NONHSAT001828
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT001828 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
853 nt |
Genomic location |
chr1+:26799002..26802059 |
Exon number |
6 |
Exons |
26799002..26799118,26799974..26800076,26800194..26800223,26800576..26800626,26801063..26801158,26801604..26802059 |
Genome context |
|
Sequence |
000001 GTGTGAAGAA GAGGCGAGAA CGACCCCCGG ACCGACCAAA GCCCGCGCGC CGCTGCATCC CGCGTCCAGC ACCTACGTCC 000080
000081 CGCTGCCGTC GCCGCCGCCA CCATGCCCAA GAGAAAGGCT GAAGGGGATG CTAAGGGAGA TAAAGCAAAG GTGAAGGACG 000160 000161 AAGTAAGTCA TTCTCTCTTC AAGGGTCAAA GCCTTGGACT AGCAGAGGCC ACTGGACTCG CCACAGAGAA GATCCGCGAG 000240 000241 GTTGTCTGCT AAACCTGCTC CTCCAAAGCC AGAGCCCAAG CCTAAAAAGG CCCCTGCAAA GAAGGGAGAG AAGGTACCCA 000320 000321 AAGGGAAAAA GGGAAAAGCT GATGCTGGCA AGGAGGGGAA TAACCCTGCA GAAAATGGAG ATGCCAAAAC AGACCAGGCA 000400 000401 CAGAAAGCTG AAGGTGCTGG AGATGCCAAG TGAAGTGTGT GCATTTTTGA TAACTGTGTA CTTCTGGTGA CTGTACAGTT 000480 000481 TGAAATACTA TTTTTTATCA AGTTTTATAA AAATGCAGAA TTTTGTTTTA CTTTTTTTTT TTTTTTAAAA GCTATGTTGT 000560 000561 TAGCACACAG AACACTTCAT TGTTGTTTTT GGGGGAAGGG GCATATGTCA CTAATAGAAT GTCTCCAAAG CTGGATTGAT 000640 000641 GTGGAGAAAA CACCTTTCCC TTCTAGTTTT GAGAGACTTC CTCTTGGCTC CCAGGAGGAG GGATTCCCTG ACTTTGACAC 000720 000721 ACATGGCCAC CTTGGCACAA AAGCCTTGTG GTATAGAAAA ACAAATTTGT TTTTATGTCC TCTTCTCCCT TTCCATCGTT 000800 000801 CAGCATAGAC TTAACTCCCT TAAGCCCAGA CATCTGTTGA GACCTGACCC CTA |
Predicted Small Protein
Name | NONHSAT001828_smProtein_341:469 |
Length | 43 |
Molecular weight | 5081.1673 |
Aromaticity | 0.0952380952381 |
Instability index | 67.330952381 |
Isoelectric point | 10.1774291992 |
Runs | 9 |
Runs residual | 0.038125376733 |
Runs probability | 0.0296080394119 |
Amino acid sequence | MLARRGITLQKMEMPKQTRHRKLKVLEMPSEVCAFLITVYFW |
Secondary structure | LLLLLLLLHHHLLLLLLLLHHHHHHEELLHHHHHHHHEEEEL |
PRMN | - |
PiMo | - |