NONHSAT001372
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT001372 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
757 nt |
Genomic location |
chr1-:20805123..20806824 |
Exon number |
2 |
Exons |
20805123..20805844,20806790..20806824 |
Genome context |
|
Sequence |
000001 GGAATATAAA TCTTTTAAAT ACACTATAGC ATCAGgcaga gtcaagagga gtctctaccc gcttctaatc agattgccAG 000080
000081 AAGTCTTCCT TTTCTGGATG GAGACTAAGA GGTACTTACT TCTCGCCCTG GGAAGGGAAG ATCTTGGCTT TCTGCTTGGA 000160 000161 TCACTTCCTT CAAGAAGACC TCCTCAAGTt tctttcattg gacaaatatc aatttagcac ctactatgtg cctggtactg 000240 000241 tgctaggcta tctgggtata ccatggtgaa caaaatggaT GTTTTTCCTG AGCTTGAAAA TGATGATTCT TCCTATGGAA 000320 000321 ATGAGGTTGG GATCTAGGGG CTTGGATACC CCCCACATCA GAAGCTCAAA TCCTTCATAA ATGGCAAAAA AGGGGAATCA 000400 000401 AAGATAGCTA GGTTTTGAGG ATTACCTAAA GCCCAGACAG ATGACTCACT Gtttaaaatg taaactttta gaatagtttt 000480 000481 agacttacag aaaagttttg cagatagtac agaattgcca tataccccaa cccagtttct cctattgtta acacctgaca 000560 000561 ttgctgcggt acattttcca caacactggt atgttattgt taactaaact ctgtagttta tttggatttt attagttttt 000640 000641 acccaccatc ctttctctgt tccacagggt ctctcacatt gtatgcagcc atcttatttc cctaggctgc tcttggctgt 000720 000721 ggtagtttct cagactttcc ttgcttttga tggactg |
Predicted Small Protein
Name | NONHSAT001372_smProtein_278:379 |
Length | 34 |
Molecular weight | 3794.5574 |
Aromaticity | 0.0606060606061 |
Instability index | 59.3727272727 |
Isoelectric point | 10.7366333008 |
Runs | 7 |
Runs residual | 0.0279973649539 |
Runs probability | 0.0172988114165 |
Amino acid sequence | MFFLSLKMMILPMEMRLGSRGLDTPHIRSSNPS |
Secondary structure | LEEHHHHHEELLHHHLLLLLLLLLLLLLLLLLL |
PRMN | - |
PiMo | - |