NONHSAT002390

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT002390

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

3783 nt

Genomic location

chr1+:36391433..36395210

Exon number

1

Exons

36391433..36395210

Genome context

Sequence
000001 GCTGGGTTAT TTCTATGCAT GGGGGTAAGA AGGCTCAGAG AAGGATCCTG GCGGATACCC CAGTGAGAAA TCGTCAGTGG 000080
000081 CAGCCAGTGT GTACATACGT GGACCTAGCA TTCCTCTGGA GGCCAAGTGT TGTAAATTGG CCTGTGGCTA TCATCTGGCA 000160
000161 GACTCCCTTG GGAAAGAGCC AGCCAGCCCC ATGCTTCTTT TCAGCAGCAA GGGTTAGGGA GGTTGGTTGA ACTTGAAGAG 000240
000241 CAGATTGGAC ATGGAGCAGA TTTTGACCAG TTGAAATAAG ACATAAATTT ATGACTCCGA GTGAGGCAGA AATAAAGAAC 000320
000321 TTAGCAGGGG GAATAGGAGG AGGATGATTA TGGCAAATTT TGCTATAAAC TTTAGTTTTA GAAAAGATTG ATATTGAAAA 000400
000401 GCCTTCAGGA TTTGCCTGTG GTTGCTACTC AAGTTAAAAA GACTGGGAGC CTGCATTGTT TGGTCCTGGA GCTCAAGGTT 000480
000481 TTCAGTGAAG GCTTGTCCTG GCACCTCTGG GCATTCCTTT TCATTACTGG TTGAGCATCC TTCCTTCTGC TCTGTCAATT 000560
000561 GGCAAAATAT GCTGGAGCAC ATTCTGGACT AGCAGTTGCC TTGGGGTAGT CAGGCTGGGT ATTTGTTTGG TATCTCTTGG 000640
000641 TGTAGCAGAC CCCAGAATCT CATGGCAATT AGGATTTGGT GGCTAAACGA AAGAGTTAGT GCAAGGAAAA GCCTAGTTGG 000720
000721 AATTTCTGAG TCTGGGCCAT CCTTAAGCTG CTGTCTACTG CCTGAATGGG AAGTAATGTC GAATTGGAAA ATTAGCTCAC 000800
000801 CATTTTTGTT CTAGCTTTGC AGACATTTAT TCCTCTGATG ATAGGCTGAG AAATGCCTAG GCCGGCTTAG AAGGCACACA 000880
000881 GCATGACAGA AGTACTCCTT CAAAGCAGCT GTGTCAAGAA GGAAGAGCTG GAAAAGTGGA TTTGCTGGGG AATTAGATGC 000960
000961 ATTTAGTTTT CCACTTACGC ACAACTGCCT TCTCCAGTAT ATCATACCAA GGTTTTTTAG GCCTTTGTGG CTTACCCTGC 001040
001041 AGGAACATAC TGTGTCCTGT TGTTCTGGAC TGTAGCATCT TCACCACCAT CCTCTTGGCA ATGGTTTTTT GTTTGGGGTT 001120
001121 TTTTTTTTTT TTTTTTTGGA CAAAGTATAA TAATATTGAG GGACCTTTCT AGGGAGCCTT TGGTCCTTTG TCCCCATTTT 001200
001201 CCAAAGGGAG GGAACTTTCC TCTTAAAAGA GACAGTGGGA ACTTTTAGCC AGGTTTTTGG AAAAGGCCTG TGGGCTATTA 001280
001281 ATGAGAGTGA GCTGCAAAAG GAGGAAGGGT TTGTTTGGGT ACTTTGAAGT ACTTAGCTAG GTGTTTTCTA CAGTATCTTA 001360
001361 TATAATTGCA TCTTACAGCA TCTTTACATG CGAAATAGTT TATCAGTTAT CTTCAATTGC ATATTACAAA ATTCTGATTA 001440
001441 AATTTTTCTT AAATAAGAAA ACTATCATTT CATATGACAA GAAATCCTAA TTTAATGTTA CTCCAAGGTT GGTTAATTCA 001520
001521 GTGGCTCAGT GATAACACCA AAGACTCAGT TTCTTGAAAT TTTTTTGCTC TGCCATCCTC CATGTTTATC CTCACGCCAG 001600
001601 TTCGCCTCAT GGTCCCAATA TGGCTACTGT AGTTCTGGGA AGGAAATGCT GACAGAACCG TGTCTGGCAA AAGAGAGACA 001680
001681 GATTTTTCTG TGTCCTTCTA AAGCAAGGAA GTCTTCCCCT GGAAGCTCCA GCAGATACGG CCTCATGGCT TTGCTAGAAA 001760
001761 TGGGTCATCT CACTCCTGTC ATTGGCAAAG CAAGTAAGAT CATCCATCAG GAGTGGCTTA GATTAATGAA TTATCCTTTG 001840
001841 AGTCGTGTAG ACTAGAAAGT TCAGTCATGT CTACTAGCAA GAAAGGAGAT AAGGGCTGTT GGATAAGCAG CATCTGGTCT 001920
001921 CAAAGGTACT TCAACTTTTA CAGATGAGAA ACATGAATCA GAGTGACTTT CCCAGGCTCA CAGCAAGTAA GAGAGGGCCT 002000
002001 TCAGTGTTAG CTGTGTCTGT CCCTAAAGCC CATGTTTTAT ATTGTATCTT GCTAGAGTAT AAAGTAACTT ACTTTCTACC 002080
002081 TTGTAGAAAC TGATGGTCTA GGAGAAGAGA TTTGAACTCA GGTGCCCAGT TGACTCTAAT CTTGGCCCAT GTGAGAGGAT 002160
002161 TGTACTCAGT TGCTCTCCTC ATCCAGTGAT GTTTCTTGTC TAACACAAGA AGCCTAGGAG TAGAAAGTCC TAAGCAGAGT 002240
002241 AGAATAATAG CGGCAGCAGG GAGGGAAGTG TGAACTGTGT GTCCCTGAGC CTGACTTACT GGGCAGGGAC ATGACACTTA 002320
002321 AAGCGGCAGC TGGCCACTCT GTCTTTCCTG CATGCACTGA GTATTTGGTA GCTCATTAGT GACCAGTGAT ATTGATCATC 002400
002401 TTTTCATGTG CTCACCTACT ATCCCCATAT CTTTGTTGTT TGCATCTTTT ACCCATTGTA TTTGTTGTTT TTGAGACAGT 002480
002481 GTCTCACTCT GTCACCCAGG CTGGAGTGCA GTCTCATGAT CGCGGCTCAC TGCAGTTTCT GCCTCCTGGG CTCAAGCAAT 002560
002561 CCTCCCACCT CAGCCTCCTG AGTAGCTGGG CTTACAGGCG CACACCACCA TGCCCAGCTA ATTAAAAAAA AAATTTTTTT 002640
002641 TGTAGCAGTT CGGTCTCATT AGTATTGCCC AGGCTGGCCT CTCTTAGCTT CAAGCTATCC TCCCGCCTCG GCCTCCCAAA 002720
002721 GTGCTGGAAT TACAGGCATA AGCCACAAGC CACTGGGCCC AGCCTCTTTT ACCTGTTTCA AAATTGAGTT TTATTGAGTT 002800
002801 GTAAGAGTTC TTTATTCATT TTAAACACAA GTCCTTTGTT GGATATATCT TTTACATCTA TTTTTCCCAG TCTGTGGCTT 002880
002881 GCCTTTTCAT TTTGAAGAGC AAAAGTTTAA AATTTTGTGA ATTTATTAAA GCTCCGTTTG TTGCTTTTTT CTGTTCTAGT 002960
002961 TTATACTTTT GTATCATATT TTAGGAAATT TTGCACTGGG TATTTGATGG CTCCTGAGGA GGTTCAACTT TCAGAGCGCA 003040
003041 CTGATTTCTC TGCACCTGAG ATTTTGTACT ATTTCTGTAT TTCTTTCTTC TCAGAACAAC CAGTGTCACC AGGTATGAGG 003120
003121 GCAGAGTTTT AGCTTGTTTG CTGAGCCCCA TTCTTGAAGC TCATTTATTT ATTCACCTAT CTGTCCATCA ATCCAACAAA 003200
003201 TATACTGAAT GCTGCTATGT GCCAGGTACT GGCACTGTTC TAGGTACTGG GGCAATGACA GTTAAGATAA TACCCAATGA 003280
003281 CCCTGCTCTG TACCCTTAAG AGCAGACTCA GTTGGGAATG AGTTATCCAA ATATAGGGTG TACATGTAGT CAGGAGAGAG 003360
003361 CCTCATACAG CTTTGCCTTT GGCAGAATCC TTCAAACCTC TTTGTCTTCC TACTTCTTGA TATTACAAAT CATGAGCCTT 003440
003441 TCACATGCAT TGACTCTAAA GAGGTGGGTT CCTGGATAGC AGAAGTAGAT AGGAAGGCAT CATTGACATT TACTGAGATG 003520
003521 GATTGAATCA GAGGGTGTAA ATTCTGCTCC ATCAATGTTG AAAAAGACTA GCCCACCCCA AAGGTTTATC ACTGTCACCA 003600
003601 TGTCTAATGT CTATTCTGGA AGAAGCTGAA GAAGTCTGCC TTTGTTTAGG GAACCGGTTC CAGAATCAGA GGGGTTGAGG 003680
003681 ATATAAAAGA CCCTTGCACA AGAGTTGGTA TTTACCCTGT CAGATGCTGC TACCAAGATT TGGATTGTGT ACAGTCGAGG 003760
003761 ATTAAAAATG ACTTTTAAGA TGC
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Predicted Small Protein

Name NONHSAT002390_smProtein_14:229
Length 72
Molecular weight 8103.3791
Aromaticity 0.112676056338
Instability index 56.9492957746
Isoelectric point 10.8792114258
Runs 11
Runs residual 0.00637509266123
Runs probability 0.0418091888681
Amino acid sequence MHGGKKAQRRILADTPVRNRQWQPVCTYVDLAFLWRPSVVNWPVAIIWQTPLGKSQPAPC
FFSAARVREVG
Secondary structure LLLLHHHHHHHHLLLLLLLLLLLEEEEEEEEEEEELLLEELLLEEEEEELLLLLLLLLLL
LLLLEEEEELL
PRMN LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLL
LLLLLLLLLLL
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