NONHSAT001105
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT001105 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
1296 nt |
Genomic location |
chr1+:16693583..16722607 |
Exon number |
4 |
Exons |
16693583..16693803,16717870..16717919,16721533..16721565,16721616..16722607 |
Genome context |
|
Sequence |
000001 AAGATGGCTG CCCTAATGTA CACTTGGGAC CTTGCCTGGC GCCTCTTCCG GGCTTGGCAG CGGGCGGGGT CCATTGAGTA 000080
000081 AAGCCTTGCG TGCCTGCGCC CGCGACGGAG GCGCGCTTCA AAGCGCAGGC GCGGGGAGGG GGTGGGGGAG GAGGGAAAGC 000160 000161 GGCGAGTAAG ATGGAAGATG AGGAGGTCGC TGAGAGCTGG GAAGAGGCGG CAGACAGCGG GGAAATAGAC AGACGGTTGG 000240 000241 AAAAAAAACT GAAGATCACA CAAAAAGAGA GGCCAACCAG GATCTCCCAA CCCGAAGACA GCAGGCTTCA AACAGCGCAG 000320 000321 ATAAATGCAG GCAAGAAAAG ATGCCGCCGT TGCTGCCGTC ACCGCCTCCT GGGTCGTCCG CCACGGGTTG CACTGCCGTG 000400 000401 GCAGACAGCT GGACTTGAGC AGAGGGAACG ACCTGACTTA CTTGCACTGT GATCCCCCTT GCTCCGCCCA CTGTGACCTT 000480 000481 GAACCCCATG CACTGTGACC TCCCCCCTTC TCCCCCTTCC CACTGTGATT GGCACATCGA CAAGGGCTGT CCCAAGTCAA 000560 000561 TGGAAAGGGA AAGGGTGGGG GTTAGGGGAA GGTTGGGGGG ACCCAGCAAG GACTCAGAGA GTCAGACAGT GCCACTTGGC 000640 000641 CACTTGGGGT AAAGCCAGTG CCAGCAATAA CAGTTTATCA TGCTCATTAA TTTGGGATTT CAAAACACAA ATGAAAACTC 000720 000721 ACACCCACCC ACCCCCAAGT GCATGTCTCC ATCACTTAAA AAGTAAGTTC CATTTGAAAA TATCCTTTCT TTTTTTTTTC 000800 000801 TTCCTATTTT TGTTTGTTTA TACAAATATC TGATTTGCAA GAAAAAGTGC ATGGGAGGGG TTTTAGTGGT TTAATGAATT 000880 000881 TTTAATTAAG AAAGGGTAGT TTGGTAGTCT ACTTAAAAAT GTTTCTGGGA AATTCACTAG AAACATTAAC CAATAGGATT 000960 000961 TTGGTGAGCT TAGCTTCTGT ATTCCTACTG CCGCCCAGAA AAGGGGCAGG GCTCTGCAGC CGCCAGGACA GACGAGCACC 001040 001041 CCATGCCTAT ACCTCCCTCC CCGAGCTAAG TCCCAGGGCA TCTGGGCCTT GCCTGGAGAC TGGGCTAGCT CTGTAGGCTC 001120 001121 GGAGAGCCTG GGGAGGGTGC CAACCCCACC TCTAGTATTT TGGGAGATAG GGAAAGTGAA CCGACTTCCC CTTCCCATAC 001200 001201 CCCTCAGGGT GGTTCCCTAC CAGCCAGGCT TACTACTTCT AGAAGAAAGC AGAGTGCCAG GGAGTGAGAT TGCATCCCTG 001280 001281 GGCTTAGAAG TGACGG |
Predicted Small Protein
Name | NONHSAT001105_smProtein_170:451 |
Length | 94 |
Molecular weight | 10846.2283 |
Aromaticity | 0.0215053763441 |
Instability index | 62.3086021505 |
Isoelectric point | 8.98345947266 |
Runs | 11 |
Runs residual | 0.0126443647949 |
Runs probability | 0.0495896966485 |
Amino acid sequence | MEDEEVAESWEEAADSGEIDRRLEKKLKITQKERPTRISQPEDSRLQTAQINAGKKRCRR CCRHRLLGRPPRVALPWQTAGLEQRERPDLLAL |
Secondary structure | LLHHHHHHHHHHHHLLLLHHHHHHHHLLLLLLLLLLLLLLLLLLHHHHHHHHHLLLHHHH HHHLLLLLLLLEELLLLLLLLLLLLLLLLLLLL |
PRMN | - |
PiMo | - |