NONHSAT000732
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT000732 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
2196 nt |
Genomic location |
chr1+:8086798..8182763 |
Exon number |
3 |
Exons |
8086798..8087481,8089287..8089417,8181534..8182763 |
Genome context |
|
Sequence |
000001 GGGCCGAAGA AGCCCTGGAG GGGGAGAGGG GAGCCGCTCT CGACTGGGCT TGCGGCGTGG GAGGGACAGT GAGGGACACT 000080
000081 TAGGGACTGT GTGGGGCAGT GAAGGATAGT GTGGGATGAT GAGGGACCGT GTGGACCGGT GAGCGACTGT GTGGGACAGT 000160 000161 GCGGGACGAT GAGAGACGGT GTGGGACGGT GAGGGACAGT GCGGGACGAT GAGGGACAGT GAGGGACTGT GTAGGACAGT 000240 000241 GAGGGACAGT GTGGGACGGT GAGGGACTGT GTGGGACAGT GAGGGACTTT GGGACTGTGA GGGACTCGGA CAGTGAAGGA 000320 000321 TGGCAAGGGA CAGTGTGGGA CAGTATGGGA CAGTGGACAG TGAGGCACTG TGAGGGGCGG TGAGGGACAA TGAAGGATGT 000400 000401 CAAGGGACAG TGTGGGACAG TGGACGGTGA GGTACTGTGA GGGGCGGTGA GGGACAGTGT GGGACTGTGA GGGATGGCGA 000480 000481 GGGACAGAGT AGGACAGCAA GGGAGGATGA GGGGACAGAG TGGGCCGGCG TGGGGCGGTG AGGCTACGCG GGGGGAACCC 000560 000561 AGGGCTCCTC TGACTGCTTT GGAATATGGA GGAAAGGTCC TGCTCGAGGT TGAGCCCTTC AGGGTCGCTG TGGGTTTCCA 000640 000641 GGAGGAGCTC CCTCACTACT GACTTAGGGG GCCCTCGGCT TCCCAGTGTA AGAAGAAGCT GTCTTTGGAG TGAGAACAAG 000720 000721 GGTGAGGTTC TGGCTCAGAA ACCTTAGAAT CACAGACACT GTTTTCCTGA AAACATTGCT TCTTTCTCTC ATCTCAAAGA 000800 000801 AATGCCACAA GTCGTGTGTT TCCCCACTGC GAGCCCTTCG AGAACAATGT CATGTTGATC GATGGCAGTG ACTCACACCA 000880 000881 GACCTTTCCA TGCCTCCTCT GCAAGGACTC AAGAGAGTCG AGAGCAAAAC CGTGCCATAG TTCCATAAGG AGGGCAAAGA 000960 000961 GCTTTATCCA CGCTGAGGAA CAGGCGGATC ATGCGGCTAC AGCACTGGTC TTTACCTTTT AACTGCTTGA TTCGAAACAT 001040 001041 TCCAGCCAGG AACAGTGGCT CACACCTGTA ATCCCAGCAC TTTGTGGGGC CAAGGCAGGT GGATTGCTTG AGCTCAGGAG 001120 001121 TTCGAAACCA GCCTGGGCAA CCTGGCAAAA CCTCATCTCT ACAAAAAAAT ACAAAAATTA GCCAGACCTG GTGTGTGTGC 001200 001201 CTGTGGTTCC AGCCACTCGG CAGGCTGCGG CCAGAGGATC ACTTGAGCCC AGGAAGTGGA GGCTGCAGTG AGCTGAGATC 001280 001281 GTGCCGCCAC ACTCCAGCCT GGGTGACAGA GCCAGACATT GTCTCTAAAA AAAAAAAAAA AGAAAAGAAA AGAAAGAAAA 001360 001361 AAGAGAAATA GTCCAAGACT AGGGAGAAAA CCTTCTTTGG GGTCAGTGTG AACCATTCTT TCATTTGTTC AGCAAATGCT 001440 001441 TACTGAGGAG CTACTGTGTC CCTGAAATTG CCTCCACCTC CAAGAAGACA GTGGTGAGCA AGTCAGACAA TACCTCTAAT 001520 001521 CTCATGGTAT TTATAAGTAA ATGGGCCGTT AAAATTACCA GATCAGAAGT GCTGTGTTCA GCAAATAGAG GCTCATGGGA 001600 001601 AACTCCTAAG AAGGGCTTCT GAGCTGGACT TGGGGGTCAG GAAAGGCAGA ATGAGGGGGC TGACTCATCC AGACTGGGGC 001680 001681 GGGGTTGGCG GGGGTGCCTC CCACTTACTA TCTGTCTCCT TCTAGACTGA CTTCTCTGTC ATCATGAATA CACCCCTTTA 001760 001761 AGACATACAT TTAAGAGAAA ATAAGAGGAT GCCTTATTTA TTTAAAGGTT TGTTACATTT TTACTAACAA CCACATACCT 001840 001841 AAAGGAAAGT CGCAAGTAGA GCTCAAAAAC ATTTTTCTCT GGGGCAGTGA AGAGTCAGTT GCCAGCCAGA AGGCCCACTG 001920 001921 AGCCTGAGCA CTTCAGGGTG TGCTTCCTAC AGATAAGGAC ATCCTCCTGC ATAACAGGAA AGGGGTCCTG ATCCAGACCC 002000 002001 CAAGAGAGGG TTCTTGGATC TCGCACAAGA AAGAATTCCG GGTGAGCCAA CAACTTAATA TGACTAGCTT ACACAATAGC 002080 002081 TTTTATAGTA AAGATACCTC TTTACGGACT CCACTTATGA CTCCCTAAAG CCCATGTCGA AGCCCCCATC GCTGGGTCAA 002160 002161 TAGTACTTGC CGCAGTACTC TTAAAACTAG GCGGCT |
Predicted Small Protein
Name | NONHSAT000732_smProtein_473:661 |
Length | 63 |
Molecular weight | 6810.6094 |
Aromaticity | 0.0806451612903 |
Instability index | 42.7548387097 |
Isoelectric point | 6.55865478516 |
Runs | 9 |
Runs residual | 0.00847926267281 |
Runs probability | 0.0234155724352 |
Amino acid sequence | MARDRVGQQGRMRGQSGPAWGGEATRGEPRAPLTALEYGGKVLLEVEPFRVAVGFQEELP HY |
Secondary structure | LLLLLLLLLLEELLLLLLLLLLLLLLLLLLLLLHHHHLLLEEEEEELLEEEEEEEEEELL LL |
PRMN | - |
PiMo | - |