NONHSAT001829
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT001829 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
932 nt |
Genomic location |
chr1+:26799008..26802117 |
Exon number |
6 |
Exons |
26799008..26799118,26799974..26800018,26800194..26800308,26800576..26800626,26801063..26801158,26801604..26802117 |
Genome context |
|
Sequence |
000001 AGAAGAGGCG AGAACGACCC CCGGACCGAC CAAAGCCCGC GCGCCGCTGC ATCCCGCGTC CAGCACCTAC GTCCCGCTGC 000080
000081 CGTCGCCGCC GCCACCATGC CCAAGAGAAA GGCTGAAGGG GATGCTAAGG GAGATAAAGC AAAGGTGAAG GACGAACCAC 000160 000161 AGAGAAGATC CGCGAGGTTG TCTGCTGTAA GTGTATGCTT TTGAATTTTC GTGCTTGTCC CTGAAACTAA AAAACATCAA 000240 000241 AAAACAATTC CCTTTGCTTC CATGAATTAT GAAACCTGCT CCTCCAAAGC CAGAGCCCAA GCCTAAAAAG GCCCCTGCAA 000320 000321 AGAAGGGAGA GAAGGTACCC AAAGGGAAAA AGGGAAAAGC TGATGCTGGC AAGGAGGGGA ATAACCCTGC AGAAAATGGA 000400 000401 GATGCCAAAA CAGACCAGGC ACAGAAAGCT GAAGGTGCTG GAGATGCCAA GTGAAGTGTG TGCATTTTTG ATAACTGTGT 000480 000481 ACTTCTGGTG ACTGTACAGT TTGAAATACT ATTTTTTATC AAGTTTTATA AAAATGCAGA ATTTTGTTTT ACTTTTTTTT 000560 000561 TTTTTTTAAA AGCTATGTTG TTAGCACACA GAACACTTCA TTGTTGTTTT TGGGGGAAGG GGCATATGTC ACTAATAGAA 000640 000641 TGTCTCCAAA GCTGGATTGA TGTGGAGAAA ACACCTTTCC CTTCTAGTTT TGAGAGACTT CCTCTTGGCT CCCAGGAGGA 000720 000721 GGGATTCCCT GACTTTGACA CACATGGCCA CCTTGGCACA AAAGCCTTGT GGTATAGAAA AACAAATTTG TTTTTATGTC 000800 000801 CTCTTCTCCC TTTCCATCGT TCAGCATAGA CTTAACTCCC TTAAGCCCAG ACATCTGTTG AGACCTGACC CCTAGTCATT 000880 000881 GGTTACCAGT GTGTCAGGCA ATCTGGACTT TCCAGTGATG CCACTGAGAT GG |
Predicted Small Protein
Name | NONHSAT001829_smProtein_659:874 |
Length | 72 |
Molecular weight | 8389.985 |
Aromaticity | 0.0704225352113 |
Instability index | 47.0973239437 |
Isoelectric point | 10.8981323242 |
Runs | 8 |
Runs residual | 0.0358784284655 |
Runs probability | 0.0388403108991 |
Amino acid sequence | MWRKHLSLLVLRDFLLAPRRRDSLTLTHMATLAQKPCGIEKQICFYVLFSLSIVQHRLNS LKPRHLLRPDP |
Secondary structure | LHHHHHHHHHHHHHHLLLLLLLLLLHHHHHHHHLLLLLLLLEEEEHHHHHHHHHHHHHHL LLLLLLLLLLL |
PRMN | - |
PiMo | - |