NONHSAT001711
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT001711 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
945 nt |
Genomic location |
chr1-:25661859..25664681 |
Exon number |
2 |
Exons |
25661859..25662326,25664205..25664681 |
Genome context |
|
Sequence |
000001 AGCTGGACGT CGGGAGTGCT AGTTTGGAGT ACGCCATTTG AGAGTAGGCG TGAGAAGTTG CTCTGTGTGC TGAGCGTTCT 000080
000081 AAAGGAAGGC GTCCGTTGGC CTTCGTACCC GTCTTGAGTG AGGTGACGAG TGTTTTCTAG TACTGGGGTC GGCCGCGCAG 000160 000161 CCCTCTCAGG GGTGGGTGGC AGGAAGAGTG CCGGGTCCCG CGTGGTGCAA AAGGTGGGTT CAGGTTTGCG GCCACACAGC 000240 000241 GCTACTCAGG ACTTTTTAGT CTTGTTTATT TTCTCCGTGC CTGTTCCCGC CCCCCGCAGC TCCACCTCTG GGAGAGGGGC 000320 000321 GGGTTCAGCT CCAGGAGGCG GGGACTTCCC GGCTTGGCGT GGCTGGGGTG TCCCGTGGAC CCCAGTCTCG GCGCGGTGAC 000400 000401 CCACTTATGG GACTTGGCCT TTCTTTGTTG TTTGTTTAAG Gcagggtttc tcagcctggg cactactgag gttttgggca 000480 000481 acaggtgaga ctctgtctca aaaaaaaaaa aacaaGTGTG GATTACAGTA Tctgttgggc ctactatcgt aaaacacata 000560 000561 cacatgcatg tgcacacaca aacctccagg ctatcacttc agtgccagcc agcagcattt cttactctaa ccactgcaac 000640 000641 tgtgtccctg cttcatcttg gggcttcatt ctcatatatt ttcttcacac agcagccaca gagaagcttt tacaatgtaa 000720 000721 accagagtct attacttctg ttctccaact acttcagtgg ctaaattggt accagtagag tggggtgctg ccgtagatac 000800 000801 tcaaaaatgg gtatgtgact ttggaactgg gtaacaggca gggtttggaa cagtttggag ggctcagaag aagacaggca 000880 000881 aatgtgggaa agtttggaac ttcctagaga cttgttgaat ggctttgccc aaaatgctga tagca |
Predicted Small Protein
Name | NONHSAT001711_smProtein_563:763 |
Length | 67 |
Molecular weight | 7474.4437 |
Aromaticity | 0.151515151515 |
Instability index | 51.0895454545 |
Isoelectric point | 9.18646240234 |
Runs | 10 |
Runs residual | 0.000907276356379 |
Runs probability | 0.0660219042572 |
Amino acid sequence | MHVHTQTSRLSLQCQPAAFLTLTTATVSLLHLGASFSYIFFTQQPQRSFYNVNQSLLLLF SNYFSG |
Secondary structure | LEEEEELLLLLLLLLHHHHHHHHHHHHHHHHHLLLEEEEEEELLLLLEEEHHHHHHHHHH HHHLLL |
PRMN | LLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLLL LLLLLL |
PiMo | iiiiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTooooooooooooooooooooo oooooo |