NONHSAT000958
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT000958 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
1036 nt |
Genomic location |
chr1-:12639796..12676700 |
Exon number |
2 |
Exons |
12639796..12640694,12676564..12676700 |
Genome context |
|
Sequence |
000001 CGGCTGCAGC TCTGAAGACA CGAGAGAGGG TACTTGGTTT GGGTTTGAAA AGGGAAGAGC GGTCTTGTAT GCAGTAGTCT 000080
000081 GGCCGGACCG ACACTGAGAG GCCCAGGTGT TTGGAAAGCA GGAAAGAGGA GGCCAGGATT GTTCTCTGGG GCCGGACTGA 000160 000161 GAAATGCCTG AAGGAGACGA CGGAGGAGAT CCGGCAGATG GGCACTGAGT GCCATTACTT CATCTGTGAT GTGGGCAACC 000240 000241 GGGAGGAGGT GTACCAGACG GCCAAGGCCG TCCGGGAGAA GGTCTGTAGC CTGGGAGGGT CTATTCCTAG CACAGCTGAC 000320 000321 CACAGGCTAA TTCCGGGCAA AGAGAACATT CTCATGTGGC CTGGAAGAGA GCTCTGCTTA TGGCAGAATG GCTTTGCCCG 000400 000401 GGGCACCTTT GGGGACTCTC CCATGAAGCT GGCCCCAGTT ACATAGGCAG GGATTAGGGT TGATTACGTA ACAGGCGTAA 000480 000481 TCATCTGTTG TTCCCTTGGA AATGTAGACC GTGTGGGTTT CTCTCCAGGA CTGTGGCGGG GCAAATGTCC CATTGGCCTC 000560 000561 TGGGAAAATC CTTCTGACTC CAGTCATCTG TTTGGGCTAA ATATATCAGT GACCTCCAAG AGAGGGAAAC CCACCCTGAC 000640 000641 TGTCTGGCAC GTGGTAATGT TAACTGTTTT TATGTCGCAG TAAACTcatt tattataaat atgccgtgtg ccaggtacgg 000720 000721 tgtgtgccat aaattatttc tcctcctcag aacagtcctg gtgcggcatt agccccatct cacaaatcaa gactggcgct 000800 000801 cagagacgca gttctcttcc ccaggccctg tggctgctgg tggtacggcc aggTGGCTGC TGGGCCTCTA TGTATGCAGG 000880 000881 ATAACTGGAA CTAGGCTGGC AGAAAGTGGC CTGCGGGAAG GAATATCTAA GAAAAACTTG TAAATAACAC ATCAATTGAT 000960 000961 TGATCATAAA TGGACTCAGA AATTACTCGT TCACTTAGGA GTAAGCCATA TCCCTTTTAA AAAGTATATT Ggaccg |
Predicted Small Protein
Name | NONHSAT000958_smProtein_197:445 |
Length | 83 |
Molecular weight | 9086.3581 |
Aromaticity | 0.0853658536585 |
Instability index | 49.2231707317 |
Isoelectric point | 6.70330810547 |
Runs | 11 |
Runs residual | 0.00175535846268 |
Runs probability | 0.0369273016332 |
Amino acid sequence | MGTECHYFICDVGNREEVYQTAKAVREKVCSLGGSIPSTADHRLIPGKENILMWPGRELC LWQNGFARGTFGDSPMKLAPVT |
Secondary structure | LLLEEEEEEELLLLLHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLEEELLLLEEE EEELLEEELLLLLLLLLLLLLL |
PRMN | - |
PiMo | - |