NONHSAT001828

From LncRNAWiki
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

NONHSAT001828

Source

NONCODE4.0

Same with

,

Classification

sense

Length

853 nt

Genomic location

chr1+:26799002..26802059

Exon number

6

Exons

26799002..26799118,26799974..26800076,26800194..26800223,26800576..26800626,26801063..26801158,26801604..26802059

Genome context

Sequence
000001 GTGTGAAGAA GAGGCGAGAA CGACCCCCGG ACCGACCAAA GCCCGCGCGC CGCTGCATCC CGCGTCCAGC ACCTACGTCC 000080
000081 CGCTGCCGTC GCCGCCGCCA CCATGCCCAA GAGAAAGGCT GAAGGGGATG CTAAGGGAGA TAAAGCAAAG GTGAAGGACG 000160
000161 AAGTAAGTCA TTCTCTCTTC AAGGGTCAAA GCCTTGGACT AGCAGAGGCC ACTGGACTCG CCACAGAGAA GATCCGCGAG 000240
000241 GTTGTCTGCT AAACCTGCTC CTCCAAAGCC AGAGCCCAAG CCTAAAAAGG CCCCTGCAAA GAAGGGAGAG AAGGTACCCA 000320
000321 AAGGGAAAAA GGGAAAAGCT GATGCTGGCA AGGAGGGGAA TAACCCTGCA GAAAATGGAG ATGCCAAAAC AGACCAGGCA 000400
000401 CAGAAAGCTG AAGGTGCTGG AGATGCCAAG TGAAGTGTGT GCATTTTTGA TAACTGTGTA CTTCTGGTGA CTGTACAGTT 000480
000481 TGAAATACTA TTTTTTATCA AGTTTTATAA AAATGCAGAA TTTTGTTTTA CTTTTTTTTT TTTTTTAAAA GCTATGTTGT 000560
000561 TAGCACACAG AACACTTCAT TGTTGTTTTT GGGGGAAGGG GCATATGTCA CTAATAGAAT GTCTCCAAAG CTGGATTGAT 000640
000641 GTGGAGAAAA CACCTTTCCC TTCTAGTTTT GAGAGACTTC CTCTTGGCTC CCAGGAGGAG GGATTCCCTG ACTTTGACAC 000720
000721 ACATGGCCAC CTTGGCACAA AAGCCTTGTG GTATAGAAAA ACAAATTTGT TTTTATGTCC TCTTCTCCCT TTCCATCGTT 000800
000801 CAGCATAGAC TTAACTCCCT TAAGCCCAGA CATCTGTTGA GACCTGACCC CTA
[back to top]

Predicted Small Protein

Name NONHSAT001828_smProtein_341:469
Length 43
Molecular weight 5081.1673
Aromaticity 0.0952380952381
Instability index 67.330952381
Isoelectric point 10.1774291992
Runs 9
Runs residual 0.038125376733
Runs probability 0.0296080394119
Amino acid sequence MLARRGITLQKMEMPKQTRHRKLKVLEMPSEVCAFLITVYFW
Secondary structure LLLLLLLLHHHLLLLLLLLHHHHHHEELLHHHHHHHHEEEEL
PRMN -
PiMo -