NONHSAT001830
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT001830 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
952 nt |
Genomic location |
chr1+:26799697..26802056 |
Exon number |
5 |
Exons |
26799697..26800018,26800194..26800223,26800576..26800626,26801063..26801158,26801604..26802056 |
Genome context |
|
Sequence |
000001 GTTTGCGCCA TCTGCAGCTG TTGCTCCTGC CTGTCGCGGT GGTGCGGGCT CCGCTGCCCT CCCCGGCTGC GCTCCGGTCC 000080
000081 AGCCCTCGCT TCTCGGGGTC GGCGAGCCGG AGCTCCTGCG CGCGCTTCGT TCTTATACGA ACGTCGGGCT CACTCATTTA 000160 000161 TGTCCTAGAA AAGTTGTGTG GACGACTGCT TTAATTTTCA TTTTTAGCAC TCTAAAGTTT GGGAAGTAAT TAAGAACCAC 000240 000241 CTCAAAATCT GCAGTTTTTT GTTCTTGTTT CTTATAGGCT GAAGGGGATG CTAAGGGAGA TAAAGCAAAG GTGAAGGACG 000320 000321 AACCACAGAG AAGATCCGCG AGGTTGTCTG CTAAACCTGC TCCTCCAAAG CCAGAGCCCA AGCCTAAAAA GGCCCCTGCA 000400 000401 AAGAAGGGAG AGAAGGTACC CAAAGGGAAA AAGGGAAAAG CTGATGCTGG CAAGGAGGGG AATAACCCTG CAGAAAATGG 000480 000481 AGATGCCAAA ACAGACCAGG CACAGAAAGC TGAAGGTGCT GGAGATGCCA AGTGAAGTGT GTGCATTTTT GATAACTGTG 000560 000561 TACTTCTGGT GACTGTACAG TTTGAAATAC TATTTTTTAT CAAGTTTTAT AAAAATGCAG AATTTTGTTT TACTTTTTTT 000640 000641 TTTTTTTTAA AAGCTATGTT GTTAGCACAC AGAACACTTC ATTGTTGTTT TTGGGGGAAG GGGCATATGT CACTAATAGA 000720 000721 ATGTCTCCAA AGCTGGATTG ATGTGGAGAA AACACCTTTC CCTTCTAGTT TTGAGAGACT TCCTCTTGGC TCCCAGGAGG 000800 000801 AGGGATTCCC TGACTTTGAC ACACATGGCC ACCTTGGCAC AAAAGCCTTG TGGTATAGAA AAACAAATTT GTTTTTATGT 000880 000881 CCTCTTCTCC CTTTCCATCG TTCAGCATAG ACTTAACTCC CTTAAGCCCA GACATCTGTT GAGACCTGAC CC |
Predicted Small Protein
Name | NONHSAT001830_smProtein_443:571 |
Length | 43 |
Molecular weight | 5081.1673 |
Aromaticity | 0.0952380952381 |
Instability index | 67.330952381 |
Isoelectric point | 10.1774291992 |
Runs | 9 |
Runs residual | 0.038125376733 |
Runs probability | 0.0296080394119 |
Amino acid sequence | MLARRGITLQKMEMPKQTRHRKLKVLEMPSEVCAFLITVYFW |
Secondary structure | LLLLLLLLHHHLLLLLLLLHHHHHHEELLHHHHHHHHEEEEL |
PRMN | - |
PiMo | - |