NONHSAT001702
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT001702 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
1241 nt |
Genomic location |
chr1+:25599040..25655412 |
Exon number |
10 |
Exons |
25599040..25599186,25611065..25611250,25617133..25617282,25627438..25627584,25628012..25628177,25629814..25629950,25633088..25633220,25643492..25643570,25648381..25648453,25655390..25655412 |
Genome context |
|
Sequence |
000001 TGAGCTCTAA GTACCCGCGG TCTGTCCGGC GCTGCCTGCC CCTCTGGGCC CTAACACTGG AAGCAGCTCT CATTCTCCTC 000080
000081 TTCTATTTTT TTACCCACTA TGACGCTTCC TTAGAGGATC AAAAGGGGCT CGTGGCATCC TATCAAGTGG CCAAGATCTG 000160 000161 ACCGTGATGG CGGCCATTGG CTTGGGCTTC CTCACCTCGA GTTTCCGGAG ACACAGCTGG AGCAGTGTGG CCTTCAACCT 000240 000241 CTTCATGCTG GCGCTTGGTG TGCAGTGGGC AATCCTGCTG GACGGCTTCC TGAGCCAGTT CCCTTCTGGG AAGGTGGTCA 000320 000321 TCACACTGTT CAGATTCGGC TGGCCACCAT GAGTGCTTTG TCGGTGCTGA TCTCAGTGGA TGCTGTCTTG GGGAAGGTCA 000400 000401 ACTTGGCGCA GTTGGTGGTG ATGGTGCTGG TGGAGGTGAC AGCTTTAGGC AACCTGAGGA TGGTCATCAG TAATATCTTC 000480 000481 AACCAGACTA CCACATGAAC ATGATGCACA TCTACGTGTT CGCAGCCTAT TTTGGGCTGT CTGTGGCCTG GTGCCTGCCA 000560 000561 AAGCCTCTAC CCGAGGGAAC GGAGGATAAA GATCAGACAG CAACGATACC CAGTTTGTCT GCCATGCTGG CGCCCTCTTC 000640 000641 TTGTGGATGT TCTGGCCAAG TTTCAACTCT GCTCTGCTGA GAAGTCCAAT CGAAAGGAAG AATGCCGTGT TCAACACCTA 000720 000721 CTATGCTGTA GCAGTCAGCG TGGTGACAGC CATCTCAGGG TCATCCTTGG CTCACCCCCA AGGGAAGATC AGCAAGCTTA 000800 000801 TGTGCACAGT GCGGTGTTGG CAGGAGGCGT GGCTGTGGGT ACCTCGTGTC ACCTGATCCC TTCTCCGTGG CTTGCCATGG 000880 000881 TGCTGGGTCT TGTGGCTGGG CTGATCTCCG TCGGGGGAGC CAAGTACCTG CCGGGTGTTG TAACCGAGTG CTGGGGATTC 000960 000961 CCCACAGCTC CATCATGGGC TACAACTTCA GCTTGCTGGG TCTGCTTGGA GAGATCATCT ACATTGTGCT GCTGGTGCTT 001040 001041 GATACCGTCG GAGCCGGCAA TGGCATATTG GCTTCCAGGT CCTCCTCAGC ATTGGGGAAC TCAGCTTGGC CATCGTGATA 001120 001121 GCTCTCATGT CTGGTCTCCT GACAGTTTGC TCCTAAATCT TAAAATATGG AAAGCACCTC ATGAGGCTAA ATATTTTGAT 001200 001201 GACCAAGTTT TCTGGAAGTT CCTCATTTGG CTGTTGGATT T |
Predicted Small Protein
Name | NONHSAT001702_smProtein_494:679 |
Length | 62 |
Molecular weight | 6484.5392 |
Aromaticity | 0.0819672131148 |
Instability index | 56.8393442623 |
Isoelectric point | 4.74908447266 |
Runs | 11 |
Runs residual | 0.0275108347466 |
Runs probability | 0.0271876154229 |
Amino acid sequence | MNMMHIYVFAAYFGLSVAWCLPKPLPEGTEDKDQTATIPSLSAMLAPSSCGCSGQVSTLL C |
Secondary structure | LLLHHHHHHHHHHLLLHHHHLLLLLLLLLLLLLLEEEELLHHHLLLLLLLLLLLEEEEEE L |
PRMN | - |
PiMo | - |