATTG CTTGGTGAGT GAGGGACCTA 000640 000641 GAGCTGCCTT TGAACGCTGG AGTCCGAACC TCTGTCAGGA AAAGCT |
Predicted Small Protein
Name | NONHSAT000427_smProtein_143:283 |
Length | 47 |
Molecular weight | 5561.2729 |
Aromaticity | 0.152173913043 |
Instability index | 48.1543478261 |
Isoelectric point | 7.71868896484 |
Runs | 7 |
Runs residual | 0.00918737060041 |
Runs probability | 0.0302571479043 |
Amino acid sequence | MGNLRWCTDFSQDLDRLVGFLVDEYKYLKKKRDSQHFREGSVCWCS |
Secondary structure | LLLLEELLLLHHHHHHHHHHHHHHHHHHHHLLLLLLLLLLEEEEEL |
PRMN | - |
PiMo | - |