NONHSAT001088
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT001088 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
848 nt |
Genomic location |
chr1-:16492722..16504053 |
Exon number |
2 |
Exons |
16492722..16493237,16503722..16504053 |
Genome context |
|
Sequence |
000001 CCCTCCTATC CCTGCATGAA TCCTGGCATG ACCCCGGACA CCCAAGAAAG TGCACCTTTG ACAATGGTGC ACCAGGTCAT 000080
000081 GGTGGCACCT CTCCCCTTGG TGGTGGCATC TGGGGCCCTT GCACACAGGG GACAAGGAAC CTGAAGTGAA GGGGAGTTGA 000160 000161 CCTATTGAGG CCACACTGAG GACAGTCCCT CTCACTTTGG GAGAGGAGAT GGCACTCCTG GTCTGATGTT CCAGAATTCC 000240 000241 TCTCCATGGA AGGAGAGGAG AACACCATAA CATATTAGAG CAGAGAGGGG ATCCGCGGCA AAGGCAAGGC TTCTGTTACA 000320 000321 AAGATGGGGA AAGAGTTTTC CAGTCGTGTA TTTATTTTTG AGCAGGCCAT TGATGCCTAT GGTGCAACAG ACCACAGGGA 000400 000401 GAATACACAG GGAAGCTGCT GTGCCCCCCA CCAAGAGGTT CCCAGTCTTC CTGTCCCCAA CCCCTCCCCA GCTCCTCATC 000480 000481 CAGGTCCCTT GCCCTCTGCT CAGCACAAGG CATGCTGGCG GCCACAGACA TATCTACTGA CATGAACACA CGCCCCCCAC 000560 000561 CTACACTGCG CTGGCTGGGG GATACCACAG GGGCCTAACT AGGGAACATG TGAAAGGTGG CAAGAATGGA CAAGTGGCCT 000640 000641 GTGGCATGAT GGATGGGCTG GCAGACAGAT GGATGGATGG GTTGGTAGAC AGACAGACAG ATGGAGCCGC TAGGAGGTGA 000720 000721 CTACCTGGCT GGGGAGGCCT GTCTGAGAAG TGATGGATGG GATGCAGAGG GGGCTGAGAG GGGCTGGGCC AAGGTGGGAA 000800 000801 GGAAGGAAGA AGGAAGGAAG GAAGGATGGA TGGCTGGATG GATGGATG |
Predicted Small Protein
Name | NONHSAT001088_smProtein_323:544 |
Length | 74 |
Molecular weight | 7998.8943 |
Aromaticity | 0.0821917808219 |
Instability index | 71.2328767123 |
Isoelectric point | 6.37774658203 |
Runs | 10 |
Runs residual | 0.00715863897481 |
Runs probability | 0.0255873520579 |
Amino acid sequence | MGKEFSSRVFIFEQAIDAYGATDHRENTQGSCCAPHQEVPSLPVPNPSPAPHPGPLPSAQ HKACWRPQTYLLT |
Secondary structure | LLLEELLEEEEHHHHHHHLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHH LLLLLLLLEEELL |
PRMN | - |
PiMo | - |