NONHSAT001947

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT001947

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

1325 nt

Genomic location

chr1-:28572187..28573511

Exon number

1

Exons

28572187..28573511

Genome context

Sequence
000001 ttgcagtgag ccgagaacgc gccactacac tccagcctgg acgacgagag tgatactccg tctcagtcaa tcaatcaatc 000080
000081 aatcaatcGT TTGATTTTCG TTTTATGCTT TTACTTCCAA ATTTATATTT ATTGCAAAAA ATGTGGAATA TAACAAAGTG 000160
000161 TAAAGGTGAA ACTGAAATAA CCCGAAATTA TATTTCCCCC TCTGTGGTTT TTTTTTTTCC GTCTCTGTGT TTTTCAATGT 000240
000241 TTTTCAGGCC TTCTGTCTTG AGCTCGTATT ACTgctgttc actgatgtat tgtaaaagcg taaaaccgga cgtgacccaa 000320
000321 atgtctatca aaggagactg atgagagaaa taaacggatt tgttcacaca acggcttcta cagcaaagaa acagaaggta 000400
000401 gctccaagtg ctctgaaatg gaaaggtatg caggatttcc tgttaggtta aaacagaacg aagcaaaaAC CGAGGTTGCG 000480
000481 CAATGATACA TATAGAACAG TCTCATAGTT GTATACATAG TTACACAGAG GAAACAAAGA TCTGGAAAGA TGTGTAGTTT 000560
000561 GCACCTGTTA CCATTGGTTA GCTCTGGGGT GGACGGAGAA GGGAGAAGTT TTAAGATTCT TTATATAATA CACTTATTTA 000640
000641 ATATCTATCT ATGTGCTAAG TTGTATTACA TTTGTTGTTT TTTAAAGAGA TCCTTTTAAA CAGAGAAGGG AGAACTCCCT 000720
000721 CAAATCCCAA TTGCACTACA AAGAGAAACC AACATGTTGG TTATTTTTAT AGCATATAAG TTTATATACC GTATTAATAa 000800
000801 tgtatagcta tatagcctgc tttttccact tagcacattt cataattttt gtaatattaa atattcctta aatataattg 000880
000881 ttaatggttg cagactattc atgtatgcta taatttatta atccttattg agaacattta gggttttctt cccaattttt 000960
000961 cacatatttc aagatgagat aaaactctta aataattata ttcctgatta attaaattcc tagaaaaatt cgtgagttga 001040
001041 agactatgaa caAATAAATT TAAGGCtttt ttttttttaa gagagggagt attgctgtgt tgcccaggtt ggtctcaaac 001120
001121 tcctgggctc acatgatcct cctgcttcag cctctggggt agctgggact acaggccact gcaccAGACT TTAACACTCT 001200
001201 TGggccaggc acggtggctc atgcctgtaa tcccagcact ttgggaggct gaggtgggcg gatcacctga ggtcaggagt 001280
001281 ttgaaaccag cctgaccaac atggggaaac cccgtctcta ctaaa
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Predicted Small Protein

Name NONHSAT001947_smProtein_104:340
Length 79
Molecular weight 9084.7737
Aromaticity 0.153846153846
Instability index 56.5461538462
Isoelectric point 8.89739990234
Runs 15
Runs residual 0.0586303939962
Runs probability 0.0525289995879
Amino acid sequence MLLLPNLYLLQKMWNITKCKGETEITRNYISPSVVFFFPSLCFSMFFRPSVLSSYYCCSL
MYCKSVKPDVTQMSIKGD
Secondary structure LLLLHHHHHHHHHHHHHLLLLLEEEEELEELLEEEEEELLLLEEEEEELLLLLEEEEEEE
EEEEELLLLLEEEEEELL
PRMN LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHHHLLLLL
LLLLLLLLLLLLLLLLLL
PiMo oooooooooooooooooooooooooooooooooTTTTTTTTTTTTTTTTTTTTTTiiiii
iiiiiiiiiiiiiiiiii