NONHSAT001445
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT001445 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intronic(AS) |
Length |
771 nt |
Genomic location |
chr1+:22224591..22229880 |
Exon number |
3 |
Exons |
22224591..22224719,22226494..22226614,22229360..22229880 |
Genome context |
|
Sequence |
000001 GAATTCATCA CCTATGAATT CCAGTCACTC TGTGAAGATG ACTTGCTTTG GGGAGGCACT ACCTACCTCT GTGCAATCTA 000080
000081 TAAGCATCTC CTGTCCTAGG CTGTGAGCTC CCTGGATGGG GGAGTGGCTG CAGCATGTGC CTCAGGTCCC AAGGAGGGCC 000160 000161 ATTAGCAGCT CCAAGGTCAG AAATAGAACC CAGGTTTCCT GCCCTCCAGC CCGTCTCCGG CGGTGAGGGA GCCCGGCTTC 000240 000241 CTCCCAGAGG TAACTTTAGT GAGTCTCTAC TGTATGCACT GGGCATCCAC ACCCACCATC TCAGTCCATG TGAACAACAC 000320 000321 GTGGAAGGCA GTGACTTTGA TCTGTTTTGA GCATTGCTGC AACTCCACAA CAGAAAACAC ACAGTAGGTA CTAATAAATC 000400 000401 TGCGGACTCA CGGACAAACC AAATGAATGA ACCTGCCCAA CAGCCCTGAG GTGGAAATTA ACCCACCTGA CAGAAGAAAG 000480 000481 CTAACTTCAG AAGGAGACTT GCCCAAGATT ACACAGCTTG AAAGTGCCAG AATTACCTCT AGTCCTCAGT TCCCATTAAT 000560 000561 ACGACAGAGG CCATAACACT TCATCCTAAG GGAAAGAGGG GACTAGGTCA CACGGGCCCT GAAATCCGTT CCAAGACACC 000640 000641 CCTGTCCCTG CAGAACAATC CCTCCAAGAA TTAGTTCTCT CCGCTATGAA ATGGGAGCAA AAGGCCGGGC ATGGTGGCTC 000720 000721 ACGCCTGTAG TCCCCGCACT TTGGGAGGCA GAGGCAGGCG GATCACCTGA G |
Predicted Small Protein
Name | NONHSAT001445_smProtein_134:349 |
Length | 72 |
Molecular weight | 7682.5623 |
Aromaticity | 0.0704225352113 |
Instability index | 78.561971831 |
Isoelectric point | 5.68157958984 |
Runs | 7 |
Runs residual | 0.0499629355078 |
Runs probability | 0.0412849824614 |
Amino acid sequence | MCLRSQGGPLAAPRSEIEPRFPALQPVSGGEGARLPPRGNFSESLLYALGIHTHHLSPCE QHVEGSDFDLF |
Secondary structure | LEELLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHLLLLLLLLLLL LEELLLLLLLL |
PRMN | - |
PiMo | - |