NONHSAT000732

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT000732

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

2196 nt

Genomic location

chr1+:8086798..8182763

Exon number

3

Exons

8086798..8087481,8089287..8089417,8181534..8182763

Genome context

Sequence
000001 GGGCCGAAGA AGCCCTGGAG GGGGAGAGGG GAGCCGCTCT CGACTGGGCT TGCGGCGTGG GAGGGACAGT GAGGGACACT 000080
000081 TAGGGACTGT GTGGGGCAGT GAAGGATAGT GTGGGATGAT GAGGGACCGT GTGGACCGGT GAGCGACTGT GTGGGACAGT 000160
000161 GCGGGACGAT GAGAGACGGT GTGGGACGGT GAGGGACAGT GCGGGACGAT GAGGGACAGT GAGGGACTGT GTAGGACAGT 000240
000241 GAGGGACAGT GTGGGACGGT GAGGGACTGT GTGGGACAGT GAGGGACTTT GGGACTGTGA GGGACTCGGA CAGTGAAGGA 000320
000321 TGGCAAGGGA CAGTGTGGGA CAGTATGGGA CAGTGGACAG TGAGGCACTG TGAGGGGCGG TGAGGGACAA TGAAGGATGT 000400
000401 CAAGGGACAG TGTGGGACAG TGGACGGTGA GGTACTGTGA GGGGCGGTGA GGGACAGTGT GGGACTGTGA GGGATGGCGA 000480
000481 GGGACAGAGT AGGACAGCAA GGGAGGATGA GGGGACAGAG TGGGCCGGCG TGGGGCGGTG AGGCTACGCG GGGGGAACCC 000560
000561 AGGGCTCCTC TGACTGCTTT GGAATATGGA GGAAAGGTCC TGCTCGAGGT TGAGCCCTTC AGGGTCGCTG TGGGTTTCCA 000640
000641 GGAGGAGCTC CCTCACTACT GACTTAGGGG GCCCTCGGCT TCCCAGTGTA AGAAGAAGCT GTCTTTGGAG TGAGAACAAG 000720
000721 GGTGAGGTTC TGGCTCAGAA ACCTTAGAAT CACAGACACT GTTTTCCTGA AAACATTGCT TCTTTCTCTC ATCTCAAAGA 000800
000801 AATGCCACAA GTCGTGTGTT TCCCCACTGC GAGCCCTTCG AGAACAATGT CATGTTGATC GATGGCAGTG ACTCACACCA 000880
000881 GACCTTTCCA TGCCTCCTCT GCAAGGACTC AAGAGAGTCG AGAGCAAAAC CGTGCCATAG TTCCATAAGG AGGGCAAAGA 000960
000961 GCTTTATCCA CGCTGAGGAA CAGGCGGATC ATGCGGCTAC AGCACTGGTC TTTACCTTTT AACTGCTTGA TTCGAAACAT 001040
001041 TCCAGCCAGG AACAGTGGCT CACACCTGTA ATCCCAGCAC TTTGTGGGGC CAAGGCAGGT GGATTGCTTG AGCTCAGGAG 001120
001121 TTCGAAACCA GCCTGGGCAA CCTGGCAAAA CCTCATCTCT ACAAAAAAAT ACAAAAATTA GCCAGACCTG GTGTGTGTGC 001200
001201 CTGTGGTTCC AGCCACTCGG CAGGCTGCGG CCAGAGGATC ACTTGAGCCC AGGAAGTGGA GGCTGCAGTG AGCTGAGATC 001280
001281 GTGCCGCCAC ACTCCAGCCT GGGTGACAGA GCCAGACATT GTCTCTAAAA AAAAAAAAAA AGAAAAGAAA AGAAAGAAAA 001360
001361 AAGAGAAATA GTCCAAGACT AGGGAGAAAA CCTTCTTTGG GGTCAGTGTG AACCATTCTT TCATTTGTTC AGCAAATGCT 001440
001441 TACTGAGGAG CTACTGTGTC CCTGAAATTG CCTCCACCTC CAAGAAGACA GTGGTGAGCA AGTCAGACAA TACCTCTAAT 001520
001521 CTCATGGTAT TTATAAGTAA ATGGGCCGTT AAAATTACCA GATCAGAAGT GCTGTGTTCA GCAAATAGAG GCTCATGGGA 001600
001601 AACTCCTAAG AAGGGCTTCT GAGCTGGACT TGGGGGTCAG GAAAGGCAGA ATGAGGGGGC TGACTCATCC AGACTGGGGC 001680
001681 GGGGTTGGCG GGGGTGCCTC CCACTTACTA TCTGTCTCCT TCTAGACTGA CTTCTCTGTC ATCATGAATA CACCCCTTTA 001760
001761 AGACATACAT TTAAGAGAAA ATAAGAGGAT GCCTTATTTA TTTAAAGGTT TGTTACATTT TTACTAACAA CCACATACCT 001840
001841 AAAGGAAAGT CGCAAGTAGA GCTCAAAAAC ATTTTTCTCT GGGGCAGTGA AGAGTCAGTT GCCAGCCAGA AGGCCCACTG 001920
001921 AGCCTGAGCA CTTCAGGGTG TGCTTCCTAC AGATAAGGAC ATCCTCCTGC ATAACAGGAA AGGGGTCCTG ATCCAGACCC 002000
002001 CAAGAGAGGG TTCTTGGATC TCGCACAAGA AAGAATTCCG GGTGAGCCAA CAACTTAATA TGACTAGCTT ACACAATAGC 002080
002081 TTTTATAGTA AAGATACCTC TTTACGGACT CCACTTATGA CTCCCTAAAG CCCATGTCGA AGCCCCCATC GCTGGGTCAA 002160
002161 TAGTACTTGC CGCAGTACTC TTAAAACTAG GCGGCT
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Predicted Small Protein

Name NONHSAT000732_smProtein_473:661
Length 63
Molecular weight 6810.6094
Aromaticity 0.0806451612903
Instability index 42.7548387097
Isoelectric point 6.55865478516
Runs 9
Runs residual 0.00847926267281
Runs probability 0.0234155724352
Amino acid sequence MARDRVGQQGRMRGQSGPAWGGEATRGEPRAPLTALEYGGKVLLEVEPFRVAVGFQEELP
HY
Secondary structure LLLLLLLLLLEELLLLLLLLLLLLLLLLLLLLLHHHHLLLEEEEEELLEEEEEEEEEELL
LL
PRMN -
PiMo -