NONHSAT001313
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT001313 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
677 nt |
Genomic location |
chr1+:19923477..19950284 |
Exon number |
4 |
Exons |
19923477..19923603,19927281..19927465,19948594..19948641,19949968..19950284 |
Genome context |
|
Sequence |
000001 GACTTTCAGG GGTCGGAGCG CGGGGGCCGG CCGAGAGGAA AGCTGGAGGC GCGGGTGGGG AACATGTCTG AGTCGGAGCT 000080
000081 CGGCAGGAAG TGGGACCGGT GTCTGGCGGA TGCGGTCGTG AAGATAGaga tggggtttca ccatgttgcc caggctggtc 000160 000161 ttgaactcag ggtccaaacg atccacctac cttggcctcc caacgtgcca ggattacagg catgagccac cacacctggt 000240 000241 cCATCTTGAT AATTTCATAC TCTGGCTTGG CAAAGACTGA AGGGAAGCCA TGGTGAATGC ACAGCAACTT CTGTACTGGT 000320 000321 TTTGGATTAG GAATTGTTTT CTCACTTACC TTCTTTAAAA GAAGAATGTG GCCATTAGCC TTCGGTTCTG GCATGGGATT 000400 000401 AGGAATGGCT TATTCCAACT GTCAGCATGA TTTCCAGGCT CCATATCTTC TACATGGAAA ATATGTCAAA GTATGTACAG 000480 000481 AATATATATT TCTCTTTCCT TCAGAAGAAA AAGATTTCTC CTGAGCCCTG AAGAATTCTT TAGACTGTTT GTAATGAGTA 000560 000561 AACCATGTGT GTCATTGTGG CACCACTCTC AGATACTAAT TGCTCTTTGG CCTTCAGTGA TGTCATCACT GCTTTGGTGC 000640 000641 TAAAGTCTCC CCTGTGCCTT CAGATGCGTA TGTACGT |
Predicted Small Protein
Name | NONHSAT001313_smProtein_296:523 |
Length | 76 |
Molecular weight | 8603.9042 |
Aromaticity | 0.2 |
Instability index | 43.824 |
Isoelectric point | 7.74822998047 |
Runs | 12 |
Runs residual | 0.0110638297872 |
Runs probability | 0.0465465465466 |
Amino acid sequence | MHSNFCTGFGLGIVFSLTFFKRRMWPLAFGSGMGLGMAYSNCQHDFQAPYLLHGKYVKVC TEYIFLFPSEEKDFS |
Secondary structure | LLLLLLLLLLLEEEEEHHHHHHLLLHHHHLLLLLLEEEELLLLLLLLLLHHHLLLEEEEE EEEEEEELLLLLLLL |
PRMN | - |
PiMo | - |